# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg08890.fasta.nr -Q ../query/mKIAA0439.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0439, 442 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916179 sequences Expectation_n fit: rho(ln(x))= 5.6797+/-0.000194; mu= 9.7565+/- 0.011 mean_var=92.1298+/-17.636, 0's: 43 Z-trim: 69 B-trim: 0 in 0/65 Lambda= 0.133621 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148677748|gb|EDL09695.1| neural precursor cell ( 963) 2160 426.5 1.4e-116 gi|167466245|ref|NP_001107858.1| neural precursor ( 976) 2160 426.5 1.4e-116 gi|148677749|gb|EDL09696.1| neural precursor cell (1004) 2160 426.5 1.4e-116 gi|73921205|sp|Q8CFI0.2|NED4L_MOUSE RecName: Full= (1004) 2160 426.5 1.4e-116 gi|109507468|ref|XP_001064485.1| PREDICTED: simila ( 948) 2156 425.7 2.3e-116 gi|109506712|ref|XP_574161.2| PREDICTED: similar t ( 948) 2156 425.7 2.3e-116 gi|51895883|gb|AAH82281.1| Nedd4l protein [Mus mus ( 875) 2153 425.1 3.2e-116 gi|149064473|gb|EDM14676.1| neural precursor cell ( 963) 2146 423.8 8.8e-116 gi|194214706|ref|XP_001488587.2| PREDICTED: simila ( 969) 2084 411.9 3.5e-112 gi|222352090|ref|NP_001138441.1| neural precursor ( 947) 2082 411.5 4.5e-112 gi|15824269|dbj|BAB69424.1| NEDD4-like ubiquitin l ( 955) 2082 411.5 4.5e-112 gi|73921206|sp|Q5RBF2.1|NED4L_PONAB RecName: Full= ( 959) 2080 411.1 5.9e-112 gi|21619660|gb|AAH32597.1| NEDD4L protein [Homo sa ( 911) 2077 410.5 8.5e-112 gi|32250391|gb|AAM76730.1| ubiquitin ligase NEDD4h ( 947) 2076 410.3 1e-111 gi|119583468|gb|EAW63064.1| neural precursor cell ( 871) 2072 409.5 1.6e-111 gi|222352088|ref|NP_001138440.1| neural precursor ( 967) 2072 409.6 1.7e-111 gi|73921204|sp|Q96PU5.2|NED4L_HUMAN RecName: Full= ( 975) 2072 409.6 1.7e-111 gi|32351456|gb|AAP75706.1| NEDD4.2 [Homo sapiens] ( 975) 2067 408.6 3.4e-111 gi|32250389|gb|AAM76729.1| ubiquitin ligase NEDD4g ( 967) 2066 408.4 3.9e-111 gi|73945946|ref|XP_533393.2| PREDICTED: similar to (1027) 2065 408.2 4.6e-111 gi|126321734|ref|XP_001374089.1| PREDICTED: simila (1105) 2045 404.4 7.1e-110 gi|74200961|dbj|BAE37373.1| unnamed protein produc ( 896) 2002 396.0 1.9e-107 gi|6808077|emb|CAB70754.1| hypothetical protein [H ( 820) 2000 395.6 2.3e-107 gi|224091797|ref|XP_002186734.1| PREDICTED: neural (1053) 1967 389.3 2.3e-105 gi|118103503|ref|XP_424462.2| PREDICTED: similar t (1045) 1936 383.4 1.4e-103 gi|55469121|gb|AAL87621.2|AF412121_1 late domain-i ( 965) 1925 381.2 5.9e-103 gi|109122340|ref|XP_001088661.1| PREDICTED: ubiqui (1010) 1830 362.9 2e-97 gi|49522434|gb|AAH75469.1| Neural precursor cell e ( 970) 1780 353.3 1.5e-94 gi|49257568|gb|AAH74133.1| Nedd4 protein [Xenopus ( 971) 1780 353.3 1.5e-94 gi|2347056|emb|CAA03915.1| Nedd4 protein [Xenopus ( 971) 1780 353.3 1.5e-94 gi|17939587|gb|AAH19345.1|AAH19345 Unknown (protei ( 855) 1687 335.3 3.5e-89 gi|26335213|dbj|BAC31307.1| unnamed protein produc ( 835) 1627 323.7 1e-85 gi|148677751|gb|EDL09698.1| neural precursor cell ( 839) 1627 323.7 1e-85 gi|148677747|gb|EDL09694.1| neural precursor cell ( 855) 1617 321.8 4e-85 gi|24980941|gb|AAH39746.1| Neural precursor cell e ( 855) 1617 321.8 4e-85 gi|149064476|gb|EDM14679.1| neural precursor cell ( 835) 1613 321.0 6.7e-85 gi|12656270|gb|AAK00809.1|AF277232_1 ubiquitin-pro ( 855) 1612 320.8 7.8e-85 gi|149064474|gb|EDM14677.1| neural precursor cell ( 855) 1603 319.1 2.6e-84 gi|194034612|ref|XP_001926350.1| PREDICTED: simila ( 665) 1584 315.4 2.7e-83 gi|74483046|gb|ABA10330.1| NEDD4L variant [Homo sa ( 834) 1539 306.8 1.3e-80 gi|194678264|ref|XP_587080.4| PREDICTED: neural pr ( 854) 1539 306.8 1.3e-80 gi|119583478|gb|EAW63074.1| neural precursor cell ( 750) 1529 304.8 4.6e-80 gi|12003318|gb|AAG43524.1|AF210730_1 NEDD4La [Homo ( 854) 1529 304.8 5.1e-80 gi|221043218|dbj|BAH13286.1| unnamed protein produ ( 854) 1529 304.8 5.1e-80 gi|221040456|dbj|BAH11935.1| unnamed protein produ ( 835) 1519 302.9 1.9e-79 gi|189533707|ref|XP_688089.3| PREDICTED: neural pr ( 994) 1425 284.8 6.2e-74 gi|47219877|emb|CAF97147.1| unnamed protein produc ( 999) 1350 270.4 1.4e-69 gi|53851172|gb|AAU95503.1| NEDD4-2 minus WW2,3 var ( 256) 1225 245.8 9e-63 gi|156763547|gb|ABU94640.1| NEDD4L [Gallus gallus] ( 204) 1142 229.7 5e-58 gi|116487539|gb|AAI25812.1| Zgc:152720 [Danio reri ( 361) 1030 208.3 2.4e-51 >>gi|148677748|gb|EDL09695.1| neural precursor cell expr (963 aa) initn: 2159 init1: 2159 opt: 2160 Z-score: 2249.6 bits: 426.5 E(): 1.4e-116 Smith-Waterman score: 2160; 97.840% identity (98.765% similar) in 324 aa overlap (11-334:22-343) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTIKKTLN ...: : :::::::::::::::::::::::::::::: gi|148 MEQGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTKTIKKTLN 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 RRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQELSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQELSEE 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 VSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSAGFLFW ::::::::::::::::::::::::::::::::::::::::::::: gi|148 VSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTRRARSSTVTG 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 FGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCFVLFFL gi|148 GEESTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSAT 360 370 380 390 400 410 >>gi|167466245|ref|NP_001107858.1| neural precursor cell (976 aa) initn: 2159 init1: 2159 opt: 2160 Z-score: 2249.5 bits: 426.5 E(): 1.4e-116 Smith-Waterman score: 2160; 97.840% identity (98.765% similar) in 324 aa overlap (11-334:35-356) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQ ...: : ::::::::::::::::::::: gi|167 LGEPVYGLSEEEGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQ 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHF :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTR 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 QSSAGFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGV gi|167 RARSSTVTGGEESTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLA 370 380 390 400 410 420 >>gi|148677749|gb|EDL09696.1| neural precursor cell expr (1004 aa) initn: 2159 init1: 2159 opt: 2160 Z-score: 2249.3 bits: 426.5 E(): 1.4e-116 Smith-Waterman score: 2160; 97.840% identity (98.765% similar) in 324 aa overlap (11-334:63-384) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQ ...: : ::::::::::::::::::::: gi|148 HHSRGLEFSGGQGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQ 40 50 60 70 80 90 50 60 70 80 90 100 mKIAA0 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM 100 110 120 130 140 150 110 120 130 140 150 160 mKIAA0 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS 160 170 180 190 200 210 170 180 190 200 210 220 mKIAA0 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ 220 230 240 250 260 270 230 240 250 260 270 280 mKIAA0 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR 280 290 300 310 320 330 290 300 310 320 330 340 mKIAA0 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHF :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTR 340 350 360 370 380 390 350 360 370 380 390 400 mKIAA0 QSSAGFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGV gi|148 RARSSTVTGGEESTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLA 400 410 420 430 440 450 >>gi|73921205|sp|Q8CFI0.2|NED4L_MOUSE RecName: Full=E3 u (1004 aa) initn: 2159 init1: 2159 opt: 2160 Z-score: 2249.3 bits: 426.5 E(): 1.4e-116 Smith-Waterman score: 2160; 97.840% identity (98.765% similar) in 324 aa overlap (11-334:63-384) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQ ...: : ::::::::::::::::::::: gi|739 HHSRGLEFSGGQGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQ 40 50 60 70 80 90 50 60 70 80 90 100 mKIAA0 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTM 100 110 120 130 140 150 110 120 130 140 150 160 mKIAA0 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDS 160 170 180 190 200 210 170 180 190 200 210 220 mKIAA0 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQ 220 230 240 250 260 270 230 240 250 260 270 280 mKIAA0 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSR 280 290 300 310 320 330 290 300 310 320 330 340 mKIAA0 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHF :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TSPQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTR 340 350 360 370 380 390 350 360 370 380 390 400 mKIAA0 QSSAGFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGV gi|739 RARSSTVTGGEEPTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLA 