FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0316.ptfa, 1239 aa vs ./tmplib.26680 library 1767778 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.2609+/-0.00578; mu= 7.5427+/- 0.385 mean_var=170.5187+/-40.142, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0982 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0967 ( 1443 res) mbh02135 (1443) 203 42 0.001 >>mKIAA0967 ( 1443 res) mbh02135 (1443 aa) initn: 339 init1: 202 opt: 203 Z-score: 159.2 bits: 41.8 E(): 0.001 Smith-Waterman score: 251; 20.687% identity (23.829% ungapped) in 1107 aa overlap (208-1234:398-1438) 180 190 200 210 220 230 mKIAA0 DLTPDTDSIQFVANSVYANIGDVKNFEAPEGIEEPLLHDICYAENTDD-AEDEDEVSCEE : ..: : . :. .. : ...: : : mKIAA0 ESSSAKDLACLIAGYYRLFVDPANSVFLWSGNRRPT-HRVSAEEGYESRACSDSEESSEV 370 380 390 400 410 420 240 250 260 270 280 290 mKIAA0 DLVVGEMNQPAILDLSGSSDDIIDLTTLPPPEGDDNEDDFLLRSLNMAIAAPPPGFRDSS : :. ... .. :: .. : ::. . :. . :. .. ::. mKIAA0 DCVLEPLSDRCLVKLSLCRP----FAREEQPPGDSPTPEATRRGPSTCGAS---SMTDSA 430 440 450 460 470 300 310 320 330 340 350 mKIAA0 DEEDTQSQATSFHEDKEQGSSLQNEEIPVSLIDAVPTSAEGKCEKGLDPAVVSTLEALEA . : ..: : . . .::: . . . . .:: .:. . . : :. . ::. mKIAA0 ESEASDSANTESRGCRTSGSSESMDALEEDDLDACSSSGTSFFHFG-PPGFSKGLET--N 480 490 500 510 520 530 360 370 380 390 400 410 mKIAA0 LSEEQQKSENSGVAIL----RAYSPESSSDSGNETNSSEM-TEGSELAAAQKQSESLSRM .::... :.:: : . .:. .. .: . .:: . : ::. .. . :. mKIAA0 SQEENSRVETSGFLCLLDLGQNANPQCQKIDGPQGLASEACSWGPELSMGRLDP----RL 540 550 560 570 580 590 420 430 440 450 460 mKIAA0 FLATHEGYHPLAEEQTEFPTSKAPSVGLPPKSSHGLAARPATDLPPKV-------VPSKQ . ... :. : .: .:. : ..:.. :.: .. ::. . : . mKIAA0 YEGSRTDYYNLC-------SSISPGSHLSDSGSESTASRQGAA-PPQWCQQGWMEAQSGS 600 610 620 630 640 470 480 490 500 510 mKIAA0 ILHSDHME-MEPETMETKSVTD-YFS---KLH-----MGSVAYSCTSKRKSKLPEGEGKS .:.: . . : ..: : . :.. :: : : . .. : .. . .:. mKIAA0 MLESLGLPALPPLAFEGGSSDEEYYDAADKLTPPDTLSGPRAADPSAMRLQSQSRTRGSE 650 660 670 680 690 700 520 530 540 550 560 mKIAA0 PLSGNIPGKKQ-QGTKIAEIEEDTKG--KAGTVSSRDNPHLSTFNLERTAFRKDSQR--W : :: .. . .. . ... .:. : . . :. .: :: .: ..... . mKIAA0 E--GLHPGPEEGEPSRQGGVKKYAKSLRKRRSFLQTDHTSQVSFPLEASASQENTDDVCY 710 720 730 740 750 760 570 580 590 600 610 620 mKIAA0 YVASDGGVVEKSGMEAPAMKVFPRGPGLGNREAEGKEDGTVEG-GADDASVLGQGD---- : .. . . ... . ::: . .: : . : ... :: . . . mKIAA0 YDREPYLTLTAPSPTVSSLQDMQGEPGLLETKALGLLASLRETKSTNPASRIMEMEPETM 770 780 790 800 810 820 630 640 650 660 670 680 mKIAA0 --RFLTD--MACVASAKDLDNPEDTDSPSCDHATKLSEAEDNVARLCDYHLAKRMSSLQS . . : .. ... . .: .:..: ... : .. .: :: :. mKIAA0 ETKSVIDSRVSSISAIRLRIDPSNTENPVTTDGSSASIPHS------PHHSNPGSSSPQA 