# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg07578.fasta.nr -Q ../query/mKIAA1056.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1056, 230 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916768 sequences Expectation_n fit: rho(ln(x))= 6.4726+/-0.000197; mu= 3.1102+/- 0.011 mean_var=109.8682+/-20.983, 0's: 32 Z-trim: 37 B-trim: 77 in 1/65 Lambda= 0.122360 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148704362|gb|EDL36309.1| mCG133735 [Mus musculu (2466) 1580 289.4 3.5e-75 gi|94397546|ref|XP_982057.1| PREDICTED: similar to (2562) 1530 280.6 1.6e-72 gi|85677391|dbj|BAE78491.1| ZFH-5 [Mus musculus] (2562) 1529 280.4 1.8e-72 gi|149063945|gb|EDM14215.1| rCG23518 [Rattus norve (2168) 1329 245.0 6.8e-62 gi|149274619|ref|NP_001092273.1| zinc finger homeo (2558) 1329 245.1 7.7e-62 gi|169207217|ref|XP_001715032.1| PREDICTED: simila (2790) 1128 209.6 4e-51 gi|12698145|dbj|BAB21899.1| hypothetical protein [ ( 329) 1101 204.2 2e-50 gi|124297719|gb|AAI31534.1| ZNF409 protein [Homo s ( 408) 1102 204.5 2.1e-50 gi|119586548|gb|EAW66144.1| zinc finger homeobox 2 ( 862) 1102 204.7 3.8e-50 gi|119586546|gb|EAW66142.1| zinc finger homeobox 2 ( 862) 1102 204.7 3.8e-50 gi|28380242|sp|Q9UPU6.1|ZN409_HUMAN RecName: Full= ( 862) 1102 204.7 3.8e-50 gi|119586549|gb|EAW66145.1| zinc finger homeobox 2 (2706) 1102 205.0 9.4e-50 gi|73962637|ref|XP_547735.2| PREDICTED: similar to (2526) 1040 194.1 1.7e-46 gi|194670483|ref|XP_589218.4| PREDICTED: similar t (2626) 1038 193.7 2.3e-46 gi|67967655|dbj|BAE00310.1| unnamed protein produc ( 557) 908 170.3 5.5e-40 gi|126277446|ref|XP_001369416.1| PREDICTED: simila (2563) 827 156.5 3.7e-35 >>gi|148704362|gb|EDL36309.1| mCG133735 [Mus musculus] (2466 aa) initn: 1580 init1: 1580 opt: 1580 Z-score: 1506.2 bits: 289.4 E(): 3.5e-75 Smith-Waterman score: 1580; 100.000% identity (100.000% similar) in 230 aa overlap (1-230:1-230) 10 20 30 40 50 60 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRREDHRAMFWIC 190 200 210 220 230 240 gi|148 LLCRLGFGRLQTFIGHTLSHGVKLSPAHHQGLLGSPAVLQEGHDGGMALLSFLEPKFLTR 250 260 270 280 290 300 >>gi|94397546|ref|XP_982057.1| PREDICTED: similar to ZFH (2562 aa) initn: 1530 init1: 1530 opt: 1530 Z-score: 1458.2 bits: 280.6 E(): 1.6e-72 Smith-Waterman score: 1530; 100.000% identity (100.000% similar) in 222 aa overlap (9-230:1-222) 10 20 30 40 50 60 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 MATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRREDHRAMFWIC 180 190 200 210 220 230 gi|943 LLCRLGFGRLQTFIGHTLSHGVKLSPAHHQGLLGSPAVLQEGHDGGMALLSFLEPKFLTR 240 250 260 270 280 290 >>gi|85677391|dbj|BAE78491.1| ZFH-5 [Mus musculus] g (2562 aa) initn: 1529 init1: 1529 opt: 1529 Z-score: 1457.3 bits: 280.4 E(): 1.8e-72 Smith-Waterman score: 1529; 99.550% identity (100.000% similar) in 222 aa overlap (9-230:1-222) 10 20 30 40 50 60 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS ::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|856 MATLNSASPSGTVPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR :::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRREDHRAMFWIC 180 190 200 210 220 230 gi|856 LLCRLGFGRLQTFIGHTLSHGVKLSPAHHQGLLGSPAVLQEGHDGGMALLSFLEPKFLTR 240 250 260 270 280 290 >>gi|149063945|gb|EDM14215.1| rCG23518 [Rattus norvegicu (2168 aa) initn: 1329 init1: 1329 opt: 1329 Z-score: 1267.5 bits: 245.0 E(): 6.8e-62 Smith-Waterman score: 1329; 86.937% identity (94.595% similar) in 222 aa overlap (9-230:1-222) 10 20 30 40 50 60 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS ::::.:.: :::::::::.: :: ::::::::::::::::::::::.::::: gi|149 MATLSSVSSSGTIPSPGHHVPSPSPETSSSSTSDPVTKDPPDAPSTAESIRS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG ::::::.:::: :: ::::::::..::::: ::::::::.:::. :::::::.::.:.:: gi|149 SEPGGEHLESGRDLAPPKEIGEPRHEPGCGPIPPKDLGVSKEEKGILPLDLSNHLLFSAG 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ ::::::::: : :::: :::::::::::.:::::::::.::::::::::::::::::.: gi|149 GQAYLLANLSLSGGSELLLPKGFPWDEASVKEEPSLPLLAHFPSSHLTTLHIQHGFDPVQ 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR :::::::.:::::::::::::: ::::::::::::::::::::::.:::: gi|149 GFSSSDQILSHDTSAPSLAACEGRDGSFWSYQLVPNPTEDPKDGPMGSRRGDHRAMFWIC 180 190 200 210 220 230 gi|149 LLCRLGFGRLQAFIGHTLSHGVKLTPAHHQGLLGSPAVLQEGHDGGMAFLSFLEPKLLTH 240 250 260 270 280 290 >>gi|149274619|ref|NP_001092273.1| zinc finger homeobox (2558 aa) initn: 1329 init1: 1329 opt: 1329 Z-score: 1266.5 bits: 245.1 E(): 7.7e-62 Smith-Waterman score: 1329; 86.937% identity (94.595% similar) in 222 aa overlap (9-230:1-222) 10 20 30 40 50 60 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSSTSDPVTKDPPDAPSTSESIRS ::::.:.: :::::::::.: :: ::::::::::::::::::::::.::::: gi|149 MATLSSVSSSGTIPSPGHHVPSPSPETSSSSTSDPVTKDPPDAPSTAESIRS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAKEEEEILPLDLSSHLFFAAG ::::::.:::: :: ::::::::..::::: ::::::::.:::. :::::::.::.:.:: gi|149 SEPGGEHLESGRDLAPPKEIGEPRHEPGCGPIPPKDLGVSKEEKGILPLDLSNHLLFSAG 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQ ::::::::: : :::: :::::::::::.:::::::::.::::::::::::::::::.: gi|149 GQAYLLANLSLSGGSELLLPKGFPWDEASVKEEPSLPLLAHFPSSHLTTLHIQHGFDPVQ 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 GFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR :::::::.:::::::::::::: ::::::::::::::::::::::.:::: gi|149 GFSSSDQILSHDTSAPSLAACEGRDGSFWSYQLVPNPTEDPKDGPMGSRRGDHRAMFWIC 180 190 200 210 220 230 gi|149 LLCRLGFGRLQAFIGHTLSHGVKLTPAHHQGLLGSPAVLQEGHDGGMAFLSFLEPKLLTH 240 250 260 270 280 290 >>gi|169207217|ref|XP_001715032.1| PREDICTED: similar to (2790 aa) initn: 1034 init1: 715 opt: 1128 Z-score: 1074.2 bits: 209.6 E(): 4e-51 Smith-Waterman score: 1128; 73.391% identity (84.549% similar) in 233 aa overlap (3-228:79-311) 10 20 30 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPP :.:::::::::::: .:: ::::::. : : gi|169 RDPRGGQGSEAAPCILLLIVGPARLPGAAPSTPPSTMATLNSASTTGTTPSPGHNAPSLP 50 60 70 80 90 100 40 50 60 70 80 90 mKIAA1 PETSSSST-SDPVTKDPPDAPSTSESIRSSEPGGERLESGSDLDPPKEIGEPQEEPGCGH .: :::: :: :::::: : ::::..:::::::. :::: : :::::::::: : ::: gi|169 