# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg08825.fasta.nr -Q ../query/mFLJ00134.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00134, 174 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7895006 sequences Expectation_n fit: rho(ln(x))= 5.1994+/-0.000197; mu= 8.3040+/- 0.011 mean_var=97.4476+/-18.298, 0's: 44 Z-trim: 176 B-trim: 0 in 0/68 Lambda= 0.129924 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|60360282|dbj|BAD90385.1| mFLJ00134 protein [Mus ( 174) 1318 256.2 1.8e-66 gi|74199638|dbj|BAE41490.1| unnamed protein produc ( 331) 1318 256.5 2.8e-66 gi|109457932|ref|XP_214805.4| PREDICTED: similar t ( 333) 1318 256.5 2.8e-66 gi|26354715|dbj|BAC40984.1| unnamed protein produc ( 331) 1289 251.0 1.2e-64 gi|119592834|gb|EAW72428.1| zinc finger protein 44 ( 296) 1181 230.8 1.4e-58 gi|18204650|gb|AAH21282.1| Zinc finger protein 444 ( 326) 1181 230.8 1.5e-58 gi|7023616|dbj|BAA92028.1| unnamed protein product ( 326) 1181 230.8 1.5e-58 gi|38258800|sp|Q8N0Y2.1|ZN444_HUMAN RecName: Full= ( 327) 1181 230.8 1.5e-58 gi|18676474|dbj|BAB84889.1| FLJ00134 protein [Homo ( 341) 1181 230.8 1.5e-58 gi|62898377|dbj|BAD97128.1| zinc finger protein 44 ( 327) 1164 227.6 1.4e-57 gi|149027623|gb|EDL83174.1| zinc finger protein 44 ( 310) 1149 224.8 9.3e-57 gi|157279347|gb|AAI53299.1| ZNF444 protein [Bos ta ( 322) 1144 223.9 1.8e-56 gi|148699362|gb|EDL31309.1| zinc finger protein 44 ( 321) 1139 222.9 3.5e-56 gi|27370770|gb|AAH37180.1| Zfp444 protein [Mus mus ( 305) 1132 221.6 8.3e-56 gi|73947395|ref|XP_853936.1| PREDICTED: similar to ( 478) 1093 214.5 1.8e-53 gi|18490526|gb|AAH22736.1| Zfp444 protein [Mus mus ( 140) 1063 208.3 3.9e-52 gi|114679245|ref|XP_001138679.1| PREDICTED: simila ( 304) 851 168.9 6e-40 gi|114679243|ref|XP_001138766.1| PREDICTED: zinc f ( 335) 851 169.0 6.4e-40 gi|224154013|ref|XP_002200256.1| PREDICTED: simila ( 747) 437 91.7 2.5e-16 gi|149051937|gb|EDM03754.1| zinc finger protein 20 ( 470) 424 89.1 9.9e-16 gi|149051936|gb|EDM03753.1| zinc finger protein 20 ( 778) 424 89.3 1.4e-15 gi|73947275|ref|XP_541342.2| PREDICTED: similar to (1249) 408 86.5 1.5e-14 gi|118109516|ref|XP_001235895.1| PREDICTED: hypoth ( 294) 395 83.4 3.1e-14 gi|118109192|ref|XP_427475.2| PREDICTED: hypotheti ( 565) 397 84.1 3.8e-14 gi|149414756|ref|XP_001516613.1| PREDICTED: simila ( 912) 391 83.2 1.1e-13 gi|126329696|ref|XP_001370818.1| PREDICTED: hypoth ( 619) 385 81.9 1.9e-13 gi|109458492|ref|XP_001067115.1| PREDICTED: simila ( 374) 379 80.5 2.9e-13 gi|126334256|ref|XP_001375720.1| PREDICTED: hypoth ( 454) 377 80.2 4.4e-13 gi|126333712|ref|XP_001370333.1| PREDICTED: hypoth ( 294) 373 79.3 5.5e-13 gi|194216146|ref|XP_001494213.2| PREDICTED: simila ( 875) 376 80.4 7.7e-13 gi|149575060|ref|XP_001517003.1| PREDICTED: simila (1064) 362 77.8 5.4e-12 gi|126322948|ref|XP_001369091.1| PREDICTED: simila ( 576) 358 76.8 6e-12 gi|133778768|gb|AAI34189.1| Si:dkey-4c15.14 protei ( 336) 352 75.4 9.2e-12 gi|119605286|gb|EAW84880.1| hCG2041264 [Homo sapie ( 251) 350 74.9 9.7e-12 gi|224106401|ref|XP_002196822.1| PREDICTED: hypoth ( 247) 344 73.8 2.1e-11 gi|74004268|ref|XP_545438.2| PREDICTED: similar to ( 242) 343 73.6 2.4e-11 gi|73947787|ref|XP_541658.2| PREDICTED: similar to ( 436) 346 74.4 2.4e-11 gi|149275189|ref|XP_001480606.1| PREDICTED: hypoth ( 167) 340 72.8 2.7e-11 gi|141716|sp|P18743.1|ZO2_XENLA RecName: Full=Oocy ( 157) 339 72.6 3e-11 gi|169730349|gb|ACA64750.1| B-locus zinc finger pr ( 639) 342 73.8 5.2e-11 gi|189534684|ref|XP_001919656.1| PREDICTED: simila ( 301) 336 72.4 6.8e-11 gi|210122778|gb|EEA70483.1| hypothetical protein B ( 798) 341 73.8 6.9e-11 gi|210119514|gb|EEA67239.1| hypothetical protein B ( 493) 336 72.6 9.5e-11 gi|74761386|sp|Q9H0M5.1|ZN700_HUMAN RecName: Full= ( 742) 338 73.2 9.6e-11 gi|224150570|ref|XP_002192860.1| PREDICTED: simila ( 238) 332 71.5 9.7e-11 gi|156224267|gb|EDO45094.1| predicted protein [Nem ( 220) 330 71.1 1.2e-10 gi|156208109|gb|EDO29728.1| predicted protein [Nem ( 179) 328 70.6 1.4e-10 gi|159155145|gb|AAI54844.1| Zgc:175284 protein [Da ( 425) 332 71.8 1.4e-10 