FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0942.ptfa, 276 aa vs ./tmplib.26680 library 1768741 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.3036+/-0.0039; mu= 10.3784+/- 0.259 mean_var=98.8932+/-23.324, 0's: 0 Z-trim: 7 B-trim: 20 in 1/35 Lambda= 0.1290 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA2011 ( 771 res) mfj31262 ( 771) 920 181 1.3e-46 mKIAA4219 ( 918 res) mbg04678 ( 918) 183 44 2.8e-05 mKIAA1424 ( 1262 res) mbg05674 (1262) 183 44 3.4e-05 mKIAA0302 ( 1972 res) mbg05848 (1972) 183 45 4.7e-05 mKIAA2016 ( 1731 res) mbg07142 (1731) 145 37 0.0058 mKIAA0403 ( 423 res) mbp11090 ( 423) 137 35 0.0062 >>mKIAA2011 ( 771 res) mfj31262 (771 aa) initn: 947 init1: 794 opt: 920 Z-score: 929.2 bits: 181.2 E(): 1.3e-46 Smith-Waterman score: 920; 59.471% identity (61.927% ungapped) in 227 aa overlap (1-223:444-665) 10 20 30 mKIAA0 KALYNSIKNEKLEWAVDDEEKKKSPSEGTD ::::.:::::::.::.:.:: ..: :: .: mKIAA2 HNIGKRMTCGDFIGNLEGLNDGGDFPRELLKALYSSIKNEKLQWAIDEEELRRSLSELAD 420 430 440 450 460 470 40 50 60 70 80 mKIAA0 EKANGTHPKTISRI----GSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKR .::.:.:. ::...::::. .:.::::: : :.::.::: : .::::::: mKIAA2 P-----NPKVIKRVSGGSGSSSSPFLDLTPEPGAAVYKHGALVRKVHADPDCRKTPRGKR 480 490 500 510 520 90 100 110 120 130 140 mKIAA0 GWKTFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALASKATDYEKKPNVFKLKT :::.:...::: .:::::.::.: :.::. .::::.:.:::::..:.:: :.:.:: :.: mKIAA2 GWKSFHGILKGMILYLQKEEYQPGKALSEAELKNAISIHHALATRASDYSKRPHVFYLRT 530 540 550 560 570 580 150 160 170 180 190 200 mKIAA0 ADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQK :::::.:::. : :.::.::..:: :::.:::::::::..:::::::::::...:.:::. mKIAA2 ADWRVFLFQAPSLEQMQSWITRINVVAAMFSAPPFPAAVSSQKKFSRPLLPSAATRLSQE 590 600 610 620 630 640 210 220 230 240 250 260 mKIAA0 TRYEIYVSVLKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPVTAKVKRNVSERKDHRP . . . . :: ..:: mKIAA2 EQVRTHEAKLKAMASELREHRAAHLGKKARGKEADEQRQKEAYLEFEKSRYGTYAALLRV 650 660 670 680 690 700 >>mKIAA4219 ( 918 res) mbg04678 (918 aa) initn: 95 init1: 95 opt: 183 Z-score: 187.2 bits: 44.2 E(): 2.8e-05 Smith-Waterman score: 186; 26.178% identity (29.412% ungapped) in 191 aa overlap (18-193:726-910) 10 20 30 40 mKIAA0 KALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTISRIGST ::..: : : .. :. :... : mKIAA4 HAATERTSPGEERGPWPQDLQPPPLPGHHKDEQEK---SVGDERPATEPLFKVLDTPLSE 700 710 720 730 740 750 50 60 70 80 90 100 mKIAA0 TNPFLDIP--HDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKD . .: .: . .: :.:.:: : :..: . ..:.:...: ::... : . :: mKIAA4 GDEPTTLPAQRDLGHTVQMEGYLGRK-H-DLEGPNKKASNRSWNNLYCVLRNSQLTFYKD 760 770 780 790 800 810 110 120 130 140 150 160 mKIAA0 EYKPEKSLSDEDLKNAVSVHHALASKATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGW . .. . .. ....::. :..:.:: .::::. .. ::. .. ::: : mKIAA4 AKNLALGVPYHG-EEPLALRHAICEIAVNYKKKKHVFKLRLSNGSEWLFHGKDEEEMLMW 820 830 840 850 860 170 180 190 200 210 mKIAA0 -------INKINCVAAVFSAPPFP------AAIGSQKKFSRPLLPATTTKLSQKTRYEIY ::. . . . .. :.: :..:...: .: mKIAA4 LQSMSTAINESQSIRVKAQSLPLPSLAGPDASVGKKEKEKRFSFFPKKK 870 880 890 900 910 220 230 240 250 260 270 mKIAA0 VSVLKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPVTAKVKRNVSERKDHRPETPGIK >>mKIAA1424 ( 1262 res) mbg05674 (1262 aa) initn: 211 init1: 90 opt: 183 Z-score: 185.5 bits: 44.3 E(): 3.4e-05 Smith-Waterman score: 183; 33.594% identity (37.069% ungapped) in 128 aa overlap (42-169:231-346) 20 30 40 50 60 70 mKIAA0 LEWAVDDEEKKKSPSEGTDEKANGTHPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLARK :: ::... : : :: . :.: . mKIAA1 REDAKLSFKHVSSLKGIKITDSQKSSEDSGSRKGSSSEVFSD------AA--REGWLQFR 210 220 230 240 250 80 90 100 110 120 130 mKIAA0 IHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALASK . ::.. . : :: .:.::.: ::: :: . :.. .:. .. .::. : . mKIAA1 PLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKD--RREQTTPSEE-EQPISVNACLIDI 260 270 280 290 300 140 150 160 170 180 190 mKIAA0 ATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKF . . :. :::.: :.: . : ::... ..: .::. :. mKIAA1 SYSETKRRNVFRLTTSDCECL-FQAEDRDDMLSWIKTIQESSNLNEEDTGVTNRDLISRR 310 320 330 340 350 360 200 210 220 230 240 250 mKIAA0 SRPLLPATTTKLSQKTRYEIYVSVLKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPVT mKIAA1 IKEYNSLLSKTEQLPKTPRQSLSIRQTLLGAKSEPKTQSPHSPKEESERKLLSKDDTSPP 370 380 390 400 410 420 >>mKIAA0302 ( 1972 res) mbg05848 (1972 aa) initn: 194 init1: 138 opt: 183 Z-score: 183.1 bits: 44.5 E(): 4.7e-05 Smith-Waterman score: 191; 29.697% identity (32.237% ungapped) in 165 aa overlap (66-230:1807-1958) 40 50 60 70 80 90 mKIAA0 THPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVL :.: :: . . .::. ..:.:.. : :: mKIAA0 PMPQSRSSEAAHGATLPTRGPELSAQEQMEGMLCRKQEMEAFNKKA--ANRSWQNVYCVL 1780 1790 1800 1810 1820 1830 100 110 120 130 140 150 mKIAA0 KGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALASKATDYEKKPNVFKLKTADWRVLLFQ . : . :: .. . . ::. .: .: : ::.:. .:::: : . ::: mKIAA0 RRGSLGFYKDARAASAGVPYHG-EVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQ 1840 1850 1860 1870 1880 1890 160 170 180 190 200 210 mKIAA0 TQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQKTRYEIYVSV ... ::..:. .: . :. :. : : ... :..:... :.. . :: mKIAA0 AKDEAEMSSWLRVVNAAIATASSAP-----GESEE---PVVPSASRGLTRAMTMPP-VS- 1900 1910 1920 1930 1940 220 230 240 250 260 270 mKIAA0 LKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPVTAKVKRNVSERKDHRPETPGIKQKV ::. : . :: : mKIAA0 QPEGSIVLRSKDGREREREKRFSFFKKNK 1950 1960 1970 >>mKIAA2016 ( 1731 res) mbg07142 (1731 aa) initn: 141 init1: 80 opt: 145 Z-score: 145.6 bits: 37.4 E(): 0.0058 Smith-Waterman score: 145; 22.360% identity (23.077% ungapped) in 161 aa overlap (62-218:521-680) 40 50 60 70 80 mKIAA0 KANGTHPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPR--GKRGWK : :.:.: : . .. .. . ..: :: mKIAA2 ETSTETMESSSESVSSLEQLDLLFEKEQGVVRKAGWLFFKPLVTLQKERKLELVARRKWK 500 510 520 530 540 550 90 100 110 120 130 140 mKIAA0 TFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALASKATDYEKKPNVFKLKTADW ....::: .: . . : ... .. . :. .. ...... .. :: .:: :... mKIAA2 QYWVTLKGCTLLFY-ETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCG 560 570 580 590 600 150 160 170 180 190 200 mKIAA0 RVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPA--AIGSQKKFSRPLLPATTTKLSQKT : :::. : ....:.. :. . : . : .. :. .: :: ..: mKIAA2 DVYLFQATSQTDLENWVTAIHSACASLFAKKHGKEDTVRLLKSQTRSLLQKIDMDSKMKK 610 620 630 640 650 660 210 220 230 240 250 260 mKIAA0 RYEIYVSVLKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPVTAKVKRNVSERKDHRPE :. .::... mKIAA2 MAELQLSVVSDPKNRKAIENQIRQWEQNLEKFHMDLFRMRCYLASLQGGELPNPKSLLAA 670 680 690 700 710 720 >>mKIAA0403 ( 423 res) mbp11090 (423 aa) initn: 134 init1: 80 opt: 137 Z-score: 145.1 bits: 35.3 E(): 0.0062 Smith-Waterman score: 137; 29.457% identity (36.190% ungapped) in 129 aa overlap (56-169:1-120) 30 40 50 60 70 mKIAA0 SEGTDEKANGTHPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLA---RKI------HADM :.: :. .::. :.: ::: mKIAA0 HSPVHATL-AGFFNMSRRRISCKDLGHADC 10 20 80 90 100 110 120 130 mKIAA0 DG---KKTPRG---KRGWKTFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALAS .: :: .: . :: :..::::. :: .... ::. . :.. . mKIAA0 QGWLYKKKEKGTFLSNKWKKFWVVLKGSSLYWYSNQMA-EKA------DGFVNLSDFTVE 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 KATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKK .:.. .:: :.::.. . ... : ... .::. :.::.. mKIAA0 RASECKKK-NAFKINHPQIKAFYFAAENLQEMNVWLNKLGFAVTHQESITKDEECYSESE 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 FSRPLLPATTTKLSQKTRYEIYVSVLKEGGKELLTTDGNEPVGLKKSHSSPSLNPDASPV mKIAA0 QEDPEVAVEAPPPPYASTTSSPVVRVDAAQWASSSSPKRRETSCSFSSLENTVKAPSQFS 150 160 170 180 190 200 276 residues in 1 query sequences 1768741 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:25 2006 done: Mon Mar 27 10:32:26 2006 Scan time: 0.490 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]