FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4169.ptfa, 281 aa vs ./tmplib.26680 library 1768736 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8025+/-0.00391; mu= 12.0775+/- 0.261 mean_var=81.2575+/-19.859, 0's: 0 Z-trim: 5 B-trim: 66 in 1/35 Lambda= 0.1423 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0991 ( 605 res) mph02064 ( 605) 1133 242 5.3e-65 mKIAA0158 ( 367 res) mpm05359 ( 367) 740 161 7.2e-41 mKIAA4020 ( 391 res) mfj24359 ( 391) 729 159 3.6e-40 mKIAA0202 ( 470 res) mbh00446 ( 470) 607 134 1.4e-32 mKIAA0128 ( 449 res) mfj19346 ( 449) 589 130 1.8e-31 >>mKIAA0991 ( 605 res) mph02064 (605 aa) initn: 965 init1: 965 opt: 1133 Z-score: 1259.4 bits: 242.0 E(): 5.3e-65 Smith-Waterman score: 1133; 74.449% identity (75.111% ungapped) in 227 aa overlap (37-262:325-550) 10 20 30 40 50 60 mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE ::::::::::.::::::..:::. . . :: mKIAA0 EFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEE 300 310 320 330 340 350 70 80 90 100 110 120 mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE .::::.:::.: : ::: ::.:::::::::::::.:::::::.:: :.::.::::.:.:: mKIAA0 RIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEE 360 370 380 390 400 410 130 140 150 160 170 180 mKIAA4 VNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEK ::: ::::::::::::::::: :::::::::.::::.:::::::.::::::::.::::. mKIAA0 VNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEER 420 430 440 450 460 470 190 200 210 220 230 240 mKIAA4 SEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRV ::::. .: :::. ::::::::: ::. :.:.: : .::::::::.::::::::. mKIAA0 VYFKQRITADLLSNGIDVYPQKEFDEDAEDRLVNEKFR-EMIPFAVVGSDHEYQVNGKRI 480 490 500 510 520 530 250 260 270 280 mKIAA4 LGRKTPWGIIE-GNPAHLPEGQAARRNRTDRRKEQL ::::: :: :: : .: mKIAA0 LGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSNIHFEAYRVKRLNEGNSAMA 540 550 560 570 580 590 >>mKIAA0158 ( 367 res) mpm05359 (367 aa) initn: 633 init1: 364 opt: 740 Z-score: 826.1 bits: 161.1 E(): 7.2e-41 Smith-Waterman score: 740; 49.782% identity (50.893% ungapped) in 229 aa overlap (37-262:50-276) 10 20 30 40 50 60 mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE :.::::::::.:.:: ... . . : mKIAA0 TPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAE 20 30 40 50 60 70 70 80 90 100 110 120 mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE :: .::.:.: ::: :::..:::.::::.:: :: ..:.. : .::.::.:..:..: mKIAA0 KIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDE 80 90 100 110 120 130 130 140 150 160 170 180 mKIAA4 VNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEK .. :.. : :.:::::.::::: ::.:.:::. ::: . . :::.::::::::.::.:. mKIAA0 SGLNRRH-IIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKER 140 150 160 170 180 190 190 200 210 220 230 240 mKIAA4 SEFKQRVRKELEVNGIEFY--PQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGK ..:.:. :.: ..:..: :. : ::: :: :. .. . :.::.::::.. ...:: mKIAA0 ERLKKRILDEIEEHSIKIYHLPDAESDED-EDFKEQTRLLKASIPFSVVGSNQLIEAKGK 200 210 220 230 240 250 250 260 270 280 mKIAA4 RVLGRKTPWGIIE-GNPAHLPEGQAARRNRTDRRKEQL .: :: :::..: :: : mKIAA0 KVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKV 260 270 280 290 300 310 >>mKIAA4020 ( 391 res) mfj24359 (391 aa) initn: 506 init1: 333 opt: 729 Z-score: 813.5 bits: 158.9 E(): 3.6e-40 Smith-Waterman score: 729; 48.416% identity (49.309% ungapped) in 221 aa overlap (37-257:47-263) 10 20 30 40 50 60 mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE :.::::::::.:.:: ... . . mKIAA4 LEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYP-GPSH 20 30 40 50 60 70 70 80 90 100 110 120 mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE .: :::... .:.::::.. ::..::::::: ..: :::.:. ::. ..: .:. : mKIAA4 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAE 80 90 100 110 120 130 130 140 150 160 170 180 mKIAA4 VNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEK . :.. .::.::.::::::.:.::.:.:::.::::.: . :::::.::::::.: :: mKIAA4 SRVNRRQ-MPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEEC 140 150 160 170 180 190 190 200 210 220 230 240 mKIAA4 SEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRV ..::... ::.. . :..: : :.. :.: . ::. . .:.:::::. .:::::: mKIAA4 QQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVK-KIK-DRLPLAVVGSNTIIEVNGKRV 200 210 220 230 240 250 250 260 270 280 mKIAA4 LGRKTPWGIIEGNPAHLPEGQAARRNRTDRRKEQL ::. :::. : mKIAA4 RGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGV 260 270 280 290 300 310 >>mKIAA0202 ( 470 res) mbh00446 (470 aa) initn: 562 init1: 271 opt: 607 Z-score: 677.2 bits: 133.9 E(): 1.4e-32 Smith-Waterman score: 607; 43.243% identity (45.070% ungapped) in 222 aa overlap (37-257:92-305) 10 20 30 40 50 60 mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE :..:.::.::.::::.. . .: ..: mKIAA0 WAAMLGLTASLTSWSVKSVTQGFSFNILCVGETGIGKATLMNTLFNTTFETEEASHHEE- 70 80 90 100 110 120 70 80 90 100 110 120 mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE :... . ..:..:..:::..:. :::::::... ..:: ::. :.:..:.:: mKIAA0 ----CVRLRPQTYDLQESNVHLKLTIVDAVGFGDQINKDDSYRPIVDYIDAQFENYLQEE 130 140 150 160 170 130 140 150 160 170 180 mKIAA4 VNIARKK-RIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEE ..: :. :::.: :::::.::::::. ::: ::.:.. :::::.::::::.. : mKIAA0 LKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSE 180 190 200 210 220 230 190 200 210 220 230 240 mKIAA4 KSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKR .:: .. :: ::...: .: : : .: . . . .::::::: .: .:..: mKIAA0 LHKFKIKIMGELVSNGVQIY---QFPTDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKL 240 250 260 270 280 290 250 260 270 280 mKIAA4 VLGRKTPWGIIEGNPAHLPEGQAARRNRTDRRKEQL : .:. :::... mKIAA0 VRARQYPWGVVQVENENHCDFVKLREMLIRVNMEDLREQTHSRHYELYRRCKLEEMGFQD 300 310 320 330 340 350 >>mKIAA0128 ( 449 res) mfj19346 (449 aa) initn: 525 init1: 236 opt: 589 Z-score: 657.5 bits: 130.2 E(): 1.8e-31 Smith-Waterman score: 589; 41.667% identity (43.578% ungapped) in 228 aa overlap (37-262:71-290) 10 20 30 40 50 60 mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE :..:::::::..:::... . .. .. mKIAA0 LAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQ-- 50 60 70 80 90 70 80 90 100 110 120 mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE : :.... . ..:..: .:::...: :::::::.:. ..:: ..:. :.: .:.:: mKIAA0 --PG-VQLQSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQEE 100 110 120 130 140 150 130 140 150 160 170 180 mKIAA4 VNIARK-KRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEE ..: : . :.:.: :::::.::::::. ::: ::.:.. :::::::::.:... : mKIAA0 LKIRRVLHSYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIAKSDAISKSE 160 170 180 190 200 210 190 200 210 220 230 240 mKIAA4 KSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKR ..:: .. .:: ::...: .: : :. .: . . .::::::: .: ....: mKIAA0 LAKFKIKITSELVSNGVQIY---QFPTDDESVSEINGTMNAHLPFAVVGSTEEVKIGNKM 220 230 240 250 260 270 250 260 270 280 mKIAA4 VLGRKTPWGIIE-GNPAHLPEGQAARRNRTDRRKEQL . .:. ::: .. : :: mKIAA0 MRARQYPWGTVQVENEAHCDFVKLREMLIRVNMEDLREQTHARHYELYRRCKLEEMGFKD 280 290 300 310 320 330 281 residues in 1 query sequences 1768736 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:03:58 2006 done: Mon Mar 27 11:03:59 2006 Scan time: 0.480 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]