# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg07380.fasta.nr -Q ../query/mKIAA1669.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1669, 304 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921256 sequences Expectation_n fit: rho(ln(x))= 4.8156+/-0.000183; mu= 11.5242+/- 0.010 mean_var=63.9505+/-12.672, 0's: 39 Z-trim: 39 B-trim: 1779 in 2/65 Lambda= 0.160381 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26342671|dbj|BAC34992.1| unnamed protein produc ( 656) 1653 391.0 3.1e-106 gi|148672429|gb|EDL04376.1| mCG6795 [Mus musculus] (1769) 1653 391.3 6.7e-106 gi|149017532|gb|EDL76536.1| tubulin, gamma complex (1763) 1573 372.8 2.5e-100 gi|119593913|gb|EAW73507.1| tubulin, gamma complex (1128) 1409 334.7 4.7e-89 gi|119593915|gb|EAW73509.1| tubulin, gamma complex (1437) 1409 334.8 5.6e-89 gi|153217293|gb|AAI51210.1| TUBGCP6 protein [Homo (1493) 1409 334.8 5.8e-89 gi|187956495|gb|AAI50614.1| TUBGCP6 protein [Homo (1811) 1409 334.9 6.7e-89 gi|119593914|gb|EAW73508.1| tubulin, gamma complex (1819) 1409 334.9 6.7e-89 gi|143811395|sp|Q96RT7.3|GCP6_HUMAN RecName: Full= (1819) 1409 334.9 6.7e-89 gi|56788364|ref|NP_065194.2| tubulin, gamma comple (1819) 1409 334.9 6.7e-89 gi|15076861|gb|AAK82968.1|AF272887_1 gamma-tubulin (1819) 1409 334.9 6.7e-89 gi|119593916|gb|EAW73510.1| tubulin, gamma complex (1825) 1409 334.9 6.7e-89 gi|194227001|ref|XP_001914922.1| PREDICTED: simila (1680) 1351 321.4 6.9e-85 gi|73968851|ref|XP_538314.2| PREDICTED: similar to (1683) 1184 282.8 3e-73 gi|119893431|ref|XP_876318.2| PREDICTED: similar t (1647) 1151 275.2 5.8e-71 gi|118117395|ref|XP_415987.2| PREDICTED: similar t (1879) 1098 262.9 3.2e-67 gi|126338981|ref|XP_001364246.1| PREDICTED: simila (1698) 1015 243.7 1.8e-61 gi|134025524|gb|AAI35718.1| Tubgcp6 protein [Xenop ( 306) 891 214.5 2e-53 gi|224093484|ref|XP_002189638.1| PREDICTED: simila (1603) 834 201.8 6.9e-49 gi|12056158|emb|CAC21238.1| gamma tubulin ring pro (1625) 698 170.3 2.1e-39 gi|189539611|ref|XP_001345623.2| PREDICTED: simila ( 303) 622 152.2 1.1e-34 gi|47224389|emb|CAG08639.1| unnamed protein produc (1238) 554 136.9 1.8e-29 gi|115752584|ref|XP_786939.2| PREDICTED: similar t (1926) 208 57.0 3.2e-05 >>gi|26342671|dbj|BAC34992.1| unnamed protein product [M (656 aa) initn: 1653 init1: 1653 opt: 1653 Z-score: 2063.6 bits: 391.0 E(): 3.1e-106 Smith-Waterman score: 1653; 100.000% identity (100.000% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL ::::::::::::::::::::::::::::::::::::: gi|263 MASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::::::::::::::::::::: gi|263 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMT 220 230 240 250 260 270 mKIAA1 SRQS gi|263 PDLDLWEAVLTYEASKRRCWERIGCPPGHREEPYLTEAGRDAFDRFCRLRHGELQALSGG 280 290 300 310 320 330 >>gi|148672429|gb|EDL04376.1| mCG6795 [Mus musculus] (1769 aa) initn: 1653 init1: 1653 opt: 1653 Z-score: 2057.6 bits: 391.3 E(): 6.7e-106 Smith-Waterman score: 1653; 100.000% identity (100.000% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL ::::::::::::::::::::::::::::::::::::: gi|148 MASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::::::::::::::::::::: gi|148 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMT 220 230 240 250 260 270 mKIAA1 SRQS gi|148 PDLDLWEAVLTYEASKRRCWERIGCPPGHREEPYLTEAGRDAFDRFCRLRHGELQALSGG 280 290 300 310 320 330 >>gi|149017532|gb|EDL76536.1| tubulin, gamma complex ass (1763 aa) initn: 1207 init1: 1207 opt: 1573 Z-score: 1957.6 bits: 372.8 E(): 2.5e-100 Smith-Waterman score: 1573; 95.968% identity (97.984% similar) in 248 aa overlap (24-271:1-247) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::::::::::::::.:: :: gi|149 MASITQLFDDLCEALLPAAQARPGQRSVNRKKAKLSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|149 KRVAYNALFANLFQEDTHQRQPDS-KLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE .:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TAPDCPFVEVGSVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::::.:::::::::. :::::::::::::::: :::::: ::::::::::::::::::: gi|149 MDVRSLISGEENLCHNMVQEALQVMEAAPGTGLTTVGLFSTGDSCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::::::::::::::::::::: gi|149 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMT 220 230 240 250 260 270 mKIAA1 SRQS gi|149 PDLDLWEAVLTYEASKRRCWERIGCPPGHREEPYLTEAGRDAFDRFCRLCHGELQALSGG 280 290 300 310 320 330 >>gi|119593913|gb|EAW73507.1| tubulin, gamma complex ass (1128 aa) initn: 1409 init1: 1409 opt: 1409 Z-score: 1755.2 bits: 334.7 E(): 4.7e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|119 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|119 