# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg08250.fasta.nr -Q ../query/mKIAA0630.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0630, 603 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915389 sequences Expectation_n fit: rho(ln(x))= 6.6256+/-0.000196; mu= 5.5074+/- 0.011 mean_var=110.3576+/-20.878, 0's: 46 Z-trim: 74 B-trim: 71 in 1/63 Lambda= 0.122088 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|162770932|emb|CAP58493.1| homeodomain interacti (1176) 3951 707.0 8.6e-201 gi|162770931|emb|CAP58492.1| homeodomain interacti (1210) 3951 707.0 8.8e-201 gi|61252360|sp|O88904.2|HIPK1_MOUSE RecName: Full= (1210) 3945 705.9 1.8e-200 gi|3702956|gb|AAC63010.1| homeodomain-interacting (1209) 3921 701.7 3.4e-199 gi|158508564|ref|NP_001094456.1| homeodomain inter (1211) 3885 695.3 2.8e-197 gi|134035221|gb|ABO47654.1| homeodomain-interactin (1177) 3878 694.1 6.4e-197 gi|158513576|sp|A4L9P5.1|HIPK1_RAT RecName: Full=H (1211) 3878 694.1 6.5e-197 gi|194036437|ref|XP_001927205.1| PREDICTED: homeod ( 816) 3860 690.8 4.3e-196 gi|149708775|ref|XP_001499669.1| PREDICTED: simila (1210) 3855 690.1 1.1e-195 gi|56206714|emb|CAI22795.1| homeodomain interactin ( 816) 3846 688.4 2.4e-195 gi|20306937|gb|AAH28408.1| Homeodomain interacting ( 836) 3846 688.4 2.4e-195 gi|34395641|sp|Q86Z02.1|HIPK1_HUMAN RecName: Full= (1210) 3846 688.5 3.2e-195 gi|194380356|dbj|BAG63945.1| unnamed protein produ (1281) 3846 688.5 3.4e-195 gi|23273925|gb|AAH36057.1| Homeodomain interacting ( 816) 3843 687.8 3.4e-195 gi|21739284|emb|CAD38689.1| hypothetical protein [ ( 893) 3838 687.0 6.7e-195 gi|158508546|ref|NP_001103468.1| homeodomain inter (1210) 3838 687.1 8.6e-195 gi|114558701|ref|XP_001151260.1| PREDICTED: homeod (1210) 3835 686.5 1.2e-194 gi|119576989|gb|EAW56585.1| homeodomain interactin ( 838) 3832 685.9 1.3e-194 gi|109014451|ref|XP_001111238.1| PREDICTED: homeod (1210) 3824 684.6 4.8e-194 gi|73981048|ref|XP_856055.1| PREDICTED: similar to ( 815) 3816 683.1 9.2e-194 gi|73981044|ref|XP_533012.2| PREDICTED: similar to (1209) 3816 683.2 1.3e-193 gi|148675645|gb|EDL07592.1| homeodomain interactin ( 600) 3758 672.8 8.5e-191 gi|126311629|ref|XP_001382044.1| PREDICTED: simila (1284) 3666 656.8 1.2e-185 gi|149030441|gb|EDL85478.1| homeodomain interactin ( 536) 3429 614.8 2.2e-173 gi|118102503|ref|XP_418007.2| PREDICTED: similar t (1210) 3296 591.6 4.7e-166 gi|149616152|ref|XP_001513212.1| PREDICTED: simila ( 568) 3101 557.0 5.6e-156 gi|162770933|emb|CAP58494.1| homeodomain interacti (1165) 3054 549.0 3.1e-153 gi|5815143|gb|AAD52568.1|AF170303_1 nuclear body a (1165) 3048 547.9 6.4e-153 gi|56206713|emb|CAI22794.1| homeodomain interactin (1165) 2949 530.5 1.1e-147 gi|114558705|ref|XP_001151205.1| PREDICTED: homeod (1136) 2939 528.7 3.8e-147 gi|114558703|ref|XP_001151332.1| PREDICTED: homeod (1165) 2938 528.5 4.4e-147 gi|109014457|ref|XP_001111270.1| PREDICTED: homeod (1137) 2930 527.1 1.1e-146 gi|73981056|ref|XP_856223.1| PREDICTED: similar to (1130) 2920 525.4 3.8e-146 gi|73981050|ref|XP_856095.1| PREDICTED: similar to (1136) 2919 525.2 4.4e-146 gi|73981054|ref|XP_856178.1| PREDICTED: similar to (1158) 2919 525.2 4.4e-146 gi|73981060|ref|XP_856305.1| PREDICTED: similar to (1164) 2919 525.2 4.5e-146 gi|73981058|ref|XP_856264.1| PREDICTED: similar to (1165) 2916 524.7 6.4e-146 gi|119576991|gb|EAW56587.1| homeodomain interactin ( 762) 2898 521.4 4.1e-145 gi|119576992|gb|EAW56588.1| homeodomain interactin ( 790) 2898 521.4 4.2e-145 gi|119576993|gb|EAW56589.1| homeodomain interactin ( 701) 2805 505.0 3.3e-140 gi|56206711|emb|CAI22792.1| homeodomain interactin (1075) 2805 505.1 4.6e-140 gi|193784106|dbj|BAG53650.1| unnamed protein produ (1075) 2805 505.1 4.6e-140 gi|114558707|ref|XP_001151138.1| PREDICTED: homeod (1075) 2794 503.1 1.8e-139 gi|21542514|gb|AAH33012.1| Homeodomain interacting (1075) 2794 503.1 1.8e-139 gi|109014454|ref|XP_001111126.1| PREDICTED: homeod (1075) 2783 501.2 6.8e-139 gi|73981052|ref|XP_856135.1| PREDICTED: similar to (1079) 2757 496.6 1.6e-137 gi|82754974|gb|ABB90243.1| homeodomain-interacting ( 481) 2730 491.7 2.3e-136 