gi|220672690|emb|CAX13731.1| novel protein (zgc:17 ( 425) 329 71.2 2.1e-10 gi|210100351|gb|EEA48432.1| hypothetical protein B ( 159) 323 69.6 2.4e-10 >>gi|60360282|dbj|BAD90385.1| mFLJ00134 protein [Mus mus (174 aa) initn: 1318 init1: 1318 opt: 1318 Z-score: 1349.6 bits: 256.2 E(): 1.8e-66 Smith-Waterman score: 1318; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:1-174) 10 20 30 40 50 60 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVSCPECGKSPLKPAHLLRHRQSHSGEKPHACP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVSCPECGKSPLKPAHLLRHRQSHSGEKPHACP 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 ECGKAFRRKEHLRRHRGTHPGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 ECGKAFRRKEHLRRHRGTHPGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTHS 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 GARPFACWECGKGFGRREHVLRHQRIHGRAAAVAQGTSAPGPEGGGAFPPWALG :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 GARPFACWECGKGFGRREHVLRHQRIHGRAAAVAQGTSAPGPEGGGAFPPWALG 130 140 150 160 170 >>gi|74199638|dbj|BAE41490.1| unnamed protein product [M (331 aa) initn: 1318 init1: 1318 opt: 1318 Z-score: 1346.2 bits: 256.5 E(): 2.8e-66 Smith-Waterman score: 1318; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:158-331) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::::::::::::::::::::::::: gi|741 VSVGKEESGAIPLGTSSGTEVPATENSGAMRPYKQEPGSPPPAPLAPVLPAFLAAPGTVS 130 140 150 160 170 180 40 50 60 70 80 90 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL 190 200 210 220 230 240 100 110 120 130 140 150 mFLJ00 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA 250 260 270 280 290 300 160 170 mFLJ00 AAVAQGTSAPGPEGGGAFPPWALG :::::::::::::::::::::::: gi|741 AAVAQGTSAPGPEGGGAFPPWALG 310 320 330 >>gi|109457932|ref|XP_214805.4| PREDICTED: similar to zi (333 aa) initn: 1318 init1: 1318 opt: 1318 Z-score: 1346.1 bits: 256.5 E(): 2.8e-66 Smith-Waterman score: 1318; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:160-333) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::::::::::::::::::::::::: gi|109 VGKEESGVIPLGTGASSETEVPSTGNSAAMRPYKQEPGSPPPAPLAPVLPAFLAAPGTVS 130 140 150 160 170 180 40 50 60 70 80 90 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL 190 200 210 220 230 240 100 110 120 130 140 150 mFLJ00 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA 250 260 270 280 290 300 160 170 mFLJ00 AAVAQGTSAPGPEGGGAFPPWALG :::::::::::::::::::::::: gi|109 AAVAQGTSAPGPEGGGAFPPWALG 310 320 330 >>gi|26354715|dbj|BAC40984.1| unnamed protein product [M (331 aa) initn: 1289 init1: 1289 opt: 1289 Z-score: 1316.8 bits: 251.0 E(): 1.2e-64 Smith-Waterman score: 1289; 98.851% identity (98.851% similar) in 174 aa overlap (1-174:158-331) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::::::::::::::::::::::::: gi|263 VSVGKEESGAIPLGTSSGTEVPATENSGAMRPYKQEPGSPPPAPLAPVLPAFLAAPGTVS 130 140 150 160 170 180 40 50 60 70 80 90 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPGPALRPL 190 200 210 220 230 240 100 110 120 130 140 150 mFLJ00 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIHGRA 250 260 270 280 290 300 160 170 mFLJ00 AAVAQGTSAPGPEGGGAFPPWALG ::::::::::::: :::::: ::: gi|263 AAVAQGTSAPGPEVGGAFPPLALG 310 320 330 >>gi|119592834|gb|EAW72428.1| zinc finger protein 444, i (296 aa) initn: 766 init1: 766 opt: 1181 Z-score: 1208.0 bits: 230.8 E(): 1.4e-58 Smith-Waterman score: 1181; 89.831% identity (92.655% similar) in 177 aa overlap (1-174:123-296) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|119 TGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 100 110 120 130 140 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. :::::::::::::::::::::::::::::::::::::: ::::::: ::: gi|119 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL 150 160 170 180 190 200 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 210 220 230 240 250 260 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|119 GRAAASAQGAVAPGPDGGGPFPPWPLG 270 280 290 >>gi|18204650|gb|AAH21282.1| Zinc finger protein 444 [Ho (326 aa) initn: 766 init1: 766 opt: 1181 Z-score: 1207.5 bits: 230.8 E(): 1.5e-58 