# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg09509.fasta.nr -Q ../query/mKIAA4016.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4016, 465 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918209 sequences Expectation_n fit: rho(ln(x))= 5.1321+/-0.000182; mu= 11.4707+/- 0.010 mean_var=69.2842+/-13.677, 0's: 33 Z-trim: 59 B-trim: 1504 in 1/63 Lambda= 0.154084 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|12846081|dbj|BAB27022.1| unnamed protein produc ( 480) 3075 692.6 5.8e-197 gi|74204326|dbj|BAE39918.1| unnamed protein produc ( 480) 3065 690.3 2.7e-196 gi|74212014|dbj|BAE40175.1| unnamed protein produc ( 480) 3063 689.9 3.7e-196 gi|14548301|sp|Q9CZ13.1|QCR1_MOUSE RecName: Full=C ( 480) 3055 688.1 1.3e-195 gi|81884378|sp|Q68FY0.1|QCR1_RAT RecName: Full=Cyt ( 480) 2955 665.9 6.2e-189 gi|149728684|ref|XP_001498993.1| PREDICTED: simila ( 480) 2821 636.1 5.8e-180 gi|90075616|dbj|BAE87488.1| unnamed protein produc ( 480) 2785 628.1 1.5e-177 gi|73985642|ref|XP_851209.1| PREDICTED: similar to ( 480) 2784 627.9 1.7e-177 gi|92090651|sp|P31930.3|QCR1_HUMAN RecName: Full=C ( 480) 2780 627.0 3.2e-177 gi|515634|gb|AAA20046.1| ubiquinol-cytochrome c re ( 480) 2774 625.7 8.1e-177 gi|75773788|gb|AAI04501.1| UQCRC1 protein [Bos tau ( 478) 2757 621.9 1.1e-175 gi|92110045|ref|NP_001035208.1| ubiquinol-cytochro ( 480) 2757 621.9 1.1e-175 gi|10720406|sp|P31800.2|QCR1_BOVIN RecName: Full=C ( 480) 2756 621.7 1.3e-175 gi|194041191|ref|XP_001926664.1| PREDICTED: simila ( 480) 2756 621.7 1.3e-175 gi|4139392|pdb|1BGY|A Chain A, Cytochrome Bc1 Comp ( 446) 2664 601.2 1.7e-169 gi|3891848|pdb|1QCR|A Chain A, Crystal Structure O ( 446) 2663 601.0 2e-169 gi|114586719|ref|XP_516440.2| PREDICTED: ubiquinol ( 594) 2632 594.2 3e-167 gi|126335781|ref|XP_001367487.1| PREDICTED: simila ( 481) 2507 566.3 5.9e-159 gi|3659967|pdb|1BCC|A Chain A, Cytochrome Bc1 Comp ( 446) 2506 566.1 6.5e-159 gi|149635472|ref|XP_001506033.1| PREDICTED: simila ( 506) 2479 560.1 4.6e-157 gi|50754375|ref|XP_414356.1| PREDICTED: similar to ( 478) 2230 504.7 2e-140 gi|29351607|gb|AAH49288.1| Uqcrc1 protein [Xenopus ( 478) 2208 499.8 6e-139 gi|196049775|pdb|3CWB|A Chain A, Chicken Cytochrom ( 446) 2194 496.7 4.9e-138 gi|194374129|dbj|BAG62377.1| unnamed protein produ ( 365) 2187 495.1 1.2e-137 gi|224066099|ref|XP_002198007.1| PREDICTED: simila ( 481) 2145 485.8 1e-134 gi|89267876|emb|CAJ83320.1| ubiquinol-cytochrome c ( 478) 2137 484.1 3.4e-134 gi|47218978|emb|CAG02016.1| unnamed protein produc ( 478) 2066 468.3 1.9e-129 gi|18496665|gb|AAL74192.1|AF465782_1 ubiquinol-cyt ( 477) 2026 459.4 9.1e-127 gi|37589778|gb|AAH59705.1| Ubiquinol-cytochrome c ( 474) 1983 449.8 6.8e-124 gi|47123260|gb|AAH70011.1| Ubiquinol-cytochrome c ( 474) 1983 449.8 6.8e-124 gi|210087603|gb|EEA35972.1| hypothetical protein B ( 481) 1910 433.6 5.3e-119 gi|126340495|ref|XP_001371284.1| PREDICTED: simila ( 560) 1889 429.0 1.5e-117 gi|115942950|ref|XP_001176813.1| PREDICTED: simila ( 476) 1872 425.1 1.8e-116 gi|47939684|gb|AAH72067.1| MGC78954 protein [Xenop ( 479) 1845 419.1 1.2e-114 gi|85701142|sp|Q3SZ71.1|MPPB_BOVIN RecName: Full=M ( 490) 1841 418.3 2.2e-114 gi|118082064|ref|XP_415962.2| PREDICTED: similar t ( 487) 1838 417.6 3.5e-114 gi|116063388|gb|AAI23110.1| MGC78954 protein [Xeno ( 479) 1837 417.4 4e-114 gi|224093029|ref|XP_002188307.1| PREDICTED: hypoth ( 524) 1837 417.4 4.3e-114 gi|89268963|emb|CAJ83610.1| peptidase (mitochondri ( 479) 1836 417.1 4.7e-114 gi|193785480|dbj|BAG50846.1| unnamed protein produ ( 489) 1833 416.5 7.6e-114 gi|3342006|gb|AAC39915.1| mitochondrial processing ( 489) 1832 416.3 8.9e-114 gi|29840827|sp|O75439.2|MPPB_HUMAN RecName: Full=M ( 489) 1832 416.3 8.9e-114 gi|149704558|ref|XP_001488876.1| PREDICTED: simila ( 490) 1832 416.3 8.9e-114 gi|194666119|ref|XP_001789518.1| PREDICTED: simila ( 490) 1832 416.3 8.9e-114 gi|73981963|ref|XP_533104.2| PREDICTED: similar to ( 513) 1831 416.1 1.1e-113 