# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg06816.fasta.nr -Q ../query/mKIAA0365.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0365, 370 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916746 sequences Expectation_n fit: rho(ln(x))= 5.6868+/-0.000191; mu= 8.5657+/- 0.011 mean_var=102.3284+/-19.447, 0's: 24 Z-trim: 33 B-trim: 2 in 1/64 Lambda= 0.126787 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26335035|dbj|BAC31218.1| unnamed protein produc (1067) 2370 444.1 6.4e-122 gi|25992249|gb|AAN77118.1| arginine/serine-rich 14 (1067) 2370 444.1 6.4e-122 gi|61216800|sp|Q8CH09.2|SFR14_MOUSE RecName: Full= (1067) 2370 444.1 6.4e-122 gi|148696857|gb|EDL28804.1| splicing factor, argin (1091) 2370 444.1 6.5e-122 gi|27769382|gb|AAH42763.1| Sfrs14 protein [Mus mus ( 663) 2362 442.5 1.2e-121 gi|149036000|gb|EDL90666.1| splicing factor, argin (1068) 2269 425.6 2.3e-116 gi|34785711|gb|AAH57305.1| Sfrs14 protein [Mus mus ( 703) 1787 337.3 6e-90 gi|73985904|ref|XP_865142.1| PREDICTED: similar to ( 685) 1699 321.2 4.1e-85 gi|119605173|gb|EAW84767.1| splicing factor, argin ( 781) 1699 321.3 4.5e-85 gi|119605175|gb|EAW84769.1| splicing factor, argin (1046) 1699 321.4 5.6e-85 gi|119605176|gb|EAW84770.1| splicing factor, argin (1098) 1699 321.4 5.8e-85 gi|114676224|ref|XP_001138422.1| PREDICTED: splici ( 997) 1698 321.2 6.1e-85 gi|114676222|ref|XP_001138864.1| PREDICTED: splici (1063) 1698 321.2 6.4e-85 gi|114676220|ref|XP_001138591.1| PREDICTED: splici (1091) 1698 321.2 6.5e-85 gi|114676218|ref|XP_524161.2| PREDICTED: splicing (1105) 1698 321.2 6.6e-85 gi|119605178|gb|EAW84772.1| splicing factor, argin ( 841) 1694 320.4 8.9e-85 gi|18089035|gb|AAH20586.1| SFRS14 protein [Homo sa ( 988) 1694 320.4 1e-84 gi|57997135|emb|CAI46117.1| hypothetical protein [ (1030) 1694 320.4 1e-84 gi|119605177|gb|EAW84771.1| splicing factor, argin (1030) 1694 320.4 1e-84 gi|119605179|gb|EAW84773.1| splicing factor, argin (1040) 1694 320.5 1e-84 gi|61216804|sp|Q8IX01.1|SFR14_HUMAN RecName: Full= (1082) 1694 320.5 1.1e-84 gi|168272970|dbj|BAG10324.1| splicing factor, argi (1082) 1694 320.5 1.1e-84 gi|158255986|dbj|BAF83964.1| unnamed protein produ (1082) 1691 319.9 1.6e-84 gi|194389510|dbj|BAG61716.1| unnamed protein produ ( 861) 1684 318.5 3.2e-84 gi|149757378|ref|XP_001503468.1| PREDICTED: splici (1090) 1666 315.3 3.8e-83 gi|73985908|ref|XP_865183.1| PREDICTED: similar to (1027) 1645 311.5 5.2e-82 gi|73985906|ref|XP_852169.1| PREDICTED: similar to (1095) 1645 311.5 5.4e-82 gi|109123990|ref|XP_001114911.1| PREDICTED: simila (1084) 1593 302.0 3.9e-79 gi|67968031|dbj|BAE00497.1| unnamed protein produc ( 711) 1469 279.1 1.9e-72 gi|126323571|ref|XP_001370673.1| PREDICTED: simila (1100) 1287 246.0 2.8e-62 gi|149639054|ref|XP_001515098.1| PREDICTED: simila (1094) 1223 234.3 9.3e-59 gi|23271099|gb|AAH23276.1| Sfrs14 protein [Mus mus ( 470) 1132 217.3 5.2e-54 gi|118103262|ref|XP_418231.2| PREDICTED: hypotheti (1058) 964 186.9 1.7e-44 gi|224087991|ref|XP_002196099.1| PREDICTED: homer (1263) 962 186.6 2.4e-44 gi|194668643|ref|XP_884815.3| PREDICTED: similar t ( 686) 882 171.8 4e-40 gi|74002293|ref|XP_852520.1| PREDICTED: similar to ( 378) 713 140.6 5.2e-31 gi|66912078|gb|AAH97819.1| MGC115540 protein [Xeno ( 961) 585 117.6 1.1e-23 gi|159163540|pdb|1X4P|A Chain A, Solution Structur ( 66) 283 61.2 7.1e-08 gi|148696856|gb|EDL28803.1| splicing factor, argin ( 108) 205 47.2 0.002 >>gi|26335035|dbj|BAC31218.1| unnamed protein product [M (1067 aa) initn: 2368 init1: 1372 opt: 2370 Z-score: 2345.2 bits: 444.1 E(): 6.4e-122 Smith-Waterman score: 2370; 98.889% identity (99.722% similar) in 360 aa overlap (1-359:403-762) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP :::::::::::::::::::::::::::::: gi|263 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIMRLQDRLLKGVTP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::::.:::::::::::::::::::::::::.::::::: gi|263 LLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW 500 510 520 530 540 550 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASSTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|263 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPR 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS 680 690 700 710 720 730 330 340 350 360 370 mKIAA0 SPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP :::::::::::::::::::::::::::::: gi|263 SPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMETAEKLARFVAQVGPEIEQFSIEN 740 750 760 770 780 790 >>gi|25992249|gb|AAN77118.1| arginine/serine-rich 14 spl (1067 aa) initn: 2368 init1: 1372 opt: 2370 Z-score: 2345.2 bits: 444.1 E(): 6.4e-122 Smith-Waterman score: 2370; 98.889% identity (99.722% similar) in 360 aa overlap (1-359:403-762) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP :::::::::::::::::::::::::::::: gi|259 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIMRLQDRLLKGVTP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::::.:::::::::::::::::::::::::.::::::: gi|259 LLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW 500 510 520 530 540 550 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 ASSTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|259 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPR 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS 