FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1916.ptfa, 588 aa vs ./tmplib.26680 library 1768429 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.9493+/-0.00466; mu= 14.5140+/- 0.313 mean_var=106.2066+/-24.459, 0's: 0 Z-trim: 22 B-trim: 0 in 0/36 Lambda= 0.1245 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0813 ( 1557 res) mbg05377 (1557) 287 63 2.1e-10 mKIAA1580 ( 640 res) mbf00310 ( 640) 277 61 4.2e-10 mKIAA0405 ( 637 res) mbg12039 ( 637) 271 60 8.9e-10 mKIAA1469 ( 663 res) mbj00677 ( 663) 269 59 1.2e-09 mKIAA4141 ( 1593 res) mbg03129 (1593) 249 56 2.4e-08 mKIAA0230 ( 1431 res) mbg10262 (1431) 248 56 2.6e-08 mKIAA4208 ( 721 res) mbe00555 ( 721) 232 53 1.2e-07 mKIAA1163 ( 638 res) mfj27154 ( 638) 227 52 2.1e-07 mKIAA0918 ( 839 res) mfj08110 ( 839) 220 51 6e-07 mKIAA0416 ( 528 res) mbg05717 ( 528) 214 49 9.6e-07 mKIAA1910 ( 760 res) mbg21737 ( 760) 193 46 1.6e-05 mKIAA1531 ( 1214 res) mpg00841 (1214) 192 46 2.5e-05 mKIAA1246 ( 833 res) mbj01002 ( 833) 189 45 2.8e-05 mKIAA0644 ( 837 res) mbg06261 ( 837) 187 45 3.7e-05 mKIAA4111 ( 619 res) mid39041 ( 619) 171 42 0.00022 mKIAA3016 ( 714 res) mph00541 ( 714) 164 41 0.00058 mKIAA1437 ( 811 res) mfj00342 ( 811) 160 40 0.001 mKIAA0606 ( 1318 res) mbg00108 (1318) 155 39 0.0026 mKIAA1497 ( 721 res) mid15001 ( 721) 142 37 0.009 >>mKIAA0813 ( 1557 res) mbg05377 (1557 aa) initn: 444 init1: 259 opt: 287 Z-score: 279.1 bits: 63.0 E(): 2.1e-10 Smith-Waterman score: 342; 29.508% identity (30.000% ungapped) in 183 aa overlap (78-258:759-940) 50 60 70 80 90 100 mKIAA1 ALWRGGGALGLLLLSAACLIPPSAQVRRLARCPATCSCTKESIICVGSSW--VPRIVPGD .:: :.: . : .. .:. .: . mKIAA0 FLRQIPLQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKN 730 740 750 760 770 780 110 120 130 140 150 160 mKIAA1 ISSLSLVNGTFLEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIE .. : : .. : . .. : . :::. :..:... . ...:... .: :.. : .. mKIAA0 VTELYLDGNQFTLVPGQL-STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 790 800 810 820 830 840 170 180 190 200 210 220 mKIAA1 TISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWL : ::.:::.: ::: .: ...: . .:.:. :: .: . .: . :::. .:: :. mKIAA0 CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWV 850 860 870 880 890 900 230 240 250 260 270 280 mKIAA1 KMTNSTVSDVLCIGPPEYQEKKLNEVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDV : . . . : ::::.. : : . . .:: mKIAA0 KTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCQNQGTCH 910 920 930 940 950 960 290 300 310 320 330 340 mKIAA1 YVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGSHI mKIAA0 NDPLEVYRCTCPSGYKGRHCEVSLDGCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGPT 970 980 990 1000 1010 1020 >>mKIAA1580 ( 640 res) mbf00310 (640 aa) initn: 483 init1: 226 opt: 277 Z-score: 273.7 bits: 60.7 E(): 4.2e-10 Smith-Waterman score: 277; 30.128% identity (30.921% ungapped) in 156 aa overlap (105-258:198-351) 80 90 100 110 120 130 mKIAA1 RLARCPATCSCTKESIICVGSSWVPRIVPGDISSLSLVNGTFLEIKDRMFSHLPSLQLLL .. :.:. .. :: . .. : .:. : mKIAA1 FNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELD 170 180 190 200 210 220 140 150 160 170 180 190 mKIAA1 LNSNSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRD :..: ...:: .: ::.::. :.. ..:..: :::: .:..:....::.:.. ::.: mKIAA1 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 230 240 250 260 270 280 200 210 220 230 240 250 mKIAA1 VFSDLDSLIELDLRGNKFECDCKAKWLYLWLK--MTNSTVSDVLCIGPPEYQEKKLNEVT .:. : : .. :. : ..:.: :: :.. ..:. . : ::. . . ..:. mKIAA1 LFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELD 290 300 310 320 330 340 260 270 280 290 300 310 mKIAA1 SFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSY . . : mKIAA1 QNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAV 350 360 370 380 390 400 >>mKIAA0405 ( 637 res) mbg12039 (637 aa) initn: 304 init1: 209 opt: 271 Z-score: 267.9 bits: 59.7 E(): 8.9e-10 Smith-Waterman score: 271; 30.612% identity (32.609% ungapped) in 196 aa overlap (105-293:179-369) 80 90 100 110 120 mKIAA1 RLARCPATCSCTKESIICVGSSWVPRIVPGDISSLS--LVNGTFLE---IKDRMFSHLPS ...:: .:.:..: : . :::: . mKIAA0 SSVPVGLPVDLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTK 150 160 170 180 190 200 130 140 150 160 170 180 mKIAA1 LQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIK :. . . ::.. : . : :: :... :.:. : .:: .:: : .:...::... mKIAA0 LKEFSIVRNSLSHPPPD-LPGT-HLIRLYLQDNQINHIPLTAFANLRKLERLDISNNQLR 210 220 230 240 250 260 190 200 210 220 230 240 mKIAA1 ALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLKMTNST--VSDVLCIGPPEYQEKK : . ::. :..: .: :.: . :::. ::. :::. :. : .: :: . . mKIAA0 MLTQGVFDHLSNLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMA 270 280 290 300 310 320 250 260 270 280 290 300 mKIAA1 LNEVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEM . :.. : :: . : :. : .: . ... .:: mKIAA0 VRELNMNLLSCPTTTPGLPVFTPAPSTVSPTTQSPT---LSVPSPSRGSVPPAPTPSKLP 330 340 350 360 370 380 310 320 330 340 350 360 mKIAA1 NFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGSHIYKYDESWTKFVKFQDIEVSRIS mKIAA0 TIPDWDGRERVTPPISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIV 390 400 410 420 430 440 >>mKIAA1469 ( 663 res) mbj00677 (663 aa) initn: 327 init1: 195 opt: 269 Z-score: 265.7 bits: 59.3 E(): 1.2e-09 Smith-Waterman score: 269; 29.560% identity (30.921% ungapped) in 159 aa overlap (111-264:219-375) 90 100 110 120 130 mKIAA1 ATCSCTKESIICVGSSWVPRIVPGDISSLSLVNGTFLE---IKDRMFSHLPSLQLLLLNS ...:..:. . :..: .: .: : : mKIAA1 RTIEELRLDDNRISTISSPSLHGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVR 190 200 210 220 230 240 140 150 160 170 180 190 mKIAA1 NSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVFS ::.:. . . : :. :... :.:. . ::: ::.: .:...::... ::. .:. mKIAA1 NSLTAAPVN-LPGT-SLRKLYLQDNHINRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFD 250 260 270 280 290 300 200 210 220 230 240 250 mKIAA1 DLDSLIELDLRGNKFECDCKAKWLYLWLKM--TNSTVSDVLCIGPPEYQEKKLNEVTSFD :::.. .: ::.: . : :: ::. ::. .. .: ..: .: . . ...... mKIAA1 DLDNITQLILRNNPWYCGCKMKWVRDWLQSLPVKVNVRGLMCQAPEKVRGMAIKDLSAEL 310 320 330 340 350 360 260 270 280 290 300 310 mKIAA1 YECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSYDNI ..: . .: mKIAA1 FDCKDSGIVSTIQITTAIPNTAYPAQGQWPAPVTKQPDIKNPKLIKDQRTTGSPSRKTIL 370 380 390 400 410 420 >>mKIAA4141 ( 1593 res) mbg03129 (1593 aa) initn: 725 init1: 235 opt: 249 Z-score: 242.1 bits: 56.2 E(): 2.4e-08 Smith-Waterman score: 346; 29.730% identity (30.220% ungapped) in 185 aa overlap (76-258:788-971) 50 60 70 80 90 100 mKIAA1 GMALWRGGGALGLLLLSAACLIPPSAQVRRLARCPATCSCTKESIICV--GSSWVPRIVP :.:::. :.: . : : . .:. .: mKIAA4 PYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIP 760 770 780 790 800 810 110 120 130 140 150 160 mKIAA1 GDISSLSLVNGTFLEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNK :.. : : .:. . . . .:. : :. :..: .... ...:... .: :.. :. mKIAA4 KDVTELYL-DGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 820 