SDTFSSSTPSDSVTKDPPAASSTSENMRSSEPGGQLLESGCGLVPPKEIGEPQEGPDCGH 110 120 130 140 150 160 100 110 120 130 140 mKIAA1 IPPKDLGVAK-----EEEEILP-LDLSSHLFFAAGGQAYLLANLPLPRGSELSLPKGFPW .::.: :: : :::: :: .:::.::::.:::.:::.:.: :: :::: ::::::: gi|169 FPPNDPGVEKDKEQEEEEEGLPPMDLSNHLFFTAGGEAYLVAKLSLPGGSELLLPKGFPW 170 180 190 200 210 220 150 160 170 180 190 200 mKIAA1 DEASAKEEPSLPLLTHFPSSHLTTLHIQHGFDPIQGFSSSDQMLSHDTSAPSLAACERRD ::. :::::::.:.. : ::::.::::::::::::::::::.::::::::: ::::.: gi|169 GEAGIKEEPSLPFLAYPPPSHLTALHIQHGFDPIQGFSSSDQILSHDTSAPSPAACEERH 230 240 250 260 270 280 210 220 230 mKIAA1 GSFWSYQLVPNPTEDPKDGPLGSRR :.::::::.::: ::::::.:. gi|169 GAFWSYQLAPNPPGDPKDGPMGNSGGNHVAVFWLCLLCRLGFSKPQAFMDHTQSHGVKLT 290 300 310 320 330 340 >>gi|12698145|dbj|BAB21899.1| hypothetical protein [Maca (329 aa) initn: 1031 init1: 700 opt: 1101 Z-score: 1061.6 bits: 204.2 E(): 2e-50 Smith-Waterman score: 1101; 73.128% identity (84.141% similar) in 227 aa overlap (9-228:1-227) 10 20 30 40 50 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSST-SDPVTKDPPDAPSTSESIR :::::::: .:: :::::: ::: .::::: ::::::::: ::::::..: gi|126 MATLNSASTTGTTPSPGHNGPSPPLDTSSSSIPSDPVTKDPPAAPSTSENMR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 SSEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAK-----EEEEILP-LDLSS :::::. :::: : :::::::::: : :::.::.: :: : :::: :: .:::. gi|126 YSEPGGQPLESGCGLIPPKEIGEPQEGPDCGHFPPNDPGVEKDKEQEEEEEGLPPMDLSN 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 HLFFAAGGQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQ ::::.:::.:::.:.: :: ::: ::::::: :.. :::::::.:.. : ::::.:::: gi|126 HLFFTAGGEAYLVAKLSLPGDSELLLPKGFPWGEVGIKEEPSLPFLAYPPPSHLTALHIQ 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 HGFDPIQGFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR ::::::::::::::.::::::::: ::::.: :.::::::.::: ::::::.:. gi|126 HGFDPIQGFSSSDQILSHDTSAPSPAACEERHGAFWSYQLAPNPPGDPKDGPMGNSGVNH 180 190 200 210 220 230 gi|126 VAVFWLCLLCRLGFSKPQAFMGHTQSHGVKLTPAQYQGLSDSPAVLQEGDEGCKALISFL 240 250 260 270 280 290 >>gi|124297719|gb|AAI31534.1| ZNF409 protein [Homo sapie (408 aa) initn: 1039 init1: 709 opt: 1102 Z-score: 1061.3 bits: 204.5 E(): 2.1e-50 Smith-Waterman score: 1102; 73.568% identity (84.581% similar) in 227 aa overlap (9-228:1-227) 10 20 30 40 50 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSST-SDPVTKDPPDAPSTSESIR :::::::: .:: ::::::. : : .: :::: ::::::::: : ::::..: gi|124 MATLNSASTTGTTPSPGHNAPSLPSDTFSSSTPSDPVTKDPPAASSTSENMR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 SSEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAK-----EEEEILP-LDLSS ::::::. :::: : :::::::::: : :::.::.: :: : :::: :: .:::. gi|124 SSEPGGQLLESGCGLVPPKEIGEPQEGPDCGHFPPNDPGVEKDKEQEEEEEGLPPMDLSN 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 HLFFAAGGQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQ ::::.:::.:::.:.: :: :::: ::::::: ::. :::::::.:.. : ::::.:::: gi|124 HLFFTAGGEAYLVAKLSLPGGSELLLPKGFPWGEAGIKEEPSLPFLAYPPPSHLTALHIQ 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 HGFDPIQGFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR ::::::::::::::.::::::::: ::::.: :.::::::.::: ::::::.:. gi|124 HGFDPIQGFSSSDQILSHDTSAPSPAACEERHGAFWSYQLAPNPPGDPKDGPMGNSGGNH 180 190 200 210 220 230 gi|124 VAVFWLCLLCRLGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFL 240 250 260 270 280 290 >>gi|119586548|gb|EAW66144.1| zinc finger homeobox 2, is (862 aa) initn: 1039 init1: 709 opt: 1102 Z-score: 1056.6 bits: 204.7 E(): 3.8e-50 Smith-Waterman score: 1102; 73.568% identity (84.581% similar) in 227 aa overlap (9-228:1-227) 10 20 30 40 50 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSST-SDPVTKDPPDAPSTSESIR :::::::: .:: ::::::. : : .: :::: ::::::::: : ::::..: gi|119 MATLNSASTTGTTPSPGHNAPSLPSDTFSSSTPSDPVTKDPPAASSTSENMR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 SSEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAK-----EEEEILP-LDLSS ::::::. :::: : :::::::::: : :::.::.: :: : :::: :: .:::. gi|119 SSEPGGQLLESGCGLVPPKEIGEPQEGPDCGHFPPNDPGVEKDKEQEEEEEGLPPMDLSN 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 HLFFAAGGQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQ ::::.:::.:::.:.: :: :::: ::::::: ::. :::::::.:.. : ::::.:::: gi|119 HLFFTAGGEAYLVAKLSLPGGSELLLPKGFPWGEAGIKEEPSLPFLAYPPPSHLTALHIQ 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 HGFDPIQGFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR ::::::::::::::.::::::::: ::::.: :.::::::.::: ::::::.:. gi|119 HGFDPIQGFSSSDQILSHDTSAPSPAACEERHGAFWSYQLAPNPPGDPKDGPMGNSGGNH 180 190 200 210 220 230 gi|119 VAVFWLCLLCRLGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFL 240 250 260 270 280 290 >>gi|119586546|gb|EAW66142.1| zinc finger homeobox 2, is (862 aa) initn: 1039 init1: 709 opt: 1102 Z-score: 1056.6 bits: 204.7 E(): 3.8e-50 Smith-Waterman score: 1102; 73.568% identity (84.581% similar) in 227 aa overlap (9-228:1-227) 10 20 30 40 50 mKIAA1 TLSSPPSTMATLNSASPSGTIPSPGHNVRSPPPETSSSST-SDPVTKDPPDAPSTSESIR :::::::: .:: ::::::. : : .: :::: ::::::::: : ::::..: gi|119 MATLNSASTTGTTPSPGHNAPSLPSDTFSSSTPSDPVTKDPPAASSTSENMR 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 SSEPGGERLESGSDLDPPKEIGEPQEEPGCGHIPPKDLGVAK-----EEEEILP-LDLSS ::::::. :::: : :::::::::: : :::.::.: :: : :::: :: .:::. gi|119 SSEPGGQLLESGCGLVPPKEIGEPQEGPDCGHFPPNDPGVEKDKEQEEEEEGLPPMDLSN 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 HLFFAAGGQAYLLANLPLPRGSELSLPKGFPWDEASAKEEPSLPLLTHFPSSHLTTLHIQ ::::.:::.:::.:.: :: :::: ::::::: ::. :::::::.:.. : ::::.:::: gi|119 HLFFTAGGEAYLVAKLSLPGGSELLLPKGFPWGEAGIKEEPSLPFLAYPPPSHLTALHIQ 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 HGFDPIQGFSSSDQMLSHDTSAPSLAACERRDGSFWSYQLVPNPTEDPKDGPLGSRR ::::::::::::::.::::::::: ::::.: :.::::::.::: ::::::.:. gi|119 HGFDPIQGFSSSDQILSHDTSAPSPAACEERHGAFWSYQLAPNPPGDPKDGPMGNSGGNH 180 190 200 210 220 230 gi|119 VAVFWLCLLCRLGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFL 240 250 260 270 280 290 230 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 11:06:14 2009 done: Thu Mar 12 11:11:19 2009 Total Scan time: 719.140 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]