gi|111306188|gb|AAI21601.1| Peptidase (mitochondri ( 479) 1830 415.8 1.2e-113 gi|158260751|dbj|BAF82553.1| unnamed protein produ ( 489) 1826 414.9 2.2e-113 gi|397699|dbj|BAA03007.1| mitochondrial processing ( 487) 1824 414.5 3e-113 gi|75042519|sp|Q5REK3.1|MPPB_PONAB RecName: Full=M ( 489) 1824 414.5 3.1e-113 gi|40226469|gb|AAH14079.2| PMPCB protein [Homo sap ( 480) 1823 414.3 3.5e-113 >>gi|12846081|dbj|BAB27022.1| unnamed protein product [M (480 aa) initn: 3075 init1: 3075 opt: 3075 Z-score: 3692.4 bits: 692.6 E(): 5.8e-197 Smith-Waterman score: 3075; 100.000% identity (100.000% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::::::::::::::::::::::::::::::::::::::::::: gi|128 MAASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|74204326|dbj|BAE39918.1| unnamed protein product [M (480 aa) initn: 3065 init1: 3065 opt: 3065 Z-score: 3680.4 bits: 690.3 E(): 2.7e-196 Smith-Waterman score: 3065; 99.785% identity (99.785% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::::::::::::::::::::::::::::::::::::::::::: gi|742 MAASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|742 NVVFDYLHATAFQGTPLAQAVEGPSENVRGLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|74212014|dbj|BAE40175.1| unnamed protein product [M (480 aa) initn: 3063 init1: 3063 opt: 3063 Z-score: 3678.0 bits: 689.9 E(): 3.7e-196 Smith-Waterman score: 3063; 99.355% identity (100.000% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::::::::::::::::::::::::::::::::::::::::::: gi|742 MAASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NVTLKVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY :::::::::::.:::::::::::.:::::::::::::::::::::::::::::::::::: gi|742 DAMSIDDMVFFMQGQWMRLCTSAAESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|14548301|sp|Q9CZ13.1|QCR1_MOUSE RecName: Full=Cytoc (480 aa) initn: 3055 init1: 3055 opt: 3055 Z-score: 3668.4 bits: 688.1 E(): 1.3e-195 Smith-Waterman score: 3055; 99.570% identity (99.785% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::::::::::::::::::::::::::::::::::::::::::: gi|145 MAASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|145 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRNYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|145 NVTLQVANAIIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|81884378|sp|Q68FY0.1|QCR1_RAT RecName: Full=Cytochr (480 aa) initn: 2955 init1: 2955 opt: 2955 Z-score: 3548.3 bits: 665.9 E(): 6.2e-189 Smith-Waterman score: 2955; 95.259% identity (98.922% similar) in 464 aa overlap (2-465:17-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA :::: :::::::::::::::::.::::::::::::.:::::::: gi|818 MAASAVCRAACSGTQALLRTCRSPALLRLPALRGTATFVQALQSVPETQVSVLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::: :::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|818 SEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|818 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERDVILREMQENDASMQ 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::.:: gi|818 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKAPRMVLAAAGGVKHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD ::::::: :.::::.::::::::..::::::::::::::::::::::::::::::::::: gi|818 QLLDLAQDHFSSVSQVYEEDAVPSITPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::.::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|818 NVALQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSETGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|818 DAMSIDDMIFFLQGQWMRLCTSATESEVTRGKNILRNALISHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF :::::::::::::.::::::.:..::::::::::::::::::::: :::::::::::::: gi|818 GRRIPLAEWESRIEEVDAQMVREVCSKYFYDQCPAVAGYGPIEQLSDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|149728684|ref|XP_001498993.1| PREDICTED: similar to (480 aa) initn: 2821 init1: 2821 opt: 2821 Z-score: 3387.3 bits: 636.1 E(): 5.8e-180 Smith-Waterman score: 2821; 90.323% identity (97.634% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA :::.: ::::::: ::::::::::::::::::::::.:::::::: gi|149 MAASAVCWAACCGTRVLLHTCRSPALLRSPALRGTATFAQALQSVPETQVSLLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::. :::::::::.:::::::::::::::.::::::::::::::::::::::.:::: gi|149 SEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::: ::::::::::.:::::::::: :::::::::::::::.:.:::::::. gi|149 NAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDASMR 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ .::::::::::::::::::::::::::::.:::.:::.::.::::::::::::::::::. gi|149 DVVFDYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGVEHR 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::.::.: .: ::::: :.:::::::::::::::::::::::::::::::::: gi|149 QLLDLAQKHFSSISGTYTEDAVPTLAPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::.::::::::::::::::::.::::::::::::::::::::::.: :..:::::::::: gi|149 NVALQVANAIIGHYDCTYGGGTHLSSPLASVAVANKLCQSFQTFSICYAETGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY : ::::::.:::::::::::::::::::.::::::::::::::::::::::::::::::: gi|149 DRMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF ::::::::::::: ::::...:..::::.:::::::::.::::::::::::::::::::: gi|149 GRRIPLAEWESRIAEVDASVVREVCSKYLYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|90075616|dbj|BAE87488.1| unnamed protein product [M (480 aa) initn: 2785 init1: 2785 opt: 2785 Z-score: 3344.0 bits: 628.1 E(): 1.5e-177 Smith-Waterman score: 2785; 89.247% identity (96.989% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::.::::.::: ::::.::::::::: :::::::.:::::::: gi|900 MAASVVCRAATSGAQVLLRARRSPTLLRTPALRSTATFAQALQFVPETQVSLLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::. :::::::::.:::.:::::::::::::::::::::::::.::::::::.:::: gi|900 SEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::: :::::::::::::::.::::: :::::::::::::::::::::::::. gi|900 NAYSTREHTAYYIKALSKDLPKVVELLGDIVQNCSLEDSQIEKERDVILREMQENDASMR 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ .::::::::::::::::::::::::::::.:::.:::.:.. :::::::::::::::::: gi|900 DVVFDYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYFSTHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD ::::::::::... .: ::.::.:::::::::::::::::::.:::::::::::::.:: gi|900 QLLDLAQKHLGDIPWTYAEDTVPALTPCRFTGSEIRHRDDALPFAHVAIAVEGPGWASPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::.::::::::::::::::::::::::::: :::::::::::::.: :.::::::::::: gi|900 NVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYADTGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY : :.::::.: :::::::::::::::::.::::::::::::::::::::::::::::::: gi|900 DRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF ::::::::::::: ::::...:.:::::.::::::::::::::::::::::::::::::: gi|900 GRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|73985642|ref|XP_851209.1| PREDICTED: similar to ubi (480 aa) initn: 2784 init1: 2784 opt: 2784 Z-score: 3342.8 bits: 627.9 E(): 1.7e-177 Smith-Waterman score: 2784; 89.247% identity (96.989% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA :::::::: .::: ::::.:::::::::::::::::.:::::::: gi|739 MAASAVCRAAGAGTRVLLRTRRSSSLLRSPALRSTATFAQALQSVPETQVSLLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::. :::::::::.::::::::::::::::::::::::::::::::::::::.:::: gi|739 SEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESMGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::: ::::::::::.:::::::::: :::::::::::::::.:.::::: :. gi|739 NAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDACMR 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ .:::::::::::::::::::::::: :::.:::.:::.::.::::::::::::::::::. gi|739 DVVFDYLHATAFQGTPLAQAVEGPSGNVRKLSRADLTEYLSRHYKAPRMVLAAAGGVEHR 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD :::::::::.::::..: ::.:: :.:::::::::::::::::::::::::::::::::: gi|739 QLLDLAQKHFSSVSETYTEDTVPTLAPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::.:::::::::::::::::..:::::::.:.::.::::::::::: :..:::::::::: gi|739 NVALQVANAIIGHYDCTYGGSTHLSSPLAAVSVAKKLCQSFQTFNICYAETGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY : :.::::.::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|739 DRMNIDDMMFFLQGQWMRLCTSATESEVLRGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF ::::::::::::: ::::...:..:::::::::::::: ::::::::::::::::::::: gi|739 GRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|92090651|sp|P31930.3|QCR1_HUMAN RecName: Full=Cytoc (480 aa) initn: 2780 init1: 2780 opt: 2780 Z-score: 3338.0 bits: 627.0 E(): 3.2e-177 Smith-Waterman score: 2780; 89.247% identity (96.774% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::.:::::::: ::::.::::::::: :::::::.:::::::: gi|920 MAASVVCRAATAGAQVLLRARRSPALLRTPALRSTATFAQALQFVPETQVSLLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::. :::::::::.:::.:::::::::::::::::::::::::.::::::::.:::: gi|920 SEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::: ::::::::::.::::.::::: :::::::::::::::::::::::::. gi|920 NAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVILREMQENDASMR 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ .:::.::::::::::::::::::::::::.:::.:::.::. :::::::::::::::::: gi|920 DVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD ::::::::::... .: ::::: :::::::::::::::::::.:::::::::::::.:: gi|920 QLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAIAVEGPGWASPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC ::.::::::::::::::::::::::::::: :::::::::::::.: :..:::::::::: gi|920 NVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY : :.::::.: :::::::::::::::::.::::::::::::::::::::::::::::::: gi|920 DRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF ::::::::::::: ::::...:.:::::.::::::::::::::::::::::::::::::: gi|920 GRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 >>gi|515634|gb|AAA20046.1| ubiquinol-cytochrome c reduct (480 aa) initn: 2774 init1: 2774 opt: 2774 Z-score: 3330.8 bits: 625.7 E(): 8.1e-177 Smith-Waterman score: 2774; 89.032% identity (96.774% similar) in 465 aa overlap (1-465:16-480) 10 20 30 40 mKIAA4 VLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVA ::::.:::::::: ::::.::::::::: :::::::.:::::::: gi|515 MAASVVCRAATAGAQVLLRARRSPALLRTPALRSTATFAQALQFVPETQVSLLDNGLRVA 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA4 SEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHL :::::. :::::::::.:::.:::::::::::::::::::::::::.::::::::.:::: gi|515 SEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA4 NAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQ ::::::::::: ::::::::::.::::.::::: :::::::::::::::::::::::::. gi|515 NAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVILREMQENDASMR 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA4 NVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ .:::.::::::::::::::::::::::::.:::.:::.::. :::::::::::::::::: gi|515 DVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA4 QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD ::::::::::... .: ::::: :::::::::::::::::::.:::::::::::::.:: gi|515 QLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAIAVEGPGWASPD 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA4 NVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVC .:.::::::::::::::::::::::::::: :::::::::::::.: :..:::::::::: gi|515 SVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFVC 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA4 DAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTY : :.::::.: :::::::::::::::::.::::::::::::::::::::::::::::::: gi|515 DRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTY 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA4 GRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF ::::::::::::: ::::...:.:::::.::::::::::::::::::::::::::::::: gi|515 GRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 430 440 450 460 470 480 465 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 02:02:48 2009 done: Tue Mar 17 02:09:39 2009 Total Scan time: 925.570 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]