FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0164.ptfa, 763 aa vs ./tmplib.26680 library 1768254 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.1540+/-0.00736; mu= -8.4123+/- 0.487 mean_var=321.7202+/-77.391, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.0715 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4021 ( 957 res) mfj33210 ( 957) 860 103 1.9e-22 >>mKIAA4021 ( 957 res) mfj33210 (957 aa) initn: 601 init1: 307 opt: 860 Z-score: 495.3 bits: 102.7 E(): 1.9e-22 Smith-Waterman score: 1372; 37.042% identity (39.918% ungapped) in 791 aa overlap (1-754:179-949) 10 20 30 mKIAA0 KRRGSQEKQTKKAEGEPQEESPLKSKSQEE ::....::.... ...:.. . ....: mKIAA4 SRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAG-DNQGDEA 150 160 170 180 190 200 40 50 60 70 80 90 mKIAA0 PKDTFEHDPSESIDEFNKSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPM ..:: :..: :.. :. :: ..: . : : : .. : . : .:. mKIAA4 KEQTFSGGTSQDI----KGSESSKPWPDATTYGAGSASRASVSDLS--PRERSPALKSPL 210 220 230 240 250 260 100 110 120 130 140 mKIAA0 LSTV---HSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKT :.: .: . .: . . . :: :...:.. : .... . : . ::.: mKIAA4 QSVVVRRRSPRPSPVPKPSPPLSNASQMGS-SMSGGAGYQSGAHQGQFDHGSGSLSPSKK 270 280 290 300 310 320 150 160 170 180 190 200 mKIAA0 ITPQNAPREESRGRSSFYPEGDQETAKTG--KFLKRFTDEESRVFLLDRGNIRDKEAPKE ..: . : :.. .:.: .: . ::. .:.. :. . .. .: :: mKIAA4 SPVGKSP--PATG-SAYGSSQKEESAASGGAAYSKRYLEEQKTENGKDKEQ-KQTNADKE 330 340 350 360 370 210 220 230 240 250 260 mKIAA0 KGSEKGRADGDWDDQEVLDYFSDKESAKQKFHDSEGDDTEET-EDYRQ----FRKSVLAD : .::: . .: : . : :. : .... :. :.. . .:... :.: : . mKIAA4 KLKEKG-GFSDADVKMKSDPFAPKTDSEKPFRGSQSPKRYKLRDDFEKKMADFHKEELDE 380 390 400 410 420 430 270 280 290 300 310 mKIAA0 QGKSFATSSHRNTEEEGPKYKSKV---SLKGNRESDGFREEKNYKLKETAYIVER----P . :. . . .. .. ::. ::: . :...: . . :. . :: .:. : mKIAA4 HDKDKSKGRKEPEFDDEPKFMSKVIAGASKNQEEEKSGKWESLHTGKEKQRKAEEMEDEP 440 450 460 470 480 490 320 330 340 350 360 370 mKIAA0 STAKDKHKEEDKGSDRITVKKEVQSPEQ---VKSEKLKELFDYSPPLHKSLDAREKSIFR : ... ::: :: : .. ::. : . : . . ::: .:. ..:.: . mKIAA4 FTERSR-KEERGGSKRSESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGSK 500 510 520 530 540 550 380 390 400 410 420 mKIAA0 EESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASL-TKDRLLASTLVHSVKKEQEFRS . : : ... .:...: .: ::..: ...: : :::: :::::::: mKIAA4 GDFS-SGKSSFSITREAQVNVRMDSFD-EDLARPSGLLAQERKLCRDLVHSNKKEQEFRS 560 570 580 590 600 610 430 440 450 460 470 480 mKIAA0 IFDHIKLPQANKSTSESFIQHIVSLVHHVKEQYFKSPAVTLNERFTSY-QKATEEHSTR- ::.::. :...: :: : ::::..::::::..: : ..::.::::.: ....:..... mKIAA4 IFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGNEQEAAKN 620 630 640 650 660 670 490 500 510 520 530 540 mKIAA0 QKSPEIHRRIDISPSALRKHTRLAGEERGFKEEIQKGDKKLRCDSADLRHDIDRRRK--E .::::::::::::::..::: : .. .: :.. : . : .::: ::.::.: : mKIAA4 KKSPEIHRRIDISPSTFRKHGLTHEELKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKE 680 690 700 710 720 730 550 560 570 580 590 600 mKIAA0 RSKERGDSK---GSRESSGSRKQEKTPKDYKEYKPYKDDSKHKGRERDHSRSSSSSASPS :. .:: :. ::.:: ::.. .: : : .: : ..::. : ::.:::::::.. : mKIAA4 RDLKRGKSRESVDSRDSSHSRER-STEKTEKTHKGSKKQKKHR-RARDRSRSSSSSSQSS 740 750 760 770 780 790 610 620 630 640 650 mKIAA0 -SPSSREEKESKKEREEEF----KTHHEMKDYSGFAGVS-RPRGTF-FRIRGRGRARGVF : ...: : .:::: :.. ::. : . : :::: :: :::: .:: . mKIAA4 HSYKAEEYPEEAEEREESTSGFDKSRLGTKDFVGPNERGGRARGTFQFRARGRGWGRGNY 800 810 820 830 840 850 660 670 680 690 700 710 mKIAA0 AGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRD-DGVDYWAKRGRGRGTFQR .:.:. ::::. :::: .:::::::::::::::.:::::. .: : : ::::::.: : mKIAA4 SGNNN--NNSNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGSDKWMGRGRGRGAFPR 860 870 880 890 900 720 730 740 750 760 mKIAA0 GRGRFNFKKSGSSPKWTHDKYQGD-GIVEDDEETMENNEEKKDRRKEEKE ::::: :.::..::::.:::..:. : .:::: :: ::: mKIAA4 GRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDSLQPSAE 910 920 930 940 950 763 residues in 1 query sequences 1768254 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:13:33 2006 done: Mon Mar 27 10:13:34 2006 Scan time: 0.880 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]