# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg09268.fasta.nr -Q ../query/mKIAA1086.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1086, 454 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919966 sequences Expectation_n fit: rho(ln(x))= 5.4263+/-0.000192; mu= 10.8979+/- 0.011 mean_var=89.6074+/-17.140, 0's: 50 Z-trim: 57 B-trim: 194 in 1/67 Lambda= 0.135488 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148699496|gb|EDL31443.1| mCG134265, isoform CRA ( 804) 2545 507.6 4.7e-141 gi|148699498|gb|EDL31445.1| mCG134265, isoform CRA ( 815) 2545 507.6 4.8e-141 gi|148699495|gb|EDL31442.1| mCG134265, isoform CRA ( 858) 2545 507.6 4.9e-141 gi|148699497|gb|EDL31444.1| mCG134265, isoform CRA ( 869) 2545 507.6 5e-141 gi|163954931|ref|NP_001030067.2| zinc finger RNA b ( 874) 2545 507.6 5e-141 gi|109480165|ref|XP_234923.4| PREDICTED: similar t ( 822) 2303 460.3 8.3e-127 gi|130492454|ref|NP_055989.1| zinc finger RNA bind ( 939) 1426 288.9 3.7e-75 gi|160395566|sp|Q9UPR6.2|ZFR2_HUMAN RecName: Full= ( 939) 1426 288.9 3.7e-75 gi|119589688|gb|EAW69282.1| hCG23534, isoform CRA_ ( 926) 1394 282.6 2.8e-73 gi|119589689|gb|EAW69283.1| hCG23534, isoform CRA_ ( 940) 1394 282.6 2.8e-73 gi|73987441|ref|XP_854814.1| PREDICTED: similar to ( 917) 1357 275.4 4.2e-71 gi|149034443|gb|EDL89180.1| rCG29391, isoform CRA_ ( 316) 1252 254.5 2.9e-65 gi|126323186|ref|XP_001374007.1| PREDICTED: simila (1083) 1199 244.6 9.3e-62 gi|189534733|ref|XP_001922999.1| PREDICTED: wu:fb9 (1003) 1018 209.2 3.9e-51 gi|148726070|emb|CAN87812.1| novel protein [Danio (1010) 1018 209.2 4e-51 gi|197245556|gb|AAI68503.1| Unknown (protein for M ( 591) 1010 207.4 7.9e-51 gi|194668821|ref|XP_875807.3| PREDICTED: similar t ( 999) 940 193.9 1.5e-46 gi|157012489|gb|EAA01041.4| AGAP001905-PA [Anophel ( 730) 716 150.0 1.8e-33 gi|149579523|ref|XP_001519740.1| PREDICTED: simila ( 619) 712 149.2 2.8e-33 gi|108875868|gb|EAT40093.1| double-stranded RNA-bi ( 884) 694 145.8 4.2e-32 gi|73968135|ref|XP_863842.1| PREDICTED: similar to ( 640) 654 137.8 7.4e-30 gi|73953896|ref|XP_854104.1| PREDICTED: similar to (1065) 646 136.5 3.2e-29 gi|114600784|ref|XP_001154962.1| PREDICTED: zinc f (1029) 634 134.1 1.6e-28 gi|189241819|ref|XP_971611.2| PREDICTED: similar t ( 916) 563 120.2 2.2e-24 gi|190625213|gb|EDV40737.1| GF10657 [Drosophila an ( 883) 557 119.0 4.8e-24 gi|149034441|gb|EDL89178.1| rCG29391, isoform CRA_ ( 291) 546 116.4 9.4e-24 gi|193919286|gb|EDW18153.1| GI12251 [Drosophila mo ( 911) 552 118.0 9.6e-24 gi|194212455|ref|XP_001493491.2| PREDICTED: simila (1473) 551 118.0 1.6e-23 gi|193898553|gb|EDV97419.1| GH14705 [Drosophila gr ( 923) 546 116.9 2.2e-23 gi|194155346|gb|EDW70530.1| GJ11483 [Drosophila vi ( 906) 544 116.5 2.8e-23 gi|212513409|gb|EEB15986.1| zinc finger protein RN ( 932) 542 116.1 3.8e-23 gi|194119631|gb|EDW41674.1| GM24445 [Drosophila se ( 884) 540 115.7 4.8e-23 gi|194197067|gb|EDX10643.1| GD12514 [Drosophila si ( 884) 540 115.7 4.8e-23 gi|1620755|gb|AAB40721.1| zinc-finger protein Zn72 ( 558) 537 114.9 5.1e-23 gi|16197869|gb|AAL13586.1| GH12756p [Drosophila me ( 635) 537 115.0 5.6e-23 gi|28380510|gb|AAO41247.1| Zn72D, isoform B [Droso ( 884) 537 115.1 7.2e-23 gi|190654961|gb|EDV52204.1| GG13496 [Drosophila er ( 890) 537 115.1 7.2e-23 gi|194181353|gb|EDW94964.1| GE19795 [Drosophila ya (1057) 537 115.2 8.2e-23 gi|194165202|gb|EDW80103.1| GK23905 [Drosophila wi ( 948) 520 111.8 7.6e-22 