gi|119576990|gb|EAW56586.1| homeodomain interactin ( 846) 2601 469.1 2.5e-129 gi|119576996|gb|EAW56592.1| homeodomain interactin ( 773) 2575 464.5 5.6e-128 gi|119576995|gb|EAW56591.1| homeodomain interactin ( 801) 2575 464.5 5.7e-128 >>gi|162770932|emb|CAP58493.1| homeodomain interacting p (1176 aa) initn: 3951 init1: 3951 opt: 3951 Z-score: 3761.2 bits: 707.0 E(): 8.6e-201 Smith-Waterman score: 3951; 99.834% identity (100.000% similar) in 603 aa overlap (1-603:574-1176) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|162 RRVHMYDTASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 550 560 570 580 590 600 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 610 620 630 640 650 660 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 670 680 690 700 710 720 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 730 740 750 760 770 780 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT 790 800 810 820 830 840 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV 850 860 870 880 890 900 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|162 TVNDSPDSDSSLSSPHSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC 910 920 930 940 950 960 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST 970 980 990 1000 1010 1020 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP 1030 1040 1050 1060 1070 1080 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 1090 1100 1110 1120 1130 1140 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::: gi|162 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1150 1160 1170 >>gi|162770931|emb|CAP58492.1| homeodomain interacting p (1210 aa) initn: 3951 init1: 3951 opt: 3951 Z-score: 3761.0 bits: 707.0 E(): 8.8e-201 Smith-Waterman score: 3951; 99.834% identity (100.000% similar) in 603 aa overlap (1-603:608-1210) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|162 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|162 TVNDSPDSDSSLSSPHSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST 1000 1010 1020 1030 1040 1050 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP 1060 1070 1080 1090 1100 1110 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 1120 1130 1140 1150 1160 1170 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::: gi|162 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1180 1190 1200 1210 >>gi|61252360|sp|O88904.2|HIPK1_MOUSE RecName: Full=Home (1210 aa) initn: 3945 init1: 3945 opt: 3945 Z-score: 3755.3 bits: 705.9 E(): 1.8e-200 Smith-Waterman score: 3945; 99.668% identity (99.834% similar) in 603 aa overlap (1-603:608-1210) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|612 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::. ::::::::::::::::::::::::::::::::::::::::::: gi|612 TVNDSPDSDSSLSSPHPTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST 1000 1010 1020 1030 1040 1050 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP 1060 1070 1080 1090 1100 1110 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 1120 1130 1140 1150 1160 1170 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::: gi|612 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1180 1190 1200 1210 >>gi|3702956|gb|AAC63010.1| homeodomain-interacting prot (1209 aa) initn: 3095 init1: 3095 opt: 3921 Z-score: 3732.5 bits: 701.7 E(): 3.4e-199 Smith-Waterman score: 3921; 99.337% identity (99.668% similar) in 603 aa overlap (1-603:608-1209) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|370 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|370 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCA-GRPALVEQTAAVLQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|370 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYEPNSSSLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|370 TVNDSPDSDSSLSSPHSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST 1000 1010 1020 1030 1040 1050 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP 1060 1070 1080 1090 1100 1110 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|370 TSAAALGSTSSIAHLFFPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 1120 1130 1140 1150 1160 1170 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::: gi|370 