# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg08081.fasta.nr -Q ../query/mKIAA1160.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1160, 300 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918254 sequences Expectation_n fit: rho(ln(x))= 5.6849+/-0.000189; mu= 7.6841+/- 0.011 mean_var=95.9617+/-18.663, 0's: 36 Z-trim: 40 B-trim: 240 in 2/65 Lambda= 0.130926 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109098078|ref|XP_001094091.1| PREDICTED: simila ( 362) 1873 363.6 3.1e-98 gi|97053782|sp|Q69ZQ2.2|ISY1_MOUSE RecName: Full=P ( 285) 1867 362.3 5.7e-98 gi|12857516|dbj|BAB31028.1| unnamed protein produc ( 285) 1863 361.6 9.6e-98 gi|149728235|ref|XP_001488868.1| PREDICTED: simila ( 285) 1852 359.5 4e-97 gi|73984508|ref|XP_541743.2| PREDICTED: similar to ( 285) 1843 357.8 1.3e-96 gi|81884561|sp|Q6AYB3.1|ISY1_RAT RecName: Full=Pre ( 284) 1840 357.2 1.9e-96 gi|73984510|ref|XP_849089.1| PREDICTED: similar to ( 331) 1835 356.4 4.2e-96 gi|97053737|sp|Q9ULR0.2|ISY1_HUMAN RecName: Full=P ( 331) 1833 356.0 5.4e-96 gi|119914938|ref|XP_001251393.1| PREDICTED: simila ( 284) 1769 343.8 2.1e-92 gi|126336520|ref|XP_001378421.1| PREDICTED: simila ( 396) 1702 331.3 1.7e-88 gi|50754283|ref|XP_414311.1| PREDICTED: hypothetic ( 280) 1671 325.3 7.8e-87 gi|38174132|gb|AAH61420.1| Hypothetical protein MG ( 282) 1605 312.9 4.4e-83 gi|89268274|emb|CAJ81535.1| novel protein similar ( 282) 1601 312.1 7.5e-83 gi|49117069|gb|AAH72869.1| MGC80278 protein [Xenop ( 284) 1591 310.2 2.8e-82 gi|133777418|gb|AAI15266.1| Rab43 protein [Danio r ( 285) 1549 302.3 6.8e-80 gi|210096514|gb|EEA44658.1| hypothetical protein B ( 277) 1321 259.2 6.2e-67 gi|224042658|ref|XP_002191838.1| PREDICTED: ISY1 s ( 370) 1319 258.9 9.9e-67 gi|215491630|gb|EEC01271.1| conserved hypothetical ( 292) 1308 256.8 3.5e-66 gi|156224573|gb|EDO45398.1| predicted protein [Nem ( 282) 1255 246.7 3.5e-63 gi|198432969|ref|XP_002129141.1| PREDICTED: simila ( 280) 1205 237.3 2.5e-60 gi|47212428|emb|CAF93584.1| unnamed protein produc ( 366) 1204 237.2 3.4e-60 gi|91090798|ref|XP_970469.1| PREDICTED: similar to ( 274) 1202 236.7 3.6e-60 gi|119599687|gb|EAW79281.1| hCG2022580, isoform CR ( 180) 1138 224.5 1.1e-56 gi|119599688|gb|EAW79282.1| hCG2022580, isoform CR ( 226) 1138 224.6 1.3e-56 gi|119599686|gb|EAW79280.1| hCG2022580, isoform CR ( 226) 1130 223.1 3.8e-56 gi|108876902|gb|EAT41127.1| conserved hypothetical ( 274) 1113 219.9 4.1e-55 gi|194152034|gb|EDW67468.1| GJ23062 [Drosophila vi ( 274) 1107 218.8 9e-55 gi|193915613|gb|EDW14480.1| GI24285 [Drosophila mo ( 273) 1100 217.5 2.2e-54 gi|167879286|gb|EDS42669.1| pre-mRNA-splicing fact ( 276) 1100 217.5 2.3e-54 gi|190652714|gb|EDV49969.1| GG17474 [Drosophila er ( 272) 1097 216.9 3.3e-54 gi|194102604|gb|EDW24647.1| GL23279 [Drosophila pe ( 274) 1097 216.9 3.3e-54 gi|193894470|gb|EDV93336.1| GH19249 [Drosophila gr ( 273) 1096 216.7 3.8e-54 gi|19527549|gb|AAL89889.1| RE31520p [Drosophila me ( 272) 1092 215.9 6.4e-54 gi|194200235|gb|EDX13811.1| GD20890 [Drosophila si ( 272) 1088 215.2 1.1e-53 gi|190627488|gb|EDV43012.1| GF18268 [Drosophila an ( 273) 1087 215.0 1.2e-53 gi|194170017|gb|EDW84918.1| GK12885 [Drosophila wi ( 275) 1087 215.0 1.2e-53 gi|194121033|gb|EDW43076.1| GM26367 [Drosophila se ( 272) 1083 214.2 2.1e-53 gi|210119085|gb|EEA66812.1| hypothetical protein B ( 220) 1050 207.9 1.3e-51 gi|156543896|ref|XP_001607041.1| PREDICTED: simila ( 259) 1031 204.4 1.8e-50 gi|157017633|gb|EAA44738.3| AGAP004225-PA [Anophel ( 241) 979 194.6 1.6e-47 gi|193603611|ref|XP_001952419.1| PREDICTED: simila ( 275) 965 192.0 1.1e-46 gi|190585851|gb|EDV25919.1| hypothetical protein T ( 258) 948 188.7 9.5e-46 gi|188529323|gb|ACD62407.1| ISY1 splicing factor-l ( 237) 946 188.3 1.2e-45 gi|212515745|gb|EEB17835.1| conserved hypothetical ( 168) 944 187.8 1.2e-45 