FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0395.ptfa, 198 aa vs ./tmplib.26680 library 1768819 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.2282+/-0.00454; mu= 9.9089+/- 0.304 mean_var=95.7664+/-21.555, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.1311 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4149 ( 906 res) mfj00914 ( 906) 273 61 1.4e-10 mKIAA1443 ( 564 res) mpg01109 ( 564) 270 61 1.5e-10 mKIAA0854 ( 719 res) mbh04022 ( 719) 244 56 5.2e-09 >>mKIAA4149 ( 906 res) mfj00914 (906 aa) initn: 386 init1: 262 opt: 273 Z-score: 282.5 bits: 61.3 E(): 1.4e-10 Smith-Waterman score: 352; 33.168% identity (42.949% ungapped) in 202 aa overlap (12-174:699-893) 10 20 30 40 mKIAA0 LVEQPPSKVSYKKTAQQRHLLRQLFVQTQWPSNQDYDSIMA ::: .: :.:.. ::.::::: ..::.. mKIAA4 NVGSSKEEPGESSPGDETVAPKSGGTGKICKKTPEQLHMLKSAFVRTQWPSAEEYDKLAE 670 680 690 700 710 720 50 60 70 80 mKIAA0 QTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNF----------------PPGLLVIA ..:: : ..: ::::.::: :::.:::: :. .: : : mKIAA4 ESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSSNSSSLNGLSSLRRRGRGRPKGRGRGR 730 740 750 760 770 780 90 100 110 120 mKIAA0 P------GNR-----------------ELLQDYYMTHKMLCEEDLQTLCDKTQMSAQQVK : :.: .:.:::. ::.: :.::. : ....:. .::. mKIAA4 PRGRPRGGKRMNTWDRVPSLIKFKTGTAILKDYYLKHKFLNEQDLDELVNRSHMGYEQVR 790 800 810 820 830 840 130 140 150 160 170 180 mKIAA0 QWFAEKMGEETRAVADISSEDQGPRNGEPVAVHKVLGDAYSELSENSESWEPSAPEASSE .::::. . :. : ... .. : : . . : ...:..::: mKIAA4 EWFAER---QRRSELGIELFEENEEEDEVVDDQ----EEDEEETDDSDTWEPPRHVKRKL 850 860 870 880 890 900 190 mKIAA0 PFDTSSPQSGRQLEAD mKIAA4 SKSDD >>mKIAA1443 ( 564 res) mpg01109 (564 aa) initn: 393 init1: 258 opt: 270 Z-score: 281.9 bits: 60.5 E(): 1.5e-10 Smith-Waterman score: 323; 32.919% identity (38.129% ungapped) in 161 aa overlap (12-150:378-538) 10 20 30 40 mKIAA0 LVEQPPSKVSYKKTAQQRHLLRQLFVQTQWPSNQDYDSIMA .:: .: .:...:.: :: .:: .. mKIAA1 PQRLWNNSEPNSAGPTEYLSPDMQHQRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQ 350 360 370 380 390 400 50 60 70 80 90 mKIAA0 QTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPP--GLLVIAPGNREL-------- :::::::...::::.:::::.:::::..: . : . .:..: : mKIAA1 ITGLPRPEIIQWFGDTRYALKHGQLKWFRDNAVLGTPSFQDPAIPTPSTRSLKEWAKTPP 410 420 430 440 450 460 100 110 120 130 mKIAA0 ------------LQDYYMTHKMLCEEDLQTLCDKTQMSAQQVKQWFAEKMGEETRAVADI :. :. .:..: : :. : . ...:.::: .:: .. . ...:. . mKIAA1 LPAPPPPPDIRPLEKYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRLPKPAEVVVCL 470 480 490 500 510 520 140 150 160 170 180 190 mKIAA0 SSEDQGPRNGEPVAVHKVLGDAYSELSENSESWEPSAPEASSEPFDTSSPQSGRQLEAD . ::. .. : mKIAA1 DEEDEEDEEDELPEDGEEEEEEEEDDDDGDDDVIIWD 530 540 550 560 >>mKIAA0854 ( 719 res) mbh04022 (719 aa) initn: 353 init1: 234 opt: 244 Z-score: 254.1 bits: 55.7 E(): 5.2e-09 Smith-Waterman score: 298; 30.542% identity (33.155% ungapped) in 203 aa overlap (5-191:510-712) 10 20 30 mKIAA0 LVEQPPSKVSYKKTAQQRHLLRQLFVQTQWPSNQ : . . .. .: ::::. :..::::. : mKIAA0 SGKKGSDAVAPNGALSRLDQLSGAQLAGSLPSPSSAIVQNQEQVHLLRSTFARTQWPTPQ 480 490 500 510 520 530 40 50 60 70 80 mKIAA0 DYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPP--GLLVIA------- .::.. :.::: : :.:::: ..: ::.: :.: :.:.: .. : ... mKIAA0 EYDQLAAKTGLVRTEIVRWFKENRCLLKTGTLSWLEQYQRHHMSDDRGRDAVSRKVAKQV 540 550 560 570 580 590 90 100 110 120 130 140 mKIAA0 ---PGN-RELLQDYYMTHKMLCEEDLQTLCDKTQMSAQQVKQWFAEKMGEETRAVADISS : : : ..: : : ::: . : . ..... .:. .: : .: : .. : mKIAA0 AESPKNGSEAAHQYAKDPKALSEEDSEKLVPRMKVGGDPTKDCLAGKPSEATSDRSEGSR 600 610 620 630 640 650 150 160 170 180 190 mKIAA0 EDQGPRNGEPVAVHKVLGDAYSE---LSENSESWEPSAPEASSEPFDTSSPQSGRQLEAD . :: ...: .. . . .: .::. :: . :.. : :..: .. mKIAA0 DGQGSEENEESGIVDFVEVTVGEEDAISEKWGSWSRRVAEGTVERADSDSDSTPAEAGQA 660 670 680 690 700 710 198 residues in 1 query sequences 1768819 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:19:46 2006 done: Mon Mar 27 10:19:47 2006 Scan time: 0.420 Display time: 0.020 Function used was FASTA [version 3.4t11 Apr 17, 2002]