# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg07839.fasta.nr -Q ../query/mKIAA4253.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4253, 261 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921068 sequences Expectation_n fit: rho(ln(x))= 5.0626+/-0.000186; mu= 9.7620+/- 0.010 mean_var=67.5811+/-13.407, 0's: 24 Z-trim: 26 B-trim: 1185 in 2/65 Lambda= 0.156013 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|12860126|dbj|BAB31853.1| unnamed protein produc ( 398) 1713 394.0 2e-107 gi|21541548|gb|AAM61881.1|AF516607_1 b-tomosyn [Mu ( 928) 1713 394.3 3.9e-107 gi|158749547|ref|NP_001074813.2| syntaxin binding (1116) 1713 394.4 4.5e-107 gi|148671583|gb|EDL03530.1| mCG116242 [Mus musculu (1135) 1713 394.4 4.5e-107 gi|82582272|sp|Q8K400.2|STXB5_MOUSE RecName: Full= (1152) 1713 394.4 4.6e-107 gi|4689231|gb|AAD27819.1|AF118890_1 s-tomosyn isof (1099) 1698 391.0 4.6e-106 gi|3790389|gb|AAD04756.1| m-tomosyn [Rattus norveg (1116) 1698 391.0 4.7e-106 gi|149039540|gb|EDL93702.1| syntaxin binding prote (1136) 1698 391.0 4.7e-106 gi|81917877|sp|Q9WU70.1|STXB5_RAT RecName: Full=Sy (1152) 1698 391.0 4.8e-106 gi|194670166|ref|XP_617776.4| PREDICTED: syntaxin (1116) 1687 388.5 2.6e-105 gi|73946117|ref|XP_533442.2| PREDICTED: similar to (1260) 1684 387.9 4.5e-105 gi|16550217|dbj|BAB70930.1| unnamed protein produc ( 398) 1678 386.2 4.7e-105 gi|194227604|ref|XP_001915881.1| PREDICTED: simila (1143) 1682 387.4 5.8e-105 gi|126311182|ref|XP_001381100.1| PREDICTED: simila (1120) 1681 387.2 6.6e-105 gi|21748731|dbj|BAC03475.1| unnamed protein produc ( 637) 1678 386.3 6.8e-105 gi|76879717|dbj|BAE45727.1| putative protein produ ( 786) 1678 386.4 8e-105 gi|119568208|gb|EAW47823.1| syntaxin binding prote ( 806) 1678 386.4 8.1e-105 gi|193785574|dbj|BAG54632.1| unnamed protein produ ( 806) 1678 386.4 8.1e-105 gi|56206220|emb|CAI20239.1| syntaxin binding prote (1098) 1678 386.5 1e-104 gi|56206221|emb|CAI20240.1| syntaxin binding prote (1115) 1678 386.5 1.1e-104 gi|109730461|gb|AAI13409.1| Syntaxin binding prote (1115) 1678 386.5 1.1e-104 gi|119568207|gb|EAW47822.1| syntaxin binding prote (1139) 1678 386.5 1.1e-104 gi|74762236|sp|Q5T5C0.1|STXB5_HUMAN RecName: Full= (1151) 1678 386.5 1.1e-104 gi|194033470|ref|XP_001927884.1| PREDICTED: simila (1115) 1673 385.3 2.3e-104 gi|149409984|ref|XP_001507080.1| PREDICTED: simila (1121) 1673 385.4 2.3e-104 gi|224047918|ref|XP_002196809.1| PREDICTED: syntax (1114) 1629 375.4 2.2e-101 gi|224047916|ref|XP_002196819.1| PREDICTED: syntax (1150) 1629 375.5 2.3e-101 gi|114540264|gb|ABI75228.1| STXBP5 [Bos taurus] ( 655) 1591 366.7 5.4e-99 gi|119568206|gb|EAW47821.1| syntaxin binding prote (1185) 1586 365.8 1.9e-98 gi|118088350|ref|XP_419658.2| PREDICTED: similar t (1115) 1543 356.1 1.5e-95 gi|148725295|emb|CAN88107.1| novel protein similar (1128) 1498 346.0 1.7e-92 gi|189522741|ref|XP_700662.3| PREDICTED: similar t (1114) 1427 330.0 1.1e-87 gi|126325871|ref|XP_001371086.1| PREDICTED: simila (1106) 1397 323.2 1.1e-85 gi|194222795|ref|XP_001500511.2| PREDICTED: syntax (1186) 1389 321.4 4.2e-85 gi|194664063|ref|XP_616879.4| PREDICTED: similar t (1185) 1386 320.8 6.7e-85 gi|90079659|dbj|BAE89509.1| unnamed protein produc ( 586) 1373 317.6 2.9e-84 gi|49619201|gb|AAT68172.1| tomosyn 2 splice varian (1104) 1374 318.0 4.1e-84 gi|49619203|gb|AAT68174.1| tomosyn 2 splice varian (1128) 1374 318.1 4.2e-84 gi|49619202|gb|AAT68173.1| tomosyn 2 splice varian (1161) 1374 318.1 4.3e-84 gi|81909525|sp|Q5DQR4.1|STB5L_MOUSE RecName: Full= (1185) 1374 318.1 4.4e-84 gi|109494439|ref|XP_001070379.1| PREDICTED: simila (1248) 1374 318.1 4.6e-84 gi|34783514|gb|AAH37531.1| STXBP5L protein [Homo s ( 753) 1367 316.4 9.1e-84 gi|194383224|dbj|BAG59168.1| unnamed protein produ (1162) 1367 316.5 1.3e-83 gi|82582271|sp|Q9Y2K9.2|STB5L_HUMAN RecName: Full= (1186) 1367 316.5 1.3e-83 gi|119599923|gb|EAW79517.1| hCG16779, isoform CRA_ (1227) 1367 316.5 1.3e-83 gi|114588665|ref|XP_516678.2| PREDICTED: syntaxin (1303) 1367 316.5 1.4e-83 gi|82232874|sp|Q5SQE2.1|STB5L_DANRE RecName: Full= (1159) 1314 304.6 5e-80 gi|149060534|gb|EDM11248.1| syntaxin binding prote (1148) 1281 297.1 8.5e-78 gi|148665540|gb|EDK97956.1| syntaxin binding prote (1148) 1281 297.1 8.5e-78 gi|215504221|gb|EEC13715.1| tomosyn, putative [Ixo ( 780) 981 