# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg07127.fasta.nr -Q ../query/mKIAA1081.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1081, 403 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7905120 sequences Expectation_n fit: rho(ln(x))= 6.3388+/-0.000202; mu= 4.8687+/- 0.011 mean_var=135.0768+/-26.035, 0's: 28 Z-trim: 108 B-trim: 581 in 3/66 Lambda= 0.110353 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|13445784|gb|AAK26381.1|AF340028_1 Rab6-interact ( 976) 1758 291.6 5.2e-76 gi|51701367|sp|Q811U3.1|RB6I2_RAT RecName: Full=EL ( 948) 1754 290.9 8e-76 gi|23664282|gb|AAN39293.1| ERC1b [Rattus norvegicu ( 948) 1748 290.0 1.5e-75 gi|73997546|ref|XP_868106.1| PREDICTED: similar to ( 948) 1728 286.8 1.4e-74 gi|194377340|dbj|BAG57618.1| unnamed protein produ ( 724) 1720 285.4 2.8e-74 gi|6681583|dbj|BAA88763.1| ELKS [Homo sapiens] ( 948) 1720 285.5 3.4e-74 gi|149049596|gb|EDM02050.1| Rab6 interacting prote ( 944) 1713 284.4 7.3e-74 gi|149049597|gb|EDM02051.1| Rab6 interacting prote ( 972) 1713 284.4 7.5e-74 gi|119609343|gb|EAW88937.1| RAB6 interacting prote ( 944) 1682 279.5 2.2e-72 gi|119609341|gb|EAW88935.1| RAB6 interacting prote ( 972) 1682 279.5 2.3e-72 gi|73997548|ref|XP_868113.1| PREDICTED: similar to (1048) 1669 277.4 1e-71 gi|73997536|ref|XP_868087.1| PREDICTED: similar to (1076) 1669 277.5 1e-71 gi|224096394|ref|XP_002198029.1| PREDICTED: simila ( 949) 1661 276.1 2.3e-71 gi|73997530|ref|XP_868074.1| PREDICTED: similar to ( 956) 1656 275.3 4e-71 gi|73997544|ref|XP_868102.1| PREDICTED: similar to (1044) 1631 271.4 6.7e-70 gi|119609339|gb|EAW88933.1| RAB6 interacting prote (1044) 1623 270.1 1.6e-69 gi|224096390|ref|XP_002198035.1| PREDICTED: simila (1045) 1569 261.5 6.3e-67 gi|73997526|ref|XP_868065.1| PREDICTED: similar to (1012) 1516 253.1 2.1e-64 gi|73997532|ref|XP_868078.1| PREDICTED: similar to (1060) 1516 253.1 2.2e-64 gi|114587437|ref|XP_516542.2| PREDICTED: cytomatri ( 957) 1303 219.1 3.3e-54 gi|73985244|ref|XP_849232.1| PREDICTED: similar to ( 957) 1298 218.3 5.7e-54 gi|149728580|ref|XP_001490805.1| PREDICTED: ELKS/R ( 957) 1298 218.3 5.7e-54 gi|51701377|sp|O15083.3|ERC2_HUMAN RecName: Full=E ( 957) 1297 218.2 6.4e-54 gi|109038041|ref|XP_001101499.1| PREDICTED: simila ( 957) 1297 218.2 6.4e-54 gi|51701368|sp|Q8K3M6.1|ERC2_RAT RecName: Full=ERC ( 957) 1283 215.9 3e-53 gi|51701400|sp|Q6PH08.2|ERC2_MOUSE RecName: Full=E ( 957) 1282 215.8 3.4e-53 gi|119585719|gb|EAW65315.1| CAZ-associated structu ( 953) 1267 213.4 1.8e-52 gi|38231916|gb|AAR14796.1| CAST1/ERC2 splicing var ( 953) 1252 211.0 9.2e-52 gi|34783581|gb|AAH56760.1| ELKS/RAB6-interacting/C (1002) 1252 211.0 9.5e-52 gi|126336711|ref|XP_001365767.1| PREDICTED: simila (1120) 1250 210.8 1.3e-51 gi|38231912|gb|AAR14794.1| CAST1/ERC2 splicing var ( 960) 1228 207.2 1.3e-50 gi|23664280|gb|AAN39292.1| ERC2 [Rattus norvegicus ( 921) 1161 196.5 2.1e-47 gi|38231910|gb|AAR14793.1| CAST1/ERC2 splicing var ( 969) 1147 194.3 1e-46 gi|74180981|dbj|BAE27770.1| unnamed protein produc ( 977) 1147 194.3 1e-46 gi|73997538|ref|XP_868091.1| PREDICTED: similar to ( 992) 953 163.4 2e-37 gi|119609346|gb|EAW88940.1| RAB6 interacting prote ( 988) 952 163.3 2.2e-37 gi|21750735|dbj|BAC03827.1| unnamed protein produc ( 284) 943 161.3 2.5e-37 gi|27530918|dbj|BAC54108.1| ELKS gamma [Homo sapie ( 720) 948 162.5 2.8e-37 gi|27530916|dbj|BAC54107.1| ELKS beta [Homo sapien ( 992) 948 162.6 3.5e-37 gi|120300971|ref|NP_444434.2| Rab6-interacting pro (1120) 930 159.8 2.8e-36 gi|51827912|sp|Q99MI1.1|RB6I2_MOUSE RecName: Full= (1120) 930 159.8 2.8e-36 gi|73997528|ref|XP_868070.1| PREDICTED: similar to ( 820) 911 156.7 1.8e-35 gi|73997534|ref|XP_868082.1| PREDICTED: similar to (1120) 911 156.8 2.3e-35 gi|149049598|gb|EDM02052.1| Rab6 interacting prote (1088) 909 156.5 2.8e-35 gi|148667201|gb|EDK99617.1| Rab6 interacting prote (1088) 908 156.3 3.1e-35 gi|148667202|gb|EDK99618.1| Rab6 interacting prote (1116) 908 156.3 3.1e-35 gi|114642799|ref|XP_001151273.1| PREDICTED: RAB6-i ( 820) 903 155.4 4.4e-35 gi|114642791|ref|XP_001151532.1| PREDICTED: RAB6-i (1092) 903 155.5 5.4e-35 gi|119893166|ref|XP_597487.3| PREDICTED: similar t (1088) 898 154.7 9.3e-35 gi|73997542|ref|XP_868099.1| PREDICTED: similar to (1088) 898 154.7 9.3e-35 >>gi|13445784|gb|AAK26381.1|AF340028_1 Rab6-interacting (976 aa) initn: 1758 init1: 1758 opt: 1758 Z-score: 1520.9 bits: 291.6 E(): 5.2e-76 Smith-Waterman score: 1758; 100.000% identity (100.000% similar) in 286 aa overlap (1-286:691-976) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|134 VSLLQGDLSEKEASLLDIKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 670 680 690 700 710 720 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 730 740 750 760 770 780 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA 790 800 810 820 830 840 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 850 860 870 880 890 900 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT 910 920 930 940 950 960 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|134 NHKPSPDQDEEEGIWA 970 >>gi|51701367|sp|Q811U3.1|RB6I2_RAT RecName: Full=ELKS/R (948 aa) initn: 1754 init1: 1754 opt: 1754 Z-score: 1517.6 bits: 290.9 E(): 8e-76 Smith-Waterman score: 1754; 99.650% identity (100.000% similar) in 286 aa overlap (1-286:663-948) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|517 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|517 HEATLEARASPEMSDRIQQLEREIARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT 880 890 900 910 920 930 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|517 NHKPSPDQDEEEGIWA 940 >>gi|23664282|gb|AAN39293.1| ERC1b [Rattus norvegicus] (948 aa) initn: 1748 init1: 1748 opt: 1748 Z-score: 1512.4 bits: 290.0 E(): 1.5e-75 Smith-Waterman score: 1748; 99.301% identity (100.000% similar) in 286 aa overlap (1-286:663-948) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|236 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|236 HEATLEARASPEMSDRIQQLEREIARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|236 ELESLTSRQVKDQNKKVASLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|236 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|236 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT 880 890 900 910 920 930 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|236 NHKPSPDQDEEEGIWA 940 >>gi|73997546|ref|XP_868106.1| PREDICTED: similar to RAB (948 aa) initn: 1728 init1: 1728 opt: 1728 Z-score: 1495.2 bits: 286.8 E(): 1.4e-74 Smith-Waterman score: 1728; 97.902% identity (100.000% similar) in 286 aa overlap (1-286:663-948) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::.:::: gi|739 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESHLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA :::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::: gi|739 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQVEELLMA 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::: gi|739 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQT 880 890 900 910 920 930 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|739 NHKPSPDQDEEEGIWA 940 >>gi|194377340|dbj|BAG57618.1| unnamed protein product [ (724 aa) initn: 1720 init1: 1720 opt: 1720 Z-score: 1489.8 bits: 285.4 E(): 2.8e-74 Smith-Waterman score: 1720; 97.203% identity (100.000% similar) in 286 aa overlap (1-286:439-724) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|194 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 410 420 430 440 450 460 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::.::::::::::::::.:::::.::::::::::.:::::::::::::::::::::::: gi|194 HEAALEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA 470 480 490 500 510 520 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA :::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::: gi|194 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQVEELLMA 530 540 550 560 570 580 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 590 600 610 620 630 640 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::: gi|194 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQT 650 660 670 680 690 700 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|194 NHKPSPDQDEEEGIWA 710 720 >>gi|6681583|dbj|BAA88763.1| ELKS [Homo sapiens] gi| (948 aa) initn: 1720 init1: 1720 opt: 1720 Z-score: 1488.3 bits: 285.5 E(): 3.4e-74 Smith-Waterman score: 1720; 97.203% identity (100.000% similar) in 286 aa overlap (1-286:663-948) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|668 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::.::::::::::::::.:::::.::::::::::.:::::::::::::::::::::::: gi|668 HEAALEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA :::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::: gi|668 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQVEELLMA 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 820 830 840 850 860 870 