Smith-Waterman score: 1181; 89.831% identity (92.655% similar) in 177 aa overlap (1-174:153-326) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|182 ATGGKEDSGMIPLGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 130 140 150 160 170 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. :::::::::::::::::::::::::::::::::::::: ::::::: ::: gi|182 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL 180 190 200 210 220 230 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 240 250 260 270 280 290 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|182 GRAAASAQGAVAPGPDGGGPFPPWPLG 300 310 320 >>gi|7023616|dbj|BAA92028.1| unnamed protein product [Ho (326 aa) initn: 766 init1: 766 opt: 1181 Z-score: 1207.5 bits: 230.8 E(): 1.5e-58 Smith-Waterman score: 1181; 89.831% identity (92.655% similar) in 177 aa overlap (1-174:153-326) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|702 ATGGKEDSGMIPLGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 130 140 150 160 170 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. :::::::::::::::::::::::::::::::::::::: ::::::: ::: gi|702 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL 180 190 200 210 220 230 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 240 250 260 270 280 290 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|702 GRAAASAQGAVAPGPDGGGPFPPWPLG 300 310 320 >>gi|38258800|sp|Q8N0Y2.1|ZN444_HUMAN RecName: Full=Zinc (327 aa) initn: 766 init1: 766 opt: 1181 Z-score: 1207.5 bits: 230.8 E(): 1.5e-58 Smith-Waterman score: 1181; 89.831% identity (92.655% similar) in 177 aa overlap (1-174:154-327) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|382 TGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 130 140 150 160 170 180 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. :::::::::::::::::::::::::::::::::::::: ::::::: ::: gi|382 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL 190 200 210 220 230 240 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|382 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 250 260 270 280 290 300 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|382 GRAAASAQGAVAPGPDGGGPFPPWPLG 310 320 >>gi|18676474|dbj|BAB84889.1| FLJ00134 protein [Homo sap (341 aa) initn: 766 init1: 766 opt: 1181 Z-score: 1207.2 bits: 230.8 E(): 1.5e-58 Smith-Waterman score: 1181; 89.831% identity (92.655% similar) in 177 aa overlap (1-174:168-341) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|186 TGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 140 150 160 170 180 190 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. :::::::::::::::::::::::::::::::::::::: ::::::: ::: gi|186 CPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDTHPGSPGSPGPAL 200 210 220 230 240 250 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 260 270 280 290 300 310 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|186 GRAAASAQGAVAPGPDGGGPFPPWPLG 320 330 340 >>gi|62898377|dbj|BAD97128.1| zinc finger protein 444 va (327 aa) initn: 749 init1: 749 opt: 1164 Z-score: 1190.2 bits: 227.6 E(): 1.4e-57 Smith-Waterman score: 1164; 89.266% identity (92.090% similar) in 177 aa overlap (1-174:154-327) 10 20 30 mFLJ00 RPYKQEPGSPPPAPLAPVLPAFLAAPGTVS :::::::.::: ::: ::::::::::.: gi|628 TGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQEPSSPP---LAPGLPAFLAAPGTTS 130 140 150 160 170 180 40 50 60 70 80 mFLJ00 CPECGKSPLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRGTHPGSPG---PAL ::::::. ::::::::::::::::::::::: :::::::::::::: ::::::: ::: gi|628 CPECGKTSLKPAHLLRHRQSHSGEKPHACPERGKAFRRKEHLRRHRDTHPGSPGSPGPAL 190 200 210 220 230 240 90 100 110 120 130 140 mFLJ00 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RPLPAREKPHACCECGKTFYWREHLVRHRKTHSGARPFACWECGKGFGRREHVLRHQRIH 250 260 270 280 290 300 150 160 170 mFLJ00 GRAAAVAQGTSAPGPEGGGAFPPWALG ::::: :::. ::::.::: :::: :: gi|628 GRAAASAQGAVAPGPDGGGPFPPWPLG 310 320 174 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 18:47:17 2009 done: Thu Mar 12 18:51:39 2009 Total Scan time: 627.000 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]