229.5 1.3e-57 >>gi|12860126|dbj|BAB31853.1| unnamed protein product [M (398 aa) initn: 1713 init1: 1713 opt: 1713 Z-score: 2085.0 bits: 394.0 E(): 2e-107 Smith-Waterman score: 1713; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:138-398) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|128 MAFLDATGCLMSPAYEPWKEHNVAEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 110 120 130 140 150 160 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 170 180 190 200 210 220 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 230 240 250 260 270 280 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 290 300 310 320 330 340 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 350 360 370 380 390 >>gi|21541548|gb|AAM61881.1|AF516607_1 b-tomosyn [Mus mu (928 aa) initn: 1713 init1: 1713 opt: 1713 Z-score: 2079.8 bits: 394.3 E(): 3.9e-107 Smith-Waterman score: 1713; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:668-928) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|215 MAFLDATGCLMSPAYEPWKEHNVAEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|215 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|215 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|215 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 820 830 840 850 860 870 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|215 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 880 890 900 910 920 >>gi|158749547|ref|NP_001074813.2| syntaxin binding prot (1116 aa) initn: 1713 init1: 1713 opt: 1713 Z-score: 2078.7 bits: 394.4 E(): 4.5e-107 Smith-Waterman score: 1713; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:856-1116) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|158 MAFLDATGCLMSPAYEPWKEHNVAEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 830 840 850 860 870 880 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 890 900 910 920 930 940 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 950 960 970 980 990 1000 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1010 1020 1030 1040 1050 1060 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1070 1080 1090 1100 1110 >>gi|148671583|gb|EDL03530.1| mCG116242 [Mus musculus] (1135 aa) initn: 1713 init1: 1713 opt: 1713 Z-score: 2078.6 bits: 394.4 E(): 4.5e-107 Smith-Waterman score: 1713; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:875-1135) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|148 MAFLDATGCLMSPAYEPWKEHNVAEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 850 860 870 880 890 900 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 910 920 930 940 950 960 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 970 980 990 1000 1010 1020 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1030 1040 1050 1060 1070 1080 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1090 1100 1110 1120 1130 >>gi|82582272|sp|Q8K400.2|STXB5_MOUSE RecName: Full=Synt (1152 aa) initn: 1713 init1: 1713 opt: 1713 Z-score: 2078.5 bits: 394.4 E(): 4.6e-107 Smith-Waterman score: 1713; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:892-1152) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|825 MAFLDATGCLMSPAYEPWKEHNVAEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 870 880 890 900 910 920 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 930 940 950 960 970 980 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 990 1000 1010 1020 1030 1040 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1050 1060 1070 1080 1090 1100 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1110 1120 1130 1140 1150 >>gi|4689231|gb|AAD27819.1|AF118890_1 s-tomosyn isoform (1099 aa) initn: 1698 init1: 1698 opt: 1698 Z-score: 2060.5 bits: 391.0 E(): 4.6e-106 Smith-Waterman score: 1698; 98.851% identity (100.000% similar) in 261 aa overlap (1-261:839-1099) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|468 MAFLDAAGCLMPPAYEPWTEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 810 820 830 840 850 860 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::.:::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|468 KQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 870 880 890 900 910 920 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|468 DVYYLPLTNMRIARTFCFANSGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 930 