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::: gi|668 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQT 880 890 900 910 920 930 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|668 NHKPSPDQDEEEGIWA 940 >>gi|149049596|gb|EDM02050.1| Rab6 interacting protein 2 (944 aa) initn: 1171 init1: 1171 opt: 1713 Z-score: 1482.3 bits: 284.4 E(): 7.3e-74 Smith-Waterman score: 1713; 97.902% identity (98.601% similar) in 286 aa overlap (1-286:663-944) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|149 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::::::::::::::::::::::..::::::::::::::::::::::::::::::::::: gi|149 HEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELE----RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA 760 770 780 790 800 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 810 820 830 840 850 860 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT 870 880 890 900 910 920 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|149 NHKPSPDQDEEEGIWA 930 940 >>gi|149049597|gb|EDM02051.1| Rab6 interacting protein 2 (972 aa) initn: 1171 init1: 1171 opt: 1713 Z-score: 1482.2 bits: 284.4 E(): 7.5e-74 Smith-Waterman score: 1713; 97.902% identity (98.601% similar) in 286 aa overlap (1-286:691-972) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|149 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 670 680 690 700 710 720 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::::::::::::::::::::::..::::::::::::::::::::::::::::::::::: gi|149 HEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 730 740 750 760 770 780 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELE----RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA 790 800 810 820 830 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 840 850 860 870 880 890 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT 900 910 920 930 940 950 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|149 NHKPSPDQDEEEGIWA 960 970 >>gi|119609343|gb|EAW88937.1| RAB6 interacting protein 2 (944 aa) initn: 1152 init1: 1152 opt: 1682 Z-score: 1455.7 bits: 279.5 E(): 2.2e-72 Smith-Waterman score: 1682; 95.804% identity (98.601% similar) in 286 aa overlap (1-286:663-944) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|119 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::.::::::::::::::.:::::.::::::::::.:::::::::::::::::::::::: gi|119 HEAALEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA ::: ::::::::::::::::::::::::::::::::::::.:.:::::::::::::: gi|119 ELE----RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQVEELLMA 760 770 780 790 800 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 810 820 830 840 850 860 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::: gi|119 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQT 870 880 890 900 910 920 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|119 NHKPSPDQDEEEGIWA 930 940 >>gi|119609341|gb|EAW88935.1| RAB6 interacting protein 2 (972 aa) initn: 1192 init1: 1152 opt: 1682 Z-score: 1455.5 bits: 279.5 E(): 2.3e-72 Smith-Waterman score: 1682; 95.804% identity (98.601% similar) in 286 aa overlap (1-286:691-972) 10 20 30 mKIAA1 KKDSRLKTLEIALEQKKEECLKMESQLKKA :::::::::::::::::::::::::::::: gi|119 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA 670 680 690 700 710 720 40 50 60 70 80 90 mKIAA1 HEATLEARASPEMSDRIQQLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA :::.::::::::::::::.:::::.::::::::::.:::::::::::::::::::::::: gi|119 HEAALEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA 730 740 750 760 770 780 100 110 120 130 140 150 mKIAA1 ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQVEELLMA ::: ::::::::::::::::::::::::::::::::::::.:.:::::::::::::: gi|119 ELE----RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQVEELLMA 790 800 810 820 830 160 170 180 190 200 210 mKIAA1 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 840 850 860 870 880 890 220 230 240 250 260 270 mKIAA1 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::: gi|119 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQT 900 910 920 930 940 950 280 290 300 310 320 330 mKIAA1 NHKPSPDQDEEEGIWALSSAILFRTIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILR :::::::::::::::: gi|119 NHKPSPDQDEEEGIWA 960 970 403 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:18:12 2009 done: Thu Mar 12 14:24:35 2009 Total Scan time: 871.290 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]