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1180 1190 1200 >>gi|158508564|ref|NP_001094456.1| homeodomain interacti (1211 aa) initn: 2587 init1: 2587 opt: 3885 Z-score: 3698.2 bits: 695.3 E(): 2.8e-197 Smith-Waterman score: 3885; 98.179% identity (99.007% similar) in 604 aa overlap (1-603:608-1211) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG ::::::::::: :::::::::::::::::: gi|158 QLSTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPPSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|158 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPLVPQAPAAQPLQIQSG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|158 LPSAWQQLPGVALHNSVQPTAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT ::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::::: gi|158 TLATAQPLNVGVAHVVRQQQSSSLPSRKNKQSAPVSSTSSLEVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV ::::::::::::::::::::::::::::::::::::::::::.::.:::::::::::::: gi|158 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKFKPSSSSLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::: :::::::::::::::::::: :::::::::::::::::::::: gi|158 TVNDSPDSDSSLSSPYPTDTLSALRGNSGTLLEGPGRTAADGIGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 mKIAA0 TVATQASGLLSS-KTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS : :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TGATQASGLLSSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS 1000 1010 1020 1030 1040 1050 450 460 470 480 490 500 mKIAA0 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA 1060 1070 1080 1090 1100 1110 510 520 530 540 550 560 mKIAA0 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ 1120 1130 1140 1150 1160 1170 570 580 590 600 mKIAA0 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL :::::::::::::::::::::::::::::::::: gi|158 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1180 1190 1200 1210 >>gi|134035221|gb|ABO47654.1| homeodomain-interacting pr (1177 aa) initn: 2612 init1: 2580 opt: 3878 Z-score: 3691.7 bits: 694.1 E(): 6.4e-197 Smith-Waterman score: 3878; 98.013% identity (98.841% similar) in 604 aa overlap (1-603:574-1177) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG ::::::::::: :::::::::::::::::: gi|134 RRVHMYDTASVLASSSTAAAATLSLANSDVSLLNYQSALYPPSAAPVPGVAQQGVSLQPG 550 560 570 580 590 600 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|134 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPLVPQAPAAQPLQIQSG 610 620 630 640 650 660 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|134 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVQQAWPGGTQQIL 670 680 690 700 710 720 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|134 LPSAWQQLPGVALHNSVQPTAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 730 740 750 760 770 780 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT ::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::::: gi|134 TLATAQPLNVGVAHVVRQQQSSSLPSRKNKQSAPVSSTSSLEVLPSQVYSLVGSSPLRTT 790 800 810 820 830 840 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV ::::::::::::::::::::::::::::::::::::::::::.::.:::::::::::::: gi|134 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKFKPSSSSLKARSNVISYV 850 860 870 880 890 900 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::: :::::::::::::::::::: :::::::::::::::::::::: gi|134 TVNDSPDSDSSLSSPYPTDTLSALRGNSGTLLEGPGRTAADGIGTRTIIVPPLKTQLGDC 910 920 930 940 950 960 400 410 420 430 440 mKIAA0 TVATQASGLLSS-KTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS : :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|134 TGATQASGLLSSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS 970 980 990 1000 1010 1020 450 460 470 480 490 500 mKIAA0 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA 1030 1040 1050 1060 1070 1080 510 520 530 540 550 560 mKIAA0 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ 1090 1100 1110 1120 1130 1140 570 580 590 600 mKIAA0 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL :::::::::::::::::::::::::::::::::: gi|134 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1150 1160 1170 >>gi|158513576|sp|A4L9P5.1|HIPK1_RAT RecName: Full=Homeo (1211 aa) initn: 2580 init1: 2580 opt: 3878 Z-score: 3691.5 bits: 694.1 E(): 6.5e-197 Smith-Waterman score: 3878; 98.013% identity (98.841% similar) in 604 aa overlap (1-603:608-1211) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG ::::::::::: :::::::::::::::::: gi|158 QLSTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPPSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|158 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPLVPQAPAAQPLQIQSG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|158 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVQQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|158 LPSAWQQLPGVALHNSVQPTAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT ::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::::: gi|158 TLATAQPLNVGVAHVVRQQQSSSLPSRKNKQSAPVSSTSSLEVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV ::::::::::::::::::::::::::::::::::::::::::.::.:::::::::::::: gi|158 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKFKPSSSSLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::: :::::::::::::::::::: :::::::::::::::::::::: gi|158 TVNDSPDSDSSLSSPYPTDTLSALRGNSGTLLEGPGRTAADGIGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 mKIAA0 TVATQASGLLSS-KTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS : :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TGATQASGLLSSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAS 1000 1010 1020 1030 1040 1050 450 460 470 480 490 500 mKIAA0 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TSQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAA 1060 1070 1080 1090 1100 1110 510 520 530 540 550 560 mKIAA0 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQ 1120 1130 1140 1150 1160 1170 570 580 590 600 mKIAA0 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL :::::::::::::::::::::::::::::::::: gi|158 HQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 1180 1190 1200 1210 >>gi|194036437|ref|XP_001927205.1| PREDICTED: homeodomai (816 aa) initn: 3860 init1: 3860 opt: 3860 Z-score: 3676.9 bits: 690.8 E(): 4.3e-196 Smith-Waterman score: 3860; 97.181% identity (99.171% similar) in 603 aa overlap (1-603:214-816) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|194 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 310 320 330 340 350 360 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::.:::::::::::::::.:::::::::.:::.:::::::::::::::::::::::::: gi|194 LPSTWQQLPGVALHNSVQPTAVIPEAMGSGQQLTDWRNAHSHGNQYSTIMQQPSLLTNHV 370 380 390 400 410 420 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|194 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLVGSSPLRTT 430 440 450 460 470 480 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSGLKARSNVISYV 490 500 510 520 530 540 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC ::::::::::::::::::::::::::::: : ::::: ..:: ::::::::::::::::: gi|194 TVNDSPDSDSSLSSPYSTDTLSALRGNSGPLPEGPGRVVGDGTGTRTIIVPPLKTQLGDC 550 560 570 580 590 600 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST ::::::::::::::::::::::::::::::::::::::::.::.:::::::::::::: : gi|194 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQNQQSSSAPT 610 620 630 640 650 660 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|194 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSSGHPHLAPAPAHLPSQPHLYTYAAP 670 680 690 700 710 720 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 730 740 750 760 770 780 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::.:::::::::::::::::: gi|194 QFATQSYIGSSRGSAIYTGYPLSPTKISQYSYL 790 800 810 >>gi|149708775|ref|XP_001499669.1| PREDICTED: similar to (1210 aa) initn: 3855 init1: 3855 opt: 3855 Z-score: 3669.6 bits: 690.1 E(): 1.1e-195 Smith-Waterman score: 3855; 97.015% identity (99.171% similar) in 603 aa overlap (1-603:608-1210) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|149 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 580 590 600 610 620 630 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|149 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQPG 640 650 660 670 680 690 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 