830 840 850 860 870 690 700 710 720 730 mKIAA0 EGHFSLQSSQGSSVDTGCGPGSSSSACATPVESPLCPSMGKHMIPDASG-----KGGRYI ... : : : .. . : : .: . : . : :: : .: mKIAA0 A---QVRPFPILSPDQDPGGSTPKELTAEPEDSTF-PLSSDHPNPDNPGPHHVSQGDTSE 880 890 900 910 920 930 740 750 760 770 780 mKIAA0 SPEERAP-GHPNHGATF-EELHPQTEG-MCP-------RMTVPALHTAINADPLF-GTL- : :. : . . .:. :: : .:: . : . .::. :: . : : mKIAA0 LGEVRSEIGSESFLINHVQEVIPQITGPLCPGDGPTSGECEVNSEETALAADEVQQGQLS 940 950 960 970 980 990 790 800 810 820 830 mKIAA0 ----RDGCHRL-PKI--KETTVALTEPGKERQGGMPSAW---SPHPEADPILLPSNIHLE :. :: :.. : . : . .: ..:.: .: : . : mKIAA0 LDSDREVMHRNGPSLFQKGSGKDLGDSKGDRLDNVPQALDVRAPAGEINSSLCSEPPATG 1000 1010 1020 1030 1040 1050 840 850 860 870 880 890 mKIAA0 SKVPSPNQDPNDFSQGIQAFGEAVSWWPADLRGGSPRTPPSQRALRHSSRIL---SGPVG . ::... .. : . .. : :. : : . .: .. .:.. :.::. mKIAA0 TGRTSPDSEGENREAQEQELLTELDLAP-DFLLPSAFPPETIKA-EQLDRVIGEDSAPVS 1060 1070 1080 1090 1100 1110 900 910 920 930 940 950 mKIAA0 LETFQERTKGVVSLKYPGITEAQEVSSERRAELPLGKKLTKSFSQSSMHFISEGKFHKRS : .. : :: : .. :: : .. :. .. .. . . : .: . mKIAA0 TSQ-QVCVHTVPSL--PKLSPCQE--EPRSVDSGHGSPAESKGDSPIICLPPERSFLCFA 1120 1130 1140 1150 1160 960 970 980 990 mKIAA0 PMSHKD-----SKV--YRTLPLRKL---ESSNWRCRGPFSY--CFLN-QGQDEDGDEDEE : :: . :.: . . .. : . .:: ::: :: . : . :. : : . mKIAA0 PESHPEGSTSLSRVTSFSFAGINEVAPAEIGIEHCRCHFSYATCFRGPQPETEEEDGDPQ 1170 1180 1190 1200 1210 1220 1000 1010 1020 1030 1040 1050 mKIAA0 EGEATLQVSCLYRPQITQAMSEPGNSSLVVGLQKQGEELSRGTALKVWTEDPDGPDDLDF :. .: :. . .. : .. . . ::: . ..: : mKIAA0 THPAAPLTS---PPSAGSQVTLPWRAARAYSCTTP---LSRKS--HIWPE---------- 1230 1240 1250 1260 1060 1070 1080 1090 1100 1110 mKIAA0 SSLAFDARIARINALKANTYGMPDGFLEAQNDANELLCLVRATKARKEESRPETYDLTLS : .: : ::.. . :.::.. .. :: ...:. . .. :. : .: mKIAA0 ----FCSRALR--QLKTTPTNAPEGFVQLTESLLELQDILEASWGVGNKHPPDKCTLHFS 1270 1280 1290 1300 1310 1320 1120 1130 1140 1150 1160 1170 mKIAA0 QYKQLLSIESRQLGSACRKMAMAEKSPEEMLLAMSSSFQVLCCLTEACMRLVKVVNTETQ . .. : . :..: ..:... ..::::: :. .:: : :. :.... :. mKIAA0 ESRNRLCMGSQKLLASCQHVIRMDQSPEEMQGAVRVTFQHLVQLAGLCFQFTDCSRCSTR 1330 1340 1350 1360 1370 1380 1180 1190 1200 1210 1220 1230 mKIAA0 RQEIVAKIDEVVINYICLLKAAEAATGKTTGDPNIGLSMRHSATMAALVSTLTRSLKMLL ..:..... .:: .: ...::. . . : .. : :. ....: : ::.... mKIAA0 HREVAGNLRDVVYTYHQFVEAAKLTCERGYHDFSVKLLARQCTALTAAVFCLTQKFRAST 1390 1400 1410 1420 1430 1440 mKIAA0 NK mKIAA0 AL 1239 residues in 1 query sequences 1767778 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:17:29 2006 done: Mon Mar 27 10:17:30 2006 Scan time: 1.210 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]