FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA2027.ptfa, 817 aa vs ./tmplib.26680 library 1768200 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.9140+/-0.00629; mu= -1.7470+/- 0.416 mean_var=261.0798+/-62.414, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0794 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1893 ( 969 res) mfj37191 ( 969) 336 52 3.6e-07 >>mKIAA1893 ( 969 res) mfj37191 (969 aa) initn: 326 init1: 211 opt: 336 Z-score: 221.1 bits: 52.1 E(): 3.6e-07 Smith-Waterman score: 388; 22.592% identity (25.815% ungapped) in 841 aa overlap (39-814:168-968) 10 20 30 40 50 60 mKIAA2 AQRGTPHRSRPVQPRTHPYGFPLSSNYFPVENIL-GIDTGAILERGPMGTVPDPLRVTKA :..: : : .: ::: :: mKIAA1 VFSGKMDGNSLKQADSTSTRKEEAGSLRNEESMLKGKAEPMIYGKGEPGTVG---RVD-- 140 150 160 170 180 190 70 80 90 100 110 120 mKIAA2 SIVAASGKEESRGESQSVSPQPAQPDNNASGIGNVPAELSLQLSAAAQALMQACVSESSQ .::: :.: . .. : .. : . : :. . ... .... :. . . . mKIAA1 --CTASGAENSGSLGKVDMPCSSKVDIVSPGGDNAGSLRKVETISSGK--MDPKTENVMH 200 210 220 230 240 130 140 150 160 170 mKIAA2 QDMASPGVFSEGEPVSPKQ---KTPDDFLLHGSKESA-------APGLNATAQKELISAP . :: .::. :: .. : ::. ..:.. .:: .... ::.:. mKIAA1 SRRERPGSTGEGDLVSLRENDMKPPDNTDSASTKKTDPEFSGKLTPG--SSGKTELVSS- 250 260 270 280 290 300 180 190 200 210 220 230 mKIAA2 CLISVVQHTHHAIQRDAPNTSTCAVPEGSLVKSEANSNGENPEKPGCPARVTCCSSKN-Q ..:. : . .. : : : : . . .: ..:. : :. . . . mKIAA1 --VTVAPVTSENVN---PVCSGGAGPAAVGNSETLSSVKKDPQLLGKKEAVSSGEGGSVS 310 320 330 340 350 360 240 250 260 270 280 290 mKIAA2 EGLCDFPSPENSQGILQTP-DIASPSADRPEGEGQKV-INNITAVSSEPPVREGCSENKQ . . : .. .:.. . : .: .. : :... : . : :: : : . .. .. mKIAA1 VRMAETVSARQPEGMFPAKTDSTSSNSTGPSGRADPVSLRNSELVSPVKPERLSSGQAER 370 380 390 400 410 420 300 310 320 330 340 mKIAA2 PSATALNTTAERSENPPPS----HLTSKGATCSSEARQALLPAQYPVSRFKEASTMTCQ- : . .: . .:.: : : : : .:. . .. .. . ..: . mKIAA1 VSLVKTETLSSGKEDPRSSRRVDHTTVTGNMQTSQKGNPESSGKTDLGSSSSGDTRSLGT 430 440 450 460 470 480 350 360 370 380 390 400 mKIAA2 --AESGAK-EVS-GRA----WQDAEVQAVASVESRSVSTSPSILPAYLKENPAPELENGQ . :.:: ::. :.. :. : . : ... . : . : . :. .: ... mKIAA1 WGSLSAAKAEVTEGKGDPQPWKKASLPASEKTDPLASSKAGSASQGK-AETVSPGEVDAM 490 500 510 520 530 410 420 430 440 450 460 mKIAA2 EQLRVICHGKGSGNHLLELSNSMVDSQESRQCPSIVPQVHIQAATATPAAFKGGCKPANQ ... ..:. . . ... :.... : . :. .. .. . : ... mKIAA1 TLGKTVPTSSGKTALVSPGKVDLMTSERAEGIPEL--QASEKGNPVNSTRVDTGATGSTE 540 550 560 570 580 590 470 480 490 500 510 mKIAA2 PAEGLK--SPLIHVTSSQNTET----EEDLRLSASKEATSR--QPEGTNP-DFQKANAIG : :.: . . .:: ..:: .:. .:: . . . . : ..: .. ::.. . mKIAA1 PKSGVKVITQIPGATSPGKVETPSLQKEQPQLSEKTDPSRKVDPPTTVEPVSLGKADSAS 600 610 620 630 640 650 520 530 540 550 560 570 mKIAA2 QISLPAGSQAEINQGLWNSGPREPEIVVKTAKDHKAESSCKPSNSGGGANKDYPPESLDP :. .:: .: .. :. :. :: :: . :. : .. :. : mKIAA1 ----PSPRKAE-SQTSAKTVPQAPD---------KATSSLRQSD--GTPYSSAQPQR-DT 660 670 680 690 700 580 590 600 610 620 mKIAA2 TDKKGAKDKKPASPLIVKDHAPGA---TSTLDAKTLLLNPKSQVKEGEGPEVSPAPSPGR . . ...:.. :: : .: . . .: . .:... . ..: . . : : mKIAA1 RSIGSLPEREPSASTSQKDLAAAAAQKSPSAEAAAPPPGPRTRDNFTKAPSWDAGAPPPR 710 720 730 740 750 760 630 640 650 660 670 680 mKIAA2 KSQQNTLEELRQPKTVMSLSLPSDGTGDS--SPGSGKRTPSLSVKASPRR--GSRVSEFL .. . ....: :.::.: : .. :.:: . . :: : .:: mKIAA1 EDAGTQAGAQACVSVAVSPMSPQDGAGGPAFSFQAAPRAPSPAPRPPSRRDAGLQVSLGA 770 780 790 800 810 820 690 700 710 720 730 mKIAA2 KELSVTA-------AAAQVGLTP--GEKKKQLG---ADSKLHLKQSKRVRDVVWDDQGMT : .: ::: .. : : . . : : . . .. :::: ::..::: mKIAA1 AETRSVATGPMTPQAAAPPAVPPVFPEVRVRPGSVLAAALAPQEATEPVRDVSWDEKGMT 830 840 850 860 870 880 740 750 760 770 780 mKIAA2 WEVYGASLDPESLGVAIQNHLQRQIREHEK----------IVKTQSGQTRRSISSDSSSS :::::::.. : ::.:::.::.:::.:: . :.. : :. : .. . mKIAA1 WEVYGASMEVEVLGMAIQKHLERQIEEHGRQGAPAPAPPPAVRAGPG---RAGSVRTAPA 890 900 910 920 930 790 800 810 mKIAA2 KKLKGRQHGVLQSMLQNFRRPNCCVRPAPSSVLD . : :.....::. ::: :: : .:.. mKIAA1 EGAAKRPPGLFRALLQSVRRPRCCSRAGPTAE 940 950 960 817 residues in 1 query sequences 1768200 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:57:59 2006 done: Mon Mar 27 10:58:01 2006 Scan time: 0.930 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]