gi|18490441|gb|AAH22597.1| Isy1 protein [Mus muscu ( 146) 937 186.4 2.6e-45 gi|148666811|gb|EDK99227.1| RIKEN cDNA 5830446M03, ( 141) 930 185.1 6.4e-45 gi|13938521|gb|AAH07409.1| ISY1 protein [Homo sapi ( 307) 932 185.8 8.8e-45 gi|162675655|gb|EDQ62148.1| predicted protein [Phy ( 292) 909 181.4 1.7e-43 gi|221127654|ref|XP_002160972.1| PREDICTED: simila ( 274) 903 180.2 3.6e-43 gi|158588989|gb|EDP28167.1| Isy1-like splicing fam ( 262) 887 177.2 2.8e-42 >>gi|109098078|ref|XP_001094091.1| PREDICTED: similar to (362 aa) initn: 1873 init1: 1873 opt: 1873 Z-score: 1920.0 bits: 363.6 E(): 3.1e-98 Smith-Waterman score: 1873; 97.270% identity (99.659% similar) in 293 aa overlap (8-300:70-362) 10 20 30 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEE ..:::. ::::::::::::::::::::::: gi|109 SVCGQLESSVPVSVGIFWACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEE 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLR 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA1 EKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLP 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA1 PPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEK 220 230 240 250 260 270 220 230 240 250 260 270 mKIAA1 EEEEEEEEEINIYAVTEEESDEEGNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKME ::::::::::::::::::::::::.:::.:.::::::::::::::::::::::::::::: gi|109 EEEEEEEEEINIYAVTEEESDEEGSQEKGGDDGQQKFIAHVPVPSQQEIEEALVRRKKME 280 290 300 310 320 330 280 290 300 mKIAA1 LLQKYASETLQAQSEEAKRLLGY :::::::::::::::::.::::: gi|109 LLQKYASETLQAQSEEARRLLGY 340 350 360 >>gi|97053782|sp|Q69ZQ2.2|ISY1_MOUSE RecName: Full=Pre-m (285 aa) initn: 1867 init1: 1867 opt: 1867 Z-score: 1915.2 bits: 362.3 E(): 5.7e-98 Smith-Waterman score: 1867; 100.000% identity (100.000% similar) in 285 aa overlap (16-300:1-285) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|970 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY 230 240 250 260 270 280 >>gi|12857516|dbj|BAB31028.1| unnamed protein product [M (285 aa) initn: 1863 init1: 1863 opt: 1863 Z-score: 1911.1 bits: 361.6 E(): 9.6e-98 Smith-Waterman score: 1863; 99.649% identity (100.000% similar) in 285 aa overlap (16-300:1-285) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|128 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|128 MLDHEGKEVPGNRGYKYFGAAKDLPGVKELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY 230 240 250 260 270 280 >>gi|149728235|ref|XP_001488868.1| PREDICTED: similar to (285 aa) initn: 1852 init1: 1852 opt: 1852 Z-score: 1899.9 bits: 359.5 E(): 4e-97 Smith-Waterman score: 1852; 99.298% identity (99.649% similar) in 285 aa overlap (16-300:1-285) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|149 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY : :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GIQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY 230 240 250 260 270 280 >>gi|73984508|ref|XP_541743.2| PREDICTED: similar to CG9 (285 aa) initn: 1843 init1: 1843 opt: 1843 Z-score: 1890.7 bits: 357.8 E(): 1.3e-96 Smith-Waterman score: 1843; 98.596% identity (99.649% similar) in 285 aa overlap (16-300:1-285) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|739 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::.:: ::::::::::::::::::::::::::::::::::::::::: gi|739 DDGVIVPLEQEYEKKFRAGLVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :.:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY 230 240 250 260 270 280 >>gi|81884561|sp|Q6AYB3.1|ISY1_RAT RecName: Full=Pre-mRN (284 aa) initn: 1395 init1: 1395 opt: 1840 Z-score: 1887.7 bits: 357.2 E(): 1.9e-96 Smith-Waterman score: 1840; 98.947% identity (99.649% similar) in 285 aa overlap (16-300:1-284) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|818 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE ::::::::::::::.:::::::::::::::::::::::::::::: :::::::::::::: gi|818 DDGVIVPLEQEYEKRLRAELVEKWKAEREARLARGEKEEEEEEEE-INIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GSQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY 230 240 250 260 270 280 >>gi|73984510|ref|XP_849089.1| PREDICTED: similar to CG9 (331 aa) initn: 1835 init1: 1835 opt: 1835 Z-score: 1881.7 bits: 356.4 E(): 4.2e-96 Smith-Waterman score: 1835; 98.592% identity (99.648% similar) in 284 aa overlap (16-299:1-284) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|739 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::.:: ::::::::::::::::::::::::::::::::::::::::: gi|739 DDGVIVPLEQEYEKKFRAGLVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :.:::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGC 230 240 250 260 270 280 gi|739 RSGTQLARSDSAPSPRATTAVPTGPSSLTTSPRGAPFCLCLTGLRM 290 300 310 320 330 >>gi|97053737|sp|Q9ULR0.2|ISY1_HUMAN RecName: Full=Pre-m (331 aa) initn: 1833 init1: 1833 opt: 1833 Z-score: 1879.7 bits: 356.0 E(): 5.4e-96 Smith-Waterman score: 1833; 98.239% identity (100.000% similar) in 284 aa overlap (16-299:1-284) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|970 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :.:::.:.:.::::::::::::::::::::::::::::::::::::::::::::.:::: gi|970 GSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLGC 230 240 250 260 270 280 gi|970 RSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM 290 300 310 320 330 >>gi|119914938|ref|XP_001251393.1| PREDICTED: similar to (284 aa) initn: 1373 init1: 1373 opt: 1769 Z-score: 1815.2 bits: 343.8 E(): 2.1e-92 Smith-Waterman score: 1769; 95.070% identity (98.239% similar) in 284 aa overlap (16-299:1-283) 10 20 30 40 50 60 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW ::::::::::::::::::::::::::::::::::::::::::::: gi|119 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKW 10 20 30 40 70 80 90 100 110 120 mKIAA1 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 DDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEE ::::::::::::::. :::::::::::::::::::: ::: :::::.:::::.::::::: gi|119 DDGVIVPLEQEYEKRHRAELVEKWKAEREARLARGE-EEEGEEEEEVNIYAVAEEESDEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLGY :. . .::::.:::::::::::::::::::::::::::::::.:::::::::::.:::: gi|119 GGPDGGGEDGRQKFIAHVPVPSQQEIEEALVRRKKMELLQKYTSETLQAQSEEARRLLGC 230 240 250 260 270 280 >>gi|126336520|ref|XP_001378421.1| PREDICTED: similar to (396 aa) initn: 1750 init1: 1314 opt: 1702 Z-score: 1744.9 bits: 331.3 E(): 1.7e-88 Smith-Waterman score: 1702; 91.228% identity (96.140% similar) in 285 aa overlap (16-300:115-396) 10 20 30 40 mKIAA1 ARCVAERRQGALAGTMARNAEKAMTALARFRQAQLEEGKVKERRP .::::::::::::::::::::::::::::: gi|126 CPKSLDRERMIECQRLQRSRRLRIEEGPLDLARNAEKAMTALARFRQAQLEEGKVKERRP 90 100 110 120 130 140 50 60 70 80 90 100 mKIAA1 FLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVR 150 160 170 180 190 200 110 120 130 140 150 160 mKIAA1 IKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAE 210 220 230 240 250 260 170 180 190 200 210 220 mKIAA1 LMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEE :::::: ::::: :::::.. :::::.:::. :: :::::::::::::::.::::::: gi|126 LMKAIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKAEREARLARGDKEEEEEE-- 270 280 290 300 310 320 230 240 250 260 270 280 mKIAA1 EINIYAVTEEESDEEGNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASE ::::::...:::::. .:: ::.:::::::::::::::::::::::::::::::::::: gi|126 -INIYAVNDDESDEESAKEKEGEEGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASE 330 340 350 360 370 380 290 300 mKIAA1 TLQAQSEEAKRLLGY :: :::::::::::. gi|126 TLLAQSEEAKRLLGF 390 300 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 00:04:50 2009 done: Fri Mar 13 00:10:36 2009 Total Scan time: 800.070 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]