940 950 960 970 980 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|468 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 990 1000 1010 1020 1030 1040 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|468 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1050 1060 1070 1080 1090 >>gi|3790389|gb|AAD04756.1| m-tomosyn [Rattus norvegicus (1116 aa) initn: 1698 init1: 1698 opt: 1698 Z-score: 2060.4 bits: 391.0 E(): 4.7e-106 Smith-Waterman score: 1698; 98.851% identity (100.000% similar) in 261 aa overlap (1-261:856-1116) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|379 MAFLDAAGCLMPPAYEPWTEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 830 840 850 860 870 880 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::.:::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|379 KQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 890 900 910 920 930 940 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|379 DVYYLPLTNMRIARTFCFANSGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 950 960 970 980 990 1000 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1010 1020 1030 1040 1050 1060 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1070 1080 1090 1100 1110 >>gi|149039540|gb|EDL93702.1| syntaxin binding protein 5 (1136 aa) initn: 1698 init1: 1698 opt: 1698 Z-score: 2060.3 bits: 391.0 E(): 4.7e-106 Smith-Waterman score: 1698; 98.851% identity (100.000% similar) in 261 aa overlap (1-261:876-1136) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|149 MAFLDAAGCLMPPAYEPWTEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 850 860 870 880 890 900 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::.:::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 910 920 930 940 950 960 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 DVYYLPLTNMRIARTFCFANSGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 970 980 990 1000 1010 1020 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1030 1040 1050 1060 1070 1080 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1090 1100 1110 1120 1130 >>gi|81917877|sp|Q9WU70.1|STXB5_RAT RecName: Full=Syntax (1152 aa) initn: 1698 init1: 1698 opt: 1698 Z-score: 2060.2 bits: 391.0 E(): 4.8e-106 Smith-Waterman score: 1698; 98.851% identity (100.000% similar) in 261 aa overlap (1-261:892-1152) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|819 MAFLDAAGCLMPPAYEPWTEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 870 880 890 900 910 920 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::.:::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL 930 940 950 960 970 980 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|819 DVYYLPLTNMRIARTFCFANSGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 990 1000 1010 1020 1030 1040 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1050 1060 1070 1080 1090 1100 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF 1110 1120 1130 1140 1150 >>gi|194670166|ref|XP_617776.4| PREDICTED: syntaxin bind (1116 aa) initn: 1687 init1: 1687 opt: 1687 Z-score: 2047.0 bits: 388.5 E(): 2.6e-105 Smith-Waterman score: 1687; 97.318% identity (100.000% similar) in 261 aa overlap (1-261:856-1116) 10 20 30 mKIAA4 EKLKKRRPVSVSPSSSQEISENQYAVICSE :::::::::::::::::::::::::::::: gi|194 MAFLDSTGCLVPPAHEPWKEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSE 830 840 850 860 870 880 40 50 60 70 80 90 mKIAA4 KQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLL :::::.:::.:.:::::::::::::::::::.::::.::::::::::::::::::::::: gi|194 KQAKVISLPSQNCAYKQNITETSFVLRGDIVSLSNSICLACFCANGHIMTFSLPSLRPLL 890 900 910 920 930 940 100 110 120 130 140 150 mKIAA4 DVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 DVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETP 950 960 970 980 990 1000 160 170 180 190 200 210 mKIAA4 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGE 1010 1020 1030 1040 1050 1060 220 230 240 250 260 mKIAA4 LARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF :::::::::::::::::::::::::.::::::::::::::::::::::::: gi|194 LARARLALDERGQKLSDLEERTAAMLSSADSFSKHAHEMMLKYKDKKWYQF 1070 1080 1090 1100 1110 261 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 08:30:23 2009 done: Wed Mar 18 08:35:47 2009 Total Scan time: 756.680 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]