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|119 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|119 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|119 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|119 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|119593915|gb|EAW73509.1| tubulin, gamma complex ass (1437 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1753.7 bits: 334.8 E(): 5.6e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|119 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|119 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|119 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|119 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|119 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|119 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|153217293|gb|AAI51210.1| TUBGCP6 protein [Homo sapi (1493 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1753.5 bits: 334.8 E(): 5.8e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|153 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|153 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|153 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|153 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|153 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|153 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|187956495|gb|AAI50614.1| TUBGCP6 protein [Homo sapi (1811 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1752.3 bits: 334.9 E(): 6.7e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|187 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|187 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|187 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|187 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|187 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|187 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|119593914|gb|EAW73508.1| tubulin, gamma complex ass (1819 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1752.3 bits: 334.9 E(): 6.7e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|119 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|119 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|119 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|119 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|119 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|119 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|143811395|sp|Q96RT7.3|GCP6_HUMAN RecName: Full=Gamm (1819 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1752.3 bits: 334.9 E(): 6.7e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|143 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|143 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|143 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|143 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|143 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|143 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 >>gi|56788364|ref|NP_065194.2| tubulin, gamma complex as (1819 aa) initn: 1434 init1: 1409 opt: 1409 Z-score: 1752.3 bits: 334.9 E(): 6.7e-89 Smith-Waterman score: 1409; 84.677% identity (95.161% similar) in 248 aa overlap (24-271:1-248) 10 20 30 40 50 60 mKIAA1 EHEVTPRCKVYQSGGSWAEKRVTMASITQLFDDLCEALLPAAQARPGQRSVNRKRAKRSL :::::::::::::::::::... :::::::::::::: gi|567 MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSL 10 20 30 70 80 90 100 110 120 mKIAA1 KRVAYNALFANLFQEDTHQRQPDSSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLE :.:::::::.::::..:.: ::: ::::..::.::::::::::::::.:::::::::.:: gi|567 KKVAYNALFTNLFQDETQQLQPDMSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAPDCPFVEVASVLDLLVQLAGSGPPQVLRRKRDYFFNNKHAGRNIPYSGYDCYDLSVFE ::: ::..::.:::::::::::::::::: ::::::.::::.:::.::::::: :::::: gi|567 AAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MDVRSFISGEENLCHHTVQEALQVMEAAPGTGLPTVGLFSIGDSCGDRFERDTRVSLFGA :::.:.:: :: ::: .::.:::::::::::::::::::.:: :::::::::::::::: gi|567 MDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGA 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 LVHSRTYDMDVRLDLPPVPDSADFSGLAIKVVFLSLSVTLEVWKILLPGTVGKLLSKPQV ::::::::::::: ::::::.::.::::::: gi|567 LVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVT 220 230 240 250 260 270 mKIAA1 SRQS gi|567 PDVDLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGG 280 290 300 310 320 330 304 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 08:34:29 2009 done: Sun Mar 15 08:40:17 2009 Total Scan time: 803.860 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]