680 690 700 710 720 730 330 340 350 360 370 mKIAA0 SPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP :::::::::::::::::::::::::::::: gi|259 SPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMETAEKLARFVAQVGPEIEQFSIEN 740 750 760 770 780 790 >>gi|61216800|sp|Q8CH09.2|SFR14_MOUSE RecName: Full=Puta (1067 aa) initn: 2368 init1: 1372 opt: 2370 Z-score: 2345.2 bits: 444.1 E(): 6.4e-122 Smith-Waterman score: 2370; 98.889% identity (99.722% similar) in 360 aa overlap (1-359:403-762) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP :::::::::::::::::::::::::::::: gi|612 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIMRLQDRLLKGVTP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::::.:::::::::::::::::::::::::.::::::: gi|612 LLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW 500 510 520 530 540 550 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 ASSTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|612 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPR 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS 680 690 700 710 720 730 330 340 350 360 370 mKIAA0 SPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP :::::::::::::::::::::::::::::: gi|612 SPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMETAEKLARFVAQVGPEIEQFSIEN 740 750 760 770 780 790 >>gi|148696857|gb|EDL28804.1| splicing factor, arginine/ (1091 aa) initn: 2368 init1: 1372 opt: 2370 Z-score: 2345.1 bits: 444.1 E(): 6.5e-122 Smith-Waterman score: 2370; 98.889% identity (99.722% similar) in 360 aa overlap (1-359:427-786) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP :::::::::::::::::::::::::::::: gi|148 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIMRLQDRLLKGVTP 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::::.:::::::::::::::::::::::::.::::::: gi|148 LLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 460 470 480 490 500 510 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW 520 530 540 550 560 570 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ASSTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 580 590 600 610 620 630 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|148 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPR 640 650 660 670 680 690 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS 700 710 720 730 740 750 330 340 350 360 370 mKIAA0 SPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP :::::::::::::::::::::::::::::: gi|148 SPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMETAEKLARFVAQVGPEIEQFSIEN 760 770 780 790 800 810 >>gi|27769382|gb|AAH42763.1| Sfrs14 protein [Mus musculu (663 aa) initn: 2360 init1: 1375 opt: 2362 Z-score: 2340.0 bits: 442.5 E(): 1.2e-121 Smith-Waterman score: 2362; 99.162% identity (99.721% similar) in 358 aa overlap (3-359:1-358) 10 20 30 40 50 60 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTPLLMACNAYELSVKMKTLTSPLDLAMAMETT ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|277 KNCFFEIIKPFDKSIMRLQDRLLKGVTPLLMACNAYELSVKMKTLTSPLDLAMALETT 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 NSLCRKSLALLGQTFSLASSFRKEKILEAVGLQDIAPSPAYFPNFEDSTLFGREYIDHLK ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|277 NSLCRKSLALLGQTFSLASSFRQEKILEAVGLQDIAPSPAYFPNFEDSTLFGREYIDHLK 60 70 80 90 100 110 130 140 150 160 170 mKIAA0 AWLMASGYPLQLKRAVPPESREQKTTAQTWASSTLSQ-VPQRADHRVVDTIDQLVMRVIQ ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|277 AWLMASGYPLQLKRAVPPESREQKTTAQTWASSTLSQAVPQRADHRVVDTIDQLVMRVIQ 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 GRLSPRERTLLLQDPAYWFLSDESSLEYKYYKLKLAESQRLNHSWPIVERRPTPAQCAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 GRLSPRERTLLLQDPAYWFLSDESSLEYKYYKLKLAESQRLNHSWPIVERRPTPAQCAVR 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 AMLYAQAVRSLKRRLLPWQRRRLLRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 AMLYAQAVRSLKRRLLPWQRRRLLRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQASG 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 SLRVKPPPRDSSDAAQDCLSEPAKPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 SLRVKPPPRDSSDAAQDCLSEPAKPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSAN 300 310 320 330 340 350 360 370 mKIAA0 SRCPPLPHPVP gi|277 MDAKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQSSSAFKFYREKVLELCP 360 370 380 390 400 410 >>gi|149036000|gb|EDL90666.1| splicing factor, arginine/ (1068 aa) initn: 1309 init1: 1309 opt: 2269 Z-score: 2245.4 bits: 425.6 E(): 2.3e-116 Smith-Waterman score: 2269; 94.722% identity (97.500% similar) in 360 aa overlap (1-359:403-762) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP ::::::::::::::: :::::::::::::: gi|149 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::.:.:::::::.:::::::::::::::::.::::::: gi|149 LLMACNAYELSVKMKTLTSPLDLAVALETTNSLCKKSLALLGQTFSLASSFRQEKILEAV 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::.::::::: :::::::::: gi|149 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQVKRAVPPEPREQKTTAQTW 500 510 520 530 540 550 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY :.::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AASTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS ::: :::::::: ::::::: :::::::::::::::::::::::::::: :::::: ::: gi|149 GLKPKKATTAQQISLSSGTRLKHHGRQASGSLRVKPPPRDSSDAAQDCLPEPAKPCAQPS 