FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0444.ptfa, 702 aa vs ./tmplib.26680 library 1768315 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9536+/-0.00626; mu= 2.3124+/- 0.416 mean_var=206.1338+/-48.853, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.0893 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4075 ( 1945 res) mbg09037 (1945) 1387 192 5e-49 >>mKIAA4075 ( 1945 res) mbg09037 (1945 aa) initn: 2450 init1: 1290 opt: 1387 Z-score: 972.5 bits: 191.9 E(): 5e-49 Smith-Waterman score: 3013; 67.486% identity (69.806% ungapped) in 692 aa overlap (2-673:1257-1945) 10 20 30 mKIAA0 PGDNKDVEDSSVIHYDDAAISKLLDRNQDAT ::::. :::::::::: :: .::::::: : mKIAA4 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1230 1240 1250 1260 1270 1280 40 50 60 70 80 mKIAA0 DDTELQNMNEYLSSFKVAQYVVREED-GVEE-VEREVIKQEENVDPDYWEKLLRHHYEQQ .:::::.::::::::::::::::::. : :: ::::.:::::.::::::::::::::::: mKIAA4 EDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQ 1290 1300 1310 1320 1330 1340 90 100 110 120 130 140 mKIAA0 QEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQS ::::::::::::::::::::::.::::..:::. :::::.::..::. ::::.:: :. mKIAA4 QEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAP- 1350 1360 1370 1380 1390 1400 150 160 170 180 190 200 mKIAA0 GRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHW :: ::. :..:.::::::::::::::::::::::::::::::::::.::::::::...: mKIAA4 -RRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQW 1410 1420 1430 1440 1450 1460 210 220 230 240 250 260 mKIAA0 LVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVR :::::::::::::.::::::::::::::::::::::::::::::::::::::::::::.: mKIAA4 LVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1470 1480 1490 1500 1510 1520 270 280 290 300 310 320 mKIAA0 KKVQEFEHVNGKYSTPDLVPEGAEGKKPGEVISSDPNTPVPASP--------AQLPPAPL :::::::::::..: :.:. : :.:: .. : .:.::.:..: : .::: mKIAA4 KKVQEFEHVNGRWSMPELA-EVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAED 1530 1540 1550 1560 1570 1580 330 340 350 360 370 mKIAA0 GLT---DKMEAQLGYTDEKESGMQKPKKSLEIQTLPTALDRVEGEDKHQSSDSKDRAREE :. .... . . ::: . :. ..: ::. .. :.: : mKIAA4 GIKIEENSLKEEESTEGEKEVKSSAPEATVECAQLPAPATAPATAPATATAPEDDKAPAE 1590 1600 1610 1620 1630 1640 380 390 400 410 420 430 mKIAA0 RT---EEVEKAQGSP--EQPLKEEV--LPDKEPIPDKPELSLGHSGDFRPDDPKTEEKEP :.::::. . :.:.. :. . : . .: ..: .. : ::.. mKIAA4 PPEGEEKVEKAEVKERTEEPMETEAKGTTEVEKVEEKSAVDLTPIVVEDKEEKKEEEEKK 1650 1660 1670 1680 1690 1700 440 450 460 470 480 490 mKIAA0 GETQQNGDREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWH :::. .: .:. ::.: .::::::::::::::.:::::::::. . : ::::: mKIAA4 DVMLQNGETPKDLSDEKQKKNSKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWH 1710 1720 1730 1740 1750 1760 500 510 520 530 540 550 mKIAA0 RRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLE :::::::::::..::::::::::::::: :::::::.:...::.::.::::::::::::: mKIAA4 RRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLE 1770 1780 1790 1800 1810 1820 560 570 580 590 600 610 mKIAA0 QALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL :::::::::::::::::..::.::.::::.:.:::::::::::::::::.:::::::::: mKIAA4 QALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVL 1830 1840 1850 1860 1870 1880 620 630 640 650 660 670 mKIAA0 HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQTSS ::::.:::::::::::::::::. ..::::::.:::::::.:::::.::: .: ::... mKIAA4 HKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPPPQQVAQ 1890 1900 1910 1920 1930 1940 680 690 700 mKIAA0 RRRDFPLFQRSFPAEPSHLPNPRGREKLQPF .. mKIAA4 QQ 702 residues in 1 query sequences 1768315 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:20:54 2006 done: Mon Mar 27 10:20:55 2006 Scan time: 0.850 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]