830 840 850 860 870 170 180 190 200 210 220 mKIAA1 IETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYL .. : .: ::..: ::: .: :...:. .:.::..: .: . .: . :::. .:: mKIAA4 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 880 890 900 910 920 930 230 240 250 260 270 280 mKIAA1 WLKMTNSTVSDVLCIGPPEYQEKKLNEVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKN :.: . . . : :: :. .: : . : . : mKIAA4 WVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPMDITIQAKCNPCLSNPCKNDGT 940 950 960 970 980 990 290 300 310 320 330 340 mKIAA1 DVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGS mKIAA4 CNNDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKHGGTCHLKEGENAGFWCTCADGFEG 1000 1010 1020 1030 1040 1050 >>mKIAA0230 ( 1431 res) mbg10262 (1431 aa) initn: 229 init1: 229 opt: 248 Z-score: 241.7 bits: 56.0 E(): 2.6e-08 Smith-Waterman score: 248; 32.051% identity (32.680% ungapped) in 156 aa overlap (106-258:41-196) 80 90 100 110 120 130 mKIAA1 LARCPATCSCTKESIICVGSSWVPRIVPGDISSLSLVNGTFLEIKDRMFSHLPSLQLLLL ...: : :. . .: . : : .:. : : mKIAA0 SSLPRTQQHLDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYL 20 30 40 50 60 70 140 150 160 170 180 190 mKIAA1 NSNSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDV .: . : .:: :: :: :... :.:::.. ..:. : : .: : ::.: : . mKIAA0 YKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLIPGT 80 90 100 110 120 130 200 210 220 230 240 250 mKIAA1 FSDLDSLIELDLRGNKFECDCKAKWLYLWLK---MTNSTVSDVLCIGPPEYQEKKLNEVT ::.:.:. .: : .: ..:::. :: :: ..... . . : : . : ... .: mKIAA0 FSQLESMKRLRLDSNALHCDCEILWLADLLKTYAQSGNAQAAATCEYPRRIQGRSVATIT 140 150 160 170 180 190 260 270 280 290 300 310 mKIAA1 SFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSY . .: mKIAA0 PEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLL 200 210 220 230 240 250 >>mKIAA4208 ( 721 res) mbe00555 (721 aa) initn: 557 init1: 201 opt: 232 Z-score: 229.4 bits: 52.7 E(): 1.2e-07 Smith-Waterman score: 232; 28.877% identity (31.395% ungapped) in 187 aa overlap (79-255:22-203) 50 60 70 80 90 100 mKIAA1 LWRGGGALGLLLLSAACLIPPSAQVRRLARCPATCSCTKES----IICV--GSSWVPRIV :: : : : .:. : .:: . mKIAA4 STMEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNI 10 20 30 40 50 110 120 130 140 150 160 mKIAA1 PGDISSLSLVNGTFLEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGN : :... .:: . :... :: : :. :... : ::: : .:. : ...: mKIAA4 DRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSN 60 70 80 90 100 110 170 180 190 200 210 mKIAA1 KIETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFEC---DCKAK .. :. . : :: .: :: : ::.. . .:.:. .: :::: :..: : : mKIAA4 RLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEK 120 130 140 150 160 170 220 230 240 250 260 270 mKIAA1 WLYLW-LKMTNSTVSDVLCIGPPEYQEKKLNEVTSFDYECTTTDFVVHQTLPYQSVSVDT . : :.. .. .... :. ..:...: .: mKIAA4 MVSLHTLSLDHNMIDNI-----PKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLAT 180 190 200 210 220 280 290 300 310 320 330 mKIAA1 FNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQ mKIAA4 SGIISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLC 230 240 250 260 270 280 >>mKIAA1163 ( 638 res) mfj27154 (638 aa) initn: 444 init1: 142 opt: 227 Z-score: 225.2 bits: 51.8 E(): 2.1e-07 Smith-Waterman score: 227; 31.250% identity (32.051% ungapped) in 160 aa overlap (56-211:156-315) 30 40 50 60 70 80 mKIAA1 ARRGAAAAAGVRARAGTRGPGMALWRGGGALGLLLLSAACLIPPSAQV-RRLARCPATCS : :::::. :. :.. : .. :::.: mKIAA1 RTCRGDSLPDPVAFLALPSDTMQPQRDLRGLWLLLLSVFLLLFEVARAGRSVVSCPANCL 130 140 150 160 170 180 90 100 110 120 130 140 mKIAA1 CTKESIICVGSSW--VPRIVPGDISSLSLVNGTFLEIKDRMF-SHLPSLQLLLLNSNSFT :... . : .. ::. .:. . :.: .... ... . ..: .:. :::. : .. mKIAA1 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 190 200 210 220 230 240 150 160 170 180 190 200 mKIAA1 VIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDS : ..::. . .:.:: . .:...:... : :. : : : :::: .. :..: :. . mKIAA1 FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQ 250 260 270 280 290 300 210 220 230 240 250 260 mKIAA1 LIELDLRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPPEYQEKKLNEVTSFDYECTTT : .: : :.. mKIAA1 LQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLH 310 320 330 340 350 360 >>mKIAA0918 ( 839 res) mfj08110 (839 aa) initn: 751 init1: 169 opt: 220 Z-score: 217.1 bits: 50.7 E(): 6e-07 Smith-Waterman score: 257; 29.670% identity (31.395% ungapped) in 182 aa overlap (104-278:336-514) 80 90 100 110 120 130 mKIAA1 RRLARCPATCSCTKESIICVGSSWVPRIVPGDISSLS--LVNGTFLE-IKDRMFSHLPSL ::...: .::. .: .. ..: : :: mKIAA0 VRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSL 310 320 330 340 350 360 140 150 160 170 180 190 mKIAA1 QLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKA : :.:. : . :. .: . .:. ::...:..... ..: :: : .:.: .: . . mKIAA0 QYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLT-LLRLNLRGNSFTS 370 380 390 400 410 420 200 210 220 230 240 mKIAA1 LP-RDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLKM--TNSTVSDVLCIGPPEYQEKK :: :...: :::..::. : ..: : . . ::... .. :..:.: .: .. : mKIAA0 LPVSGVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLKVGVLVDEVICKAPKKFAETY 430 440 450 460 470 480 250 260 270 280 290 300 mKIAA1 LNEVTSFDYECTT-TDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIE . . : . : .: :: : .:..: . mKIAA0 MRSIKS-ELLCPDYSDVVVSTPTP-SSIQVPSRTNAATPAVRLNSTGTPAGLGAGTGASS 490 500 510 520 530 540 310 320 330 340 350 360 mKIAA1 MNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGSHIYKYDESWTKFVKFQDIEVSRI mKIAA0 VPLSVLILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTSTNNSDVSSFNMQYSVYGGG 550 560 570 580 590 600 >>mKIAA0416 ( 528 res) mbg05717 (528 aa) initn: 561 init1: 174 opt: 214 Z-score: 213.5 bits: 49.3 E(): 9.6e-07 Smith-Waterman score: 214; 30.147% identity (30.597% ungapped) in 136 aa overlap (79-212:47-182) 50 60 70 80 90 100 mKIAA1 LWRGGGALGLLLLSAACLIPPSAQVRRLARCPATCSCTKESIIC--VGSSWVPRIVPGDI :: : : : . : : :: . mKIAA0 HFKWPLGAPMLAAIYAMSVVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGS 20 30 40 50 60 70 110 120 130 140 150 160 mKIAA1 SSLSLVNGTFLEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIET .::: .. . .. .:. . .: : :. :.......::: ::..:. :.. .::: mKIAA0 LGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 80 90 100 110 120 130 170 180 190 200 210 220 mKIAA1 ISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLK . ..: : .: .:.:. :....: ..: : .: : ::.:... mKIAA0 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 140 150 160 170 180 190 230 240 250 260 270 280 mKIAA1 MTNSTVSDVLCIGPPEYQEKKLNEVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVY mKIAA0 EFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISN 200 210 220 230 240 250 588 residues in 1 query sequences 1768429 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:55:51 2006 done: Mon Mar 27 10:55:52 2006 Scan time: 0.770 Display time: 0.170 Function used was FASTA [version 3.4t11 Apr 17, 2002]