gi|54642016|gb|EAL30765.1| GA18742 [Drosophila pse ( 915) 506 109.0 4.9e-21 gi|47225665|emb|CAG08008.1| unnamed protein produc (1082) 469 101.9 8.4e-19 gi|73986754|ref|XP_868125.1| PREDICTED: similar to ( 298) 438 95.3 2.2e-17 gi|33416425|gb|AAH55641.1| Zfr protein [Danio reri ( 481) 418 91.6 4.6e-16 gi|47215327|emb|CAG12561.1| unnamed protein produc (1327) 420 92.4 7.4e-16 gi|37590257|gb|AAH59198.1| Zinc finger RNA binding (1052) 418 91.9 8.2e-16 gi|123227937|emb|CAM15355.1| zinc finger RNA bindi (1074) 418 91.9 8.4e-16 gi|162416261|sp|Q6PCR6.2|ZFR_DANRE RecName: Full=Z (1074) 418 91.9 8.4e-16 gi|38649048|gb|AAH62986.1| ZFR protein [Homo sapie ( 606) 412 90.5 1.2e-15 gi|30705046|gb|AAH51893.1| ZFR protein [Homo sapie ( 631) 412 90.5 1.3e-15 gi|74182834|dbj|BAE34733.1| unnamed protein produc ( 530) 411 90.3 1.3e-15 >>gi|148699496|gb|EDL31443.1| mCG134265, isoform CRA_b [ (804 aa) initn: 2750 init1: 2530 opt: 2545 Z-score: 2688.7 bits: 507.6 E(): 4.7e-141 Smith-Waterman score: 2662; 88.437% identity (90.150% similar) in 467 aa overlap (10-446:330-792) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEATRGGPG :::::::::::::::::::::::::::::: gi|148 TSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPG 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA1 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA1 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA1 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA1 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA1 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP 600 610 620 630 640 650 340 350 360 370 380 mKIAA1 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--------------- ::::::::::::::::::::::::::::::::::::::::::.:. gi|148 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQARASGLQPCVIVIRVLRE 660 670 680 690 700 710 390 400 410 420 mKIAA1 --------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDG-PGLQDP ::::::::::::::::::::::::::::::::. . : :. : gi|148 LCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVATACPASCGLPA--D- 720 730 740 750 760 770 430 440 450 mKIAA1 CEKGPQDALEPMTPQQREDLTASAQ .::. . : : : gi|148 -TQGPSHGTVTSTDQIRGRGPGPEEDEGG 780 790 800 >>gi|148699498|gb|EDL31445.1| mCG134265, isoform CRA_d [ (815 aa) initn: 2750 init1: 2530 opt: 2545 Z-score: 2688.6 bits: 507.6 E(): 4.8e-141 Smith-Waterman score: 2662; 88.437% identity (90.150% similar) in 467 aa overlap (10-446:341-803) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEATRGGPG :::::::::::::::::::::::::::::: gi|148 TSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPG 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK 380 390 400 410 420 430 100 110 120 130 140 150 mKIAA1 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ 440 450 460 470 480 490 160 170 180 190 200 210 mKIAA1 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI 500 510 520 530 540 550 220 230 240 250 260 270 mKIAA1 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT 560 570 580 590 600 610 280 290 300 310 320 330 mKIAA1 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP 620 630 640 650 660 670 340 350 360 370 380 mKIAA1 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--------------- ::::::::::::::::::::::::::::::::::::::::::.:. gi|148 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQARASGLQPCVIVIRVLRE 680 690 700 710 720 730 390 400 410 420 mKIAA1 --------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDG-PGLQDP ::::::::::::::::::::::::::::::::. . : :. : gi|148 LCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVATACPASCGLPA--D- 740 750 760 770 780 430 440 450 mKIAA1 CEKGPQDALEPMTPQQREDLTASAQ .::. . : : : gi|148 -TQGPSHGTVTSTDQIRGRGPGPEEDEGG 790 800 810 >>gi|148699495|gb|EDL31442.1| mCG134265, isoform CRA_a [ (858 aa) initn: 2794 init1: 2530 opt: 2545 Z-score: 2688.3 bits: 507.6 E(): 4.9e-141 Smith-Waterman score: 2876; 92.405% identity (92.827% similar) in 474 aa overlap (10-454:330-798) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEATRGGPG :::::::::::::::::::::::::::::: gi|148 TSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPG 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA1 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA1 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA1 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA1 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA1 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP 600 610 620 630 640 650 340 350 360 370 380 mKIAA1 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--------------- ::::::::::::::::::::::::::::::::::::::::::.:. gi|148 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQARASGLQPCVIVIRVLRE 660 670 680 690 700 710 390 400 410 420 430 mKIAA1 --------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDGPGLQDPC :::::::::::::::::::::::::::::::: ::::::::: gi|148 LCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVAT-----DGPGLQDPC 720 730 740 750 760 770 440 450 mKIAA1 EKGPQDALEPMTPQQREDLTASAQ :::::::::::::::::::::::: gi|148 EKGPQDALEPMTPQQREDLTASAQRALRLVAFRQIHKVLHMEQLPPRTRFGAGARARKRM 780 790 800 810 820 830 >>gi|148699497|gb|EDL31444.1| mCG134265, isoform CRA_c [ (869 aa) initn: 2794 init1: 2530 opt: 2545 Z-score: 2688.2 bits: 507.6 E(): 5e-141 Smith-Waterman score: 2876; 92.405% identity (92.827% similar) in 474 aa overlap (10-454:341-809) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEATRGGPG :::::::::::::::::::::::::::::: gi|148 TSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPG 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK 380 390 400 410 420 430 100 110 120 130 140 150 mKIAA1 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ 440 450 460 470 480 490 160 170 180 190 200 210 mKIAA1 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI 500 510 520 530 540 550 220 230 240 250 260 270 mKIAA1 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT 560 570 580 590 600 610 280 290 300 310 320 330 mKIAA1 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP 620 630 640 650 660 670 340 350 360 370 380 mKIAA1 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--------------- ::::::::::::::::::::::::::::::::::::::::::.:. gi|148 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQARASGLQPCVIVIRVLRE 680 690 700 710 720 730 390 400 410 420 430 mKIAA1 --------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDGPGLQDPC :::::::::::::::::::::::::::::::: ::::::::: gi|148 LCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVAT-----DGPGLQDPC 740 750 760 770 780 440 450 mKIAA1 EKGPQDALEPMTPQQREDLTASAQ :::::::::::::::::::::::: gi|148 EKGPQDALEPMTPQQREDLTASAQRALRLVAFRQIHKVLHMEQLPPRTRFGAGARARKRM 790 800 810 820 830 840 >>gi|163954931|ref|NP_001030067.2| zinc finger RNA bindi (874 aa) initn: 2530 init1: 2530 opt: 2545 Z-score: 2688.2 bits: 507.6 E(): 5e-141 Smith-Waterman score: 2924; 93.460% identity (93.882% similar) in 474 aa overlap (10-454:341-814) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEATRGGPG :::::::::::::::::::::::::::::: gi|163 TSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPG 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA1 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 EASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRK 380 390 400 410 420 430 100 110 120 130 140 150 mKIAA1 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 KVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPEETPQ 440 450 460 470 480 490 160 170 180 190 200 210 mKIAA1 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 PQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIYPTEEELQAI 500 510 520 530 540 550 220 230 240 250 260 270 mKIAA1 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 QTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVLRGDHSVQLT 560 570 580 590 600 610 280 290 300 310 320 330 mKIAA1 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 LLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGVKVTVSATSP 620 630 640 650 660 670 340 350 360 370 380 mKIAA1 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--------------- ::::::::::::::::::::::::::::::::::::::::::.:. gi|163 LMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQARASGLQPCVIVIRVLRE 680 690 700 710 720 730 390 400 410 420 430 mKIAA1 --------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDGPGLQDPC :::::::::::::::::::::::::::::::::::::::::::::: gi|163 LCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLTDGPGLQDPC 740 750 760 770 780 790 440 450 mKIAA1 EKGPQDALEPMTPQQREDLTASAQ :::::::::::::::::::::::: gi|163 EKGPQDALEPMTPQQREDLTASAQRALRLVAFRQIHKVLHMEQLPPRTRFGAGARARKRM 800 810 820 830 840 850 >>gi|109480165|ref|XP_234923.4| PREDICTED: similar to zi (822 aa) initn: 1461 init1: 1461 opt: 2303 Z-score: 2432.9 bits: 460.3 E(): 8.3e-127 Smith-Waterman score: 2681; 85.093% identity (89.648% similar) in 483 aa overlap (1-454:290-766) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFK ::: :::::: :::::.:. :::::::: : gi|109 TSVKHEAHARHSSHTQGRPAPAKGPAASRKGCSRPWFLAGSPELQTVHSWPGDRRPSHCK 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA1 VEATRGGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTG .:::::: ::::: ::: ::::::::.:::.:::::::::::::::::::::::::::: gi|109 AEATRGGSGEASGISGDTEPVGTEYVEQVCSEEGKVIRFRCKLCECSFNDRNARDMHLTG 320 330 340 350 360 370 100 110 120 130 140 150 mKIAA1 RRHRLQYRKKVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEH ::::::::::::::::::.:::::.::::::::::. ::.:..:::..::.::: gi|109 RRHRLQYRKKVDPTLPVATRPSGPMQRVLAKRLQRQRQQTQARLEDAQRWNSEL------ 380 390 400 410 420 430 160 170 180 190 200 210 mKIAA1 SRQPEETPQPQVEEQLPGLPAWALPAPTTRPGMATARRQSGRRPESSDDRHVMCKHASIY :::::: ::::::::::: :.:::::::::::::. ::::::::::::::::: :::::: gi|109 SRQPEEPPQPQVEEQLPGSPTWALPAPTTRPGMASPRRQSGRRPESSDDRHVMYKHASIY 440 450 460 470 480 490 220 230 240 250 260 270 mKIAA1 PTEEELQAIQTAVSHTERALRLVSDTLAEESSQHGTLASPPPRMLKGVVRVGILAKGLVL :::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::::: gi|109 PTEEELQAIQTAVSHTERALRLVSDTLAEESSQQGTLVSPPPRMLKGVVRVGILAKGLVL 500 510 520 530 540 550 280 290 300 310 320 330 mKIAA1 RGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVEPGV 560 570 580 590 600 610 340 350 360 370 380 mKIAA1 KVTVSATSPLMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS------ ::::::::::::::::::: ::.::::::.::::::::::::::::::::.:. gi|109 