700 710 720 730 740 750 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::.:::::::::::::::.:::::::::.:::::::.:::::::::::::::::::::: gi|149 LPSTWQQLPGVALHNSVQPTAVIPEAMGSGQQLADWRSAHSHGNQYSTIMQQPSLLTNHV 760 770 780 790 800 810 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::.:::::::::.:::::::::::::::::: gi|149 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQAAPVSSKSSLDVLPSQVYSLVGSSPLRTT 820 830 840 850 860 870 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::: gi|149 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKARSNVISYV 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC ::::::::::::::::::::::::::::: ::::::: ..:: ::::::::::::::::: gi|149 TVNDSPDSDSSLSSPYSTDTLSALRGNSGPLLEGPGRVVGDGTGTRTIIVPPLKTQLGDC 940 950 960 970 980 990 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST ::::::::::::::::::::::::::::::::::::::::.::.:::::::::::::: : gi|149 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQNQQSSSAPT 1000 1010 1020 1030 1040 1050 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP 1060 1070 1080 1090 1100 1110 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 1120 1130 1140 1150 1160 1170 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::.:::::::::::::::::: gi|149 QFATQSYIGSSRGSAIYTGYPLSPTKISQYSYL 1180 1190 1200 1210 >>gi|56206714|emb|CAI22795.1| homeodomain interacting pr (816 aa) initn: 3846 init1: 3846 opt: 3846 Z-score: 3663.5 bits: 688.4 E(): 2.4e-195 Smith-Waterman score: 3846; 96.683% identity (99.171% similar) in 603 aa overlap (1-603:214-816) 10 20 30 mKIAA0 SLLNYQSALYPSSAAPVPGVAQQGVSLQPG :::::::::::::::::::::::::::::: gi|562 QLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGVSLQPG 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA0 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 TTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQPLQIQSG 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 VLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQAWPGGTQQIL 310 320 330 340 350 360 160 170 180 190 200 210 mKIAA0 LPSAWQQLPGVALHNSVQPAAVIPEAMGSSQQLADWRNAHSHGNQYSTIMQQPSLLTNHV :::.:::::::::::::::.:.:::::::.:::::::::::::::::::::::::::::: gi|562 LPSTWQQLPGVALHNSVQPTAMIPEAMGSGQQLADWRNAHSHGNQYSTIMQQPSLLTNHV 370 380 390 400 410 420 220 230 240 250 260 270 mKIAA0 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLEVLPSQVYSLVGSSPLRTT :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|562 TLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPSQVYSLVGSSPLRTT 430 440 450 460 470 480 280 290 300 310 320 330 mKIAA0 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPNSSSLKARSNVISYV :::::::::::::::::::::::::::::::::::::::::::::.::.:: :::::::: gi|562 SSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYKPSSSGLKPRSNVISYV 490 500 510 520 530 540 340 350 360 370 380 390 mKIAA0 TVNDSPDSDSSLSSPYSTDTLSALRGNSGTLLEGPGRPAADGIGTRTIIVPPLKTQLGDC :::::::::::::::::::::::::::::..:::::: .::: ::::::::::::::::: gi|562 TVNDSPDSDSSLSSPYSTDTLSALRGNSGSVLEGPGRVVADGTGTRTIIVPPLKTQLGDC 550 560 570 580 590 600 400 410 420 430 440 450 mKIAA0 TVATQASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQPLNLSQNQQSSSAST :::::::::::.::::::::::::::::::::::::::::.::.::::::::::::.: : gi|562 TVATQASGLLSNKTKPVASVSGQSSGCCITPTGYRAQRGGTSAAQPLNLSQNQQSSAAPT 610 620 630 640 650 660 460 470 480 490 500 510 mKIAA0 SQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQPHLYTYAAP :::::::::::::::::::::::::.::::::::::::::::::::::::: :::::::: gi|562 SQERSSNPAPRRQQAFVAPLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQAHLYTYAAP 670 680 690 700 710 720 520 530 540 550 560 570 mKIAA0 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 TSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQH 730 740 750 760 770 780 580 590 600 mKIAA0 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL ::::::::::::::::::::::::::::::::: gi|562 QFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL 790 800 810 603 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 14:24:49 2009 done: Sun Mar 15 14:32:24 2009 Total Scan time: 1009.560 Total Display time: 0.270 Function used was FASTA [version 34.26.5 April 26, 2007]