400 410 420 430 440 450 >>gi|109507468|ref|XP_001064485.1| PREDICTED: similar to (948 aa) initn: 2240 init1: 2149 opt: 2156 Z-score: 2245.5 bits: 425.7 E(): 2.3e-116 Smith-Waterman score: 2156; 93.750% identity (97.619% similar) in 336 aa overlap (11-346:27-360) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTI ...: : ::::::::::::::::::::::::: gi|109 MSESPERRGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTKTI 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQH 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAH 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 RRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 RRFRSRRHISEDLEPEASEGGGEGPEPWETISEEVNMAGDSLSLALPPPPASPVSRTSPQ 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 ELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSA :::::.::::::::::::::::.::::::::::::::::::::::::::: . .. ... gi|109 ELSEELSRRLQITPDSNGEQFSALIQREPSSRLRSCSVTDTVAEQAHLPPPSVAYVHTTP 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 GFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCF :. gi|109 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSNNHLVEPQIRRPR 360 370 380 390 400 410 >>gi|109506712|ref|XP_574161.2| PREDICTED: similar to E3 (948 aa) initn: 2240 init1: 2149 opt: 2156 Z-score: 2245.5 bits: 425.7 E(): 2.3e-116 Smith-Waterman score: 2156; 93.750% identity (97.619% similar) in 336 aa overlap (11-346:27-360) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTI ...: : ::::::::::::::::::::::::: gi|109 MSESPERRGESRILRVKVVFGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTKTI 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQH 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAH 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 RRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 RRFRSRRHISEDLEPEASEGGGEGPEPWETISEEVNMAGDSLSLALPPPPASPVSRTSPQ 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 ELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSA :::::.::::::::::::::::.::::::::::::::::::::::::::: . .. ... gi|109 ELSEELSRRLQITPDSNGEQFSALIQREPSSRLRSCSVTDTVAEQAHLPPPSVAYVHTTP 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 GFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCF :. gi|109 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSNNHLVEPQIRRPR 360 370 380 390 400 410 >>gi|51895883|gb|AAH82281.1| Nedd4l protein [Mus musculu (875 aa) initn: 2153 init1: 2153 opt: 2153 Z-score: 2242.8 bits: 425.1 E(): 3.2e-116 Smith-Waterman score: 2153; 100.000% identity (100.000% similar) in 315 aa overlap (20-334:45-359) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTIKKTLN :::::::::::::::::::::::::::::: gi|518 CPRVAQVDFYQHQSNSTHALFVLILEDNHSDPYVKLSLYVADENRELALVQTKTIKKTLN 20 30 40 50 60 70 50 60 70 80 90 100 mKIAA0 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF 80 90 100 110 120 130 110 120 130 140 150 160 mKIAA0 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP 140 150 160 170 180 190 170 180 190 200 210 220 mKIAA0 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS 200 210 220 230 240 250 230 240 250 260 270 280 mKIAA0 RRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQELSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 RRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQELSEE 260 270 280 290 300 310 290 300 310 320 330 340 mKIAA0 VSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSAGFLFW ::::::::::::::::::::::::::::::::::::::::::::: gi|518 VSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPGAKDSPIRRAVKDTL 320 330 340 350 360 370 350 360 370 380 390 400 mKIAA0 FGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCFVLFFL gi|518 SNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPV 380 390 400 410 420 430 >>gi|149064473|gb|EDM14676.1| neural precursor cell expr (963 aa) initn: 2145 init1: 2145 opt: 2146 Z-score: 2235.0 bits: 423.8 E(): 8.8e-116 Smith-Waterman score: 2146; 96.914% identity (98.765% similar) in 324 aa overlap (11-334:22-343) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTIKKTLN ...: : :::::::::::::::::::::::::::::: gi|149 MEQGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTKTIKKTLN 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDF 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELP 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRS 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 RRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQELSEE :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|149 RRHISEDLEPEASEGGGEGPEPWETISEEVNMAGDSLSLALPPPPASPVSRTSPQELSEE 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 VSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSAGFLFW .::::::::::::::::.::::::::::::::::::::::::::: gi|149 LSRRLQITPDSNGEQFSALIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTRRARSSTVTG 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 FGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCFVLFFL gi|149 GEESTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSAT 360 370 380 390 400 410 >>gi|194214706|ref|XP_001488587.2| PREDICTED: similar to (969 aa) initn: 1573 init1: 1548 opt: 2084 Z-score: 2170.3 bits: 411.9 E(): 3.5e-112 Smith-Waterman score: 2084; 93.827% identity (98.148% similar) in 324 aa overlap (11-334:29-349) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTK ...: : ::::::::::::::::::::::: gi|194 MGYLAKATELEESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTK 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 TIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMER 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 PYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSAS 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 QHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEA :::::::::::::::::::::::::::::::::.::::::::::::::::.::::::::: gi|194 QHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRTTQWHRPSLMDVSSESDSNIRQINQEA 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 AHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTS :::::::::::::::::: .::: .:::::::::::.:..::::::.::::::::::::: gi|194 AHRRFRSRRHISEDLEPEPTEGG-DGPEPWETISEEVNITGDSLSLSLPPPPASPVSRTS 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 PQELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQS :::::::.:::::::::::::::.::::::::::::::::::.::::::::: gi|194 PQELSEELSRRLQITPDSNGEQFGSLIQREPSSRLRSCSVTDAVAEQAHLPPPSAPARRA 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 SAGFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFF gi|194 RSSTVSGGEEPTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAED 360 370 380 390 400 410 >>gi|222352090|ref|NP_001138441.1| neural precursor cell (947 aa) initn: 2121 init1: 1553 opt: 2082 Z-score: 2168.4 bits: 411.5 E(): 4.5e-112 Smith-Waterman score: 2082; 90.774% identity (96.429% similar) in 336 aa overlap (11-346:27-359) 10 20 30 40 mKIAA0 TSLPLPRSLLEEVFLPGICDPYVKLSLYVADENRELALVQTKTI ...: : ::::::::::::::::::::::::: gi|222 MRRLAFEQGESRILRVKVVSGIDLAKKDIF--GASDPYVKLSLYVADENRELALVQTKTI 10 20 30 40 50 50 60 70 80 90 100 mKIAA0 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 KKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPY 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQH ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|222 TFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSDQRDDMEHGWEVVDSNDSASQH 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAH :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|222 QEELPPPPLPPGWEEKVDNLGRTYYVNHNNRTTQWHRPSLMDVSSESDNNIRQINQEAAH 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 RRFRSRRHISEDLEPEASEGGGEGPEPWETISEEMNMAGDSLSLALPPPPASPVSRTSPQ :::::::::::::::: :::: . ::::::::::.:.:::::.:::::::::: :::::: gi|222 RRFRSRRHISEDLEPEPSEGG-DVPEPWETISEEVNIAGDSLGLALPPPPASPGSRTSPQ 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 ELSEEVSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDTVAEQAHLPPVTNTHFQSSA :::::.::::::::::::::::::::::::::::::::::.::::.:::: . .. ... gi|222 ELSEELSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDAVAEQGHLPPPSVAYVHTTP 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 GFLFWFGLVWFGSVWVFLFLVFGLVLFCFVGFCFLVFLFCFVFCFGGLVWGFFLGVFFCF :. gi|222 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSNNHLIEPQIRRPR 360 370 380 390 400 410 442 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 17:11:35 2009 done: Sat Mar 14 17:18:19 2009 Total Scan time: 911.120 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]