KVTVSATSPLMREDPSVKQELQDSLSDPEDILDRERCLETLAALRHAKWFQARASGLQPC 620 630 640 650 660 670 390 400 410 420 mKIAA1 -----------------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLT ::::::::::::::::::::::::::::::::::::: gi|109 VIVIRVLRDLCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALLT 680 690 700 710 720 730 430 440 450 mKIAA1 DGPGLQDPCEKGPQDALEPMTPQQREDLTASAQ ::::::::::::::::::::::::::::::::: gi|109 DGPGLQDPCEKGPQDALEPMTPQQREDLTASAQHALRLVAFRQIHKVLHMEHLPPRTRFG 740 750 760 770 780 790 gi|109 ARKRMREASQTQEGARERKRGRQGTAGLP 800 810 820 >>gi|130492454|ref|NP_055989.1| zinc finger RNA binding (939 aa) initn: 1132 init1: 612 opt: 1426 Z-score: 1505.7 bits: 288.9 E(): 3.7e-75 Smith-Waterman score: 1691; 56.996% identity (75.514% similar) in 486 aa overlap (10-454:405-881) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEA----TR :::: :. :: .:.. :.:. :. gi|130 KPTSPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQ 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 GGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRL :: :: .. .: ::: :::::: ::::.:.::.:::::::::: ::.:.:. :::::: gi|130 GGSKEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRL 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA1 QYRKKVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPE ::::::.: ::.:..::. ..:: .:.... . .. .::. ::: .: :. : : gi|130 QYRKKVNPDLPIATEPSSRARKVLEERMRKQRHLAEERLEQLRRWHAERRRLE------E 500 510 520 530 540 160 170 180 190 200 210 mKIAA1 ETPQPQVEEQLPGLPAWALPAPTTRP-GMATARRQSGRRPESSDDRHVMCKHASIYPTEE : :: .: . : : :: : :: . :.: : :::: ::::::::::::.:::::. gi|130 EPPQ-DVPPHAP--PDWAQPLLMGRPESPASAPLQPGRRPASSDDRHVMCKHATIYPTEQ 550 560 570 580 590 600 220 230 240 250 260 mKIAA1 ELQAIQTAVSHTERALRLVSDTLAEESS----QHG---TLASPPPRMLKGVVRVGILAKG :: :.: ::::.::::.:::::::::. ..: . ..: :.::::.:::::::: gi|130 ELLAVQRAVSHAERALKLVSDTLAEEDRGRREEEGDKRSSVAPQTRVLKGVMRVGILAKG 610 620 630 640 650 660 270 280 290 300 310 320 mKIAA1 LVLRGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVE :.::::..:.:.::::.:::::::.:: :.:::.:..:.::.:::::: .::::::.: : gi|130 LLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQMVTEDEYEVSSDPEANIVISSCEE 670 680 690 700 710 720 330 340 350 360 370 380 mKIAA1 PGVKVTVSATSPLMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--- : ..::.:.::::::::::. : .. .: :::. ..:::.:::::::.:::.:. gi|130 PRMQVTISVTSPLMREDPSTDPGVEEPQADAGDVLSPKKCLESLAALRHARWFQARASGL 730 740 750 760 770 780 390 400 410 mKIAA1 --------------------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGA ::::::::..::: ::.::::.::::: ::::. gi|130 QPCVIVIRVLRDLCRRVPTWGALPAWAMELLVEKAVSSAAGPLGPGDAVRRVLECVATGT 790 800 810 820 830 840 420 430 440 450 mKIAA1 LLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQ :::::::::::::. ::::::: :.:::.::::: gi|130 LLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFRQTHKVLGMDLLPPRH 850 860 870 880 890 900 gi|130 RLGARFRKRQRGPGEGEEGAGEKKRGRRGGEGLV 910 920 930 >>gi|160395566|sp|Q9UPR6.2|ZFR2_HUMAN RecName: Full=Zinc (939 aa) initn: 1132 init1: 612 opt: 1426 Z-score: 1505.7 bits: 288.9 E(): 3.7e-75 Smith-Waterman score: 1691; 56.996% identity (75.514% similar) in 486 aa overlap (10-454:405-881) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEA----TR :::: :. :: .:.. :.:. :. gi|160 KPTSPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQ 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 GGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRL :: :: .. .: ::: :::::: ::::.:.::.:::::::::: ::.:.:. :::::: gi|160 GGSKEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRL 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA1 QYRKKVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPE ::::::.: ::.:..::. ..:: .:.... . .. .::. ::: .: :. : : gi|160 QYRKKVNPDLPIATEPSSRARKVLEERMRKQRHLAEERLEQLRRWHAERRRLE------E 500 510 520 530 540 160 170 180 190 200 210 mKIAA1 ETPQPQVEEQLPGLPAWALPAPTTRP-GMATARRQSGRRPESSDDRHVMCKHASIYPTEE : :: .: . : : :: : :: . :.: : :::: ::::::::::::.:::::. gi|160 EPPQ-DVPPHAP--PDWAQPLLMGRPESPASAPLQPGRRPASSDDRHVMCKHATIYPTEQ 550 560 570 580 590 600 220 230 240 250 260 mKIAA1 ELQAIQTAVSHTERALRLVSDTLAEESS----QHG---TLASPPPRMLKGVVRVGILAKG :: :.: ::::.::::.:::::::::. ..: . ..: :.::::.:::::::: gi|160 ELLAVQRAVSHAERALKLVSDTLAEEDRGRREEEGDKRSSVAPQTRVLKGVMRVGILAKG 610 620 630 640 650 660 270 280 290 300 310 320 mKIAA1 LVLRGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVE :.::::..:.:.::::.:::::::.:: :.:::.:..:.::.:::::: .::::::.: : gi|160 LLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQMVTEDEYEVSSDPEANIVISSCEE 670 680 690 700 710 720 330 340 350 360 370 380 mKIAA1 PGVKVTVSATSPLMREDPSVKQGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS--- : ..::.:.::::::::::. : .. .: :::. ..:::.:::::::.:::.:. gi|160 PRMQVTISVTSPLMREDPSTDPGVEEPQADAGDVLSPKKCLESLAALRHARWFQARASGL 730 740 750 760 770 780 390 400 410 mKIAA1 --------------------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGA ::::::::..::: ::.::::.::::: ::::. gi|160 QPCVIVIRVLRDLCRRVPTWGALPAWAMELLVEKAVSSAAGPLGPGDAVRRVLECVATGT 790 800 810 820 830 840 420 430 440 450 mKIAA1 LLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQ :::::::::::::. ::::::: :.:::.::::: gi|160 LLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFRQTHKVLGMDLLPPRH 850 860 870 880 890 900 gi|160 RLGARFRKRQRGPGEGEEGAGEKKRGRRGGEGLV 910 920 930 >>gi|119589688|gb|EAW69282.1| hCG23534, isoform CRA_a [H (926 aa) initn: 846 init1: 486 opt: 1394 Z-score: 1472.0 bits: 282.6 E(): 2.8e-73 Smith-Waterman score: 1682; 56.879% identity (75.565% similar) in 487 aa overlap (10-454:391-868) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEA----TR :::: :. :: .:.. :.:. :. gi|119 KPTSPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQ 370 380 390 400 410 420 40 50 60 70 80 90 mKIAA1 GGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRL :: :: .. .: ::: :::::: ::::.:.::.:::::::::: ::.:.:. :::::: gi|119 GGSKEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRL 430 440 450 460 470 480 100 110 120 130 140 150 mKIAA1 QYRKKVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPE ::::::.: ::.:..::. ..:: .:.... . .. .::. ::: .: :. : : gi|119 QYRKKVNPDLPIATEPSSRARKVLEERMRKQRHLAEERLEQLRRWHAERRRLE------E 490 500 510 520 530 160 170 180 190 200 210 mKIAA1 ETPQPQVEEQLPGLPAWALPAPTTRP-GMATARRQSGRRPESSDDRHVMCKHASIYPTEE : :: .: . : : :: : :: . :.: : :::: ::::::::::::.:::::. gi|119 EPPQ-DVPPHAP--PDWAQPLLMGRPESPASAPLQPGRRPASSDDRHVMCKHATIYPTEQ 540 550 560 570 580 590 220 230 240 250 260 mKIAA1 ELQAIQTAVSHTERALRLVSDTLAEESS----QHG---TLASPPPRMLKGVVRVGILAKG :: :.: ::::.::::.:::::::::. ..: . ..: :.::::.:::::::: gi|119 ELLAVQRAVSHAERALKLVSDTLAEEDRGRREEEGDKRSSVAPQTRVLKGVMRVGILAKG 600 610 620 630 640 650 270 280 290 300 310 320 mKIAA1 LVLRGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVE :.::::..:.:.::::.:::::::.:: :.:::.:..:.::.:::::: .::::::.: : gi|119 LLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQMVTEDEYEVSSDPEANIVISSCEE 660 670 680 690 700 710 330 340 350 360 370 380 mKIAA1 PGVKVTVSATSPLMREDPSVK-QGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS-- : ..::.:.::::::::::. .: .. .: :::. ..:::.:::::::.:::.:. gi|119 PRMQVTISVTSPLMREDPSTDPEGVEEPQADAGDVLSPKKCLESLAALRHARWFQARASG 720 730 740 750 760 770 390 400 410 mKIAA1 ---------------------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATG ::::::::..::: ::.::::.::::: :::: gi|119 LQPCVIVIRVLRDLCRRVPTWGALPAWAMELLVEKAVSSAAGPLGPGDAVRRVLECVATG 780 790 800 810 820 830 420 430 440 450 mKIAA1 ALLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQ .:::::::::::::. ::::::: :.:::.::::: gi|119 TLLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFRQTHKVLGMDLLPPR 840 850 860 870 880 890 gi|119 HRLGARFRKRQRGPGEGEEGAGEKKRGRRGGEGLV 900 910 920 >>gi|119589689|gb|EAW69283.1| hCG23534, isoform CRA_b [H (940 aa) initn: 846 init1: 486 opt: 1394 Z-score: 1471.9 bits: 282.6 E(): 2.8e-73 Smith-Waterman score: 1682; 56.879% identity (75.565% similar) in 487 aa overlap (10-454:405-882) 10 20 30 mKIAA1 GCSPPWFLAGPPELQTMHGRPGDRRPSHFKVEA----TR :::: :. :: .:.. :.:. :. gi|119 KPTSPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQ 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 GGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRL :: :: .. .: ::: :::::: ::::.:.::.:::::::::: ::.:.:. :::::: gi|119 GGSKEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRL 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA1 QYRKKVDPTLPVAARPSGPIQRVLAKRLQRHWQQVQTQLEDTRRWDSELRQQEEHSRQPE ::::::.: ::.:..::. ..:: .:.... . .. .::. ::: .: :. : : gi|119 QYRKKVNPDLPIATEPSSRARKVLEERMRKQRHLAEERLEQLRRWHAERRRLE------E 500 510 520 530 540 160 170 180 190 200 210 mKIAA1 ETPQPQVEEQLPGLPAWALPAPTTRP-GMATARRQSGRRPESSDDRHVMCKHASIYPTEE : :: .: . : : :: : :: . :.: : :::: ::::::::::::.:::::. gi|119 EPPQ-DVPPHAP--PDWAQPLLMGRPESPASAPLQPGRRPASSDDRHVMCKHATIYPTEQ 550 560 570 580 590 600 220 230 240 250 260 mKIAA1 ELQAIQTAVSHTERALRLVSDTLAEESS----QHG---TLASPPPRMLKGVVRVGILAKG :: :.: ::::.::::.:::::::::. ..: . ..: :.::::.:::::::: gi|119 ELLAVQRAVSHAERALKLVSDTLAEEDRGRREEEGDKRSSVAPQTRVLKGVMRVGILAKG 610 620 630 640 650 660 270 280 290 300 310 320 mKIAA1 LVLRGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIVISACVE :.::::..:.:.::::.:::::::.:: :.:::.:..:.::.:::::: .::::::.: : gi|119 LLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQMVTEDEYEVSSDPEANIVISSCEE 670 680 690 700 710 720 330 340 350 360 370 380 mKIAA1 PGVKVTVSATSPLMREDPSVK-QGQQDALSDPEDVLDRERCLETLAALRHAKWFQVRS-- : ..::.:.::::::::::. .: .. .: :::. ..:::.:::::::.:::.:. gi|119 PRMQVTISVTSPLMREDPSTDPEGVEEPQADAGDVLSPKKCLESLAALRHARWFQARASG 730 740 750 760 770 780 390 400 410 mKIAA1 ---------------------------AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATG ::::::::..::: ::.::::.::::: :::: gi|119 LQPCVIVIRVLRDLCRRVPTWGALPAWAMELLVEKAVSSAAGPLGPGDAVRRVLECVATG 790 800 810 820 830 840 420 430 440 450 mKIAA1 ALLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQ .:::::::::::::. ::::::: :.:::.::::: gi|119 TLLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFRQTHKVLGMDLLPPR 850 860 870 880 890 900 gi|119 HRLGARFRKRQRGPGEGEEGAGEKKRGRRGGEGLV 910 920 930 940 454 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:58:18 2009 done: Thu Mar 12 15:05:05 2009 Total Scan time: 919.090 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]