# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg08496.fasta.nr -Q ../query/mKIAA0038.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0038, 237 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7913931 sequences Expectation_n fit: rho(ln(x))= 5.4335+/-0.00019; mu= 8.1833+/- 0.011 mean_var=81.8301+/-15.849, 0's: 33 Z-trim: 67 B-trim: 987 in 1/66 Lambda= 0.141781 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|4972951|gb|AAD34860.1|AF139987_3 Wbscr1 alterna ( 228) 1568 329.6 2.6e-88 gi|8469175|gb|AAF75557.1| wbscr1 [Homo sapiens] ( 228) 1559 327.7 9.4e-88 gi|90078680|dbj|BAE89020.1| unnamed protein produc ( 228) 1558 327.5 1.1e-87 gi|114613991|ref|XP_527788.2| PREDICTED: similar t ( 228) 1552 326.3 2.5e-87 gi|122143773|sp|Q1JPH6.1|IF4H_BOVIN RecName: Full= ( 228) 1547 325.3 5.2e-87 gi|75070803|sp|Q5RBR8.1|IF4H_PONAB RecName: Full=E ( 228) 1544 324.7 7.9e-87 gi|146231686|gb|ABQ12918.1| similar to eukaryotic ( 227) 1540 323.8 1.4e-86 gi|126314440|ref|XP_001366998.1| PREDICTED: simila ( 230) 1512 318.1 7.4e-85 gi|119614301|gb|EAW93895.1| hCG1745675 [Homo sapie ( 228) 1506 316.9 1.7e-84 gi|154426058|gb|AAI51553.1| WBSCR1 protein [Bos ta ( 222) 1483 312.2 4.4e-83 gi|224076102|ref|XP_002191428.1| PREDICTED: eukary ( 233) 1308 276.4 2.7e-72 gi|77748495|gb|AAI06566.1| MGC68480 protein [Xenop ( 232) 1219 258.2 8.2e-67 gi|15214055|sp|Q9WUK2.3|IF4H_MOUSE RecName: Full=E ( 248) 950 203.2 3.2e-50 gi|74204920|dbj|BAE20955.1| unnamed protein produc ( 248) 950 203.2 3.2e-50 gi|18276665|sp|Q15056.5|IF4H_HUMAN RecName: Full=E ( 248) 946 202.4 5.6e-50 gi|109066325|ref|XP_001082007.1| PREDICTED: simila ( 248) 945 202.2 6.4e-50 gi|81910358|sp|Q5XI72.1|IF4H_RAT RecName: Full=Euk ( 248) 944 202.0 7.4e-50 gi|126314438|ref|XP_001366953.1| PREDICTED: simila ( 250) 943 201.8 8.6e-50 gi|41472304|gb|AAS07439.1| unknown [Homo sapiens] ( 156) 937 200.4 1.4e-49 gi|114613989|ref|XP_001148962.1| PREDICTED: simila ( 248) 939 200.9 1.5e-49 gi|194387308|dbj|BAG60018.1| unnamed protein produ ( 141) 933 199.5 2.3e-49 gi|41472305|gb|AAS07440.1| unknown [Homo sapiens] ( 136) 925 197.9 6.9e-49 gi|53126777|emb|CAG30983.1| hypothetical protein [ ( 146) 868 186.2 2.4e-45 gi|50604028|gb|AAH78074.1| Wbscr1-prov protein [Xe ( 250) 863 185.4 7.3e-45 gi|38051913|gb|AAH60394.1| MGC68480 protein [Xenop ( 250) 840 180.7 1.9e-43 gi|89271950|emb|CAJ82417.1| Williams-Beuren syndro ( 252) 835 179.7 3.9e-43 gi|224076096|ref|XP_002191529.1| PREDICTED: eukary ( 255) 834 179.5 4.5e-43 gi|224076100|ref|XP_002191461.1| PREDICTED: eukary ( 263) 824 177.4 1.9e-42 gi|73957738|ref|XP_849626.1| PREDICTED: similar to ( 233) 821 176.8 2.6e-42 gi|210087211|gb|EEA35596.1| hypothetical protein B ( 197) 811 174.7 9.6e-42 gi|149756079|ref|XP_001493867.1| PREDICTED: simila ( 230) 811 174.7 1.1e-41 gi|41388912|gb|AAH65640.1| Zgc:77282 [Danio rerio] ( 263) 801 172.7 5e-41 gi|149614007|ref|XP_001521833.1| PREDICTED: hypoth ( 356) 800 172.6 7.2e-41 gi|209151312|gb|ACI33070.1| Eukaryotic translation ( 255) 770 166.4 3.9e-39 gi|223647362|gb|ACN10439.1| Eukaryotic translation ( 255) 768 166.0 5.2e-39 gi|41471479|gb|AAS07403.1| unknown [Homo sapiens] ( 91) 626 136.6 1.3e-30 gi|159164250|pdb|2DNG|A Chain A, Solution Structur ( 103) 612 133.8 1e-29 gi|210110550|gb|EEA58380.1| hypothetical protein B ( 325) 579 127.4 2.7e-27 gi|221123418|ref|XP_002155675.1| PREDICTED: simila ( 277) 550 121.4 1.5e-25 gi|47216527|emb|CAG02178.1| unnamed protein produc ( 238) 539 119.1 6.2e-25 gi|190589293|gb|EDV29315.1| hypothetical protein T ( 240) 534 118.1 1.3e-24 gi|198420592|ref|XP_002119962.1| PREDICTED: simila ( 337) 507 112.7 7.6e-23 gi|48103761|ref|XP_392894.1| PREDICTED: similar to ( 274) 494 110.0 4.1e-22 gi|72158865|ref|XP_788335.1| PREDICTED: similar to ( 307) 493 109.8 5.1e-22 gi|91085203|ref|XP_972024.1| PREDICTED: similar to ( 283) 486 108.3 1.3e-21 gi|108880407|gb|EAT44632.1| splicing factor, putat ( 313) 482 107.5 2.5e-21 gi|108880406|gb|EAT44631.1| splicing factor, putat ( 314) 477 106.5 5.1e-21 gi|156553096|ref|XP_001599359.1| PREDICTED: simila ( 290) 472 105.5 9.7e-21 gi|167865788|gb|EDS29171.1| splicing factor [Culex ( 330) 465 104.1 2.9e-20 gi|108880405|gb|EAT44630.1| splicing factor, putat ( 334) 461 103.3 5.1e-20 >>gi|4972951|gb|AAD34860.1|AF139987_3 Wbscr1 alternative (228 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1741.7 bits: 329.6 E(): 2.6e-88 Smith-Waterman score: 1568; 100.000% identity (100.000% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|497 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|497 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|497 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|497 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE 180 190 200 210 220 >>gi|8469175|gb|AAF75557.1| wbscr1 [Homo sapiens] gi (228 aa) initn: 1559 init1: 1559 opt: 1559 Z-score: 1731.8 bits: 327.7 E(): 9.4e-88 Smith-Waterman score: 1559; 99.123% identity (100.000% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|846 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|846 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::::::: gi|846 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|846 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE 180 190 200 210 220 >>gi|90078680|dbj|BAE89020.1| unnamed protein product [M (228 aa) initn: 1558 init1: 1558 opt: 1558 Z-score: 1730.7 bits: 327.5 E(): 1.1e-87 Smith-Waterman score: 1558; 98.684% identity (100.000% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|900 NTVQGDIDAIFKDLSIRSIRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::::::: gi|900 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE 180 190 200 210 220 >>gi|114613991|ref|XP_527788.2| PREDICTED: similar to Wb (228 aa) initn: 1552 init1: 1552 opt: 1552 Z-score: 1724.0 bits: 326.3 E(): 2.5e-87 Smith-Waterman score: 1552; 98.684% identity (99.561% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|114 NTVQGDIDAIFKDLSIRSVRLVRDKDTDXFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::::::: gi|114 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE 180 190 200 210 220 >>gi|122143773|sp|Q1JPH6.1|IF4H_BOVIN RecName: Full=Euka (228 aa) initn: 1547 init1: 1547 opt: 1547 Z-score: 1718.5 bits: 325.3 E(): 5.2e-87 Smith-Waterman score: 1547; 98.246% identity (99.561% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::::::: gi|122 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE : ::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|122 GPNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVHKEQE 180 190 200 210 220 >>gi|75070803|sp|Q5RBR8.1|IF4H_PONAB RecName: Full=Eukar (228 aa) initn: 1544 init1: 1544 opt: 1544 Z-score: 1715.2 bits: 324.7 E(): 7.9e-87 Smith-Waterman score: 1544; 98.246% identity (99.561% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|750 MADFDTYDDRAYNSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.:: :::::::::::: gi|750 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPAMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE 180 190 200 210 220 >>gi|146231686|gb|ABQ12918.1| similar to eukaryotic tran (227 aa) initn: 1540 init1: 1540 opt: 1540 Z-score: 1710.8 bits: 323.8 E(): 1.4e-86 Smith-Waterman score: 1540; 98.238% identity (99.559% similar) in 227 aa overlap (11-237:1-227) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 ADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::::::: gi|146 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE : ::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|146 GPNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVHKEQE 180 190 200 210 220 >>gi|126314440|ref|XP_001366998.1| PREDICTED: similar to (230 aa) initn: 1001 init1: 1001 opt: 1512 Z-score: 1679.7 bits: 318.1 E(): 7.4e-85 Smith-Waterman score: 1512; 96.087% identity (99.130% similar) in 230 aa overlap (10-237:1-230) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::.:::::::::.:::::::::::::::::::::::::::::::::: gi|126 NTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGG-SRPGDRRAG-PPMGSRFRDGPP ::::::::::::::::::::::::::..::::::::: :::::::.: :::::::::::: gi|126 RVDIAEGRKQDKGGFGFRKGGPDDRGFKDDFLGGRGGGSRPGDRRTGGPPMGSRFRDGPP 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 LRGSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|126 LRGSSMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVHKEQE 180 190 200 210 220 230 >>gi|119614301|gb|EAW93895.1| hCG1745675 [Homo sapiens] (228 aa) initn: 1557 init1: 1506 opt: 1506 Z-score: 1673.2 bits: 316.9 E(): 1.7e-84 Smith-Waterman score: 1506; 96.053% identity (98.684% similar) in 228 aa overlap (10-237:1-228) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF :::::::::.::::::.:::::::::::::::::::::::::::::::::: gi|119 MADFDTYDDQAYSSFGSGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NTVRGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR ::::::::::::::::::::::::::.:::::::::::::::::.:::::::: ::::: gi|119 RVDIAEGRKQDKGGFGFRKGGPDDRGFRDDFLGGRGGSRPGDRRTGPPMGSRFGDGPPLG 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE ::::::::::::: ::::::::::::::::::::::::::::::::::::::::::. gi|119 GSNMDFREPTEEESAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQK 180 190 200 210 220 >>gi|154426058|gb|AAI51553.1| WBSCR1 protein [Bos taurus (222 aa) initn: 941 init1: 918 opt: 1483 Z-score: 1647.9 bits: 312.2 E(): 4.4e-83 Smith-Waterman score: 1483; 96.053% identity (96.930% similar) in 228 aa overlap (10-237:1-222) 10 20 30 40 50 60 mKIAA0 WFLKERRRQMADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPF 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 NTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 RVDIAEGRKQDKGGFGFRKGGPDDRGYRDDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLR :::::::::::::::::::::::: ::::::::::::::.::::::::::::::: gi|154 RVDIAEGRKQDKGGFGFRKGGPDD------FLGGRGGSRPGDRRTGPPMGSRFRDGPPLR 120 130 140 150 160 190 200 210 220 230 mKIAA0 GSNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVQKEQE : ::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|154 GPNMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGARPREEVVHKEQE 170 180 190 200 210 220 237 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:34:22 2009 done: Thu Mar 12 14:39:33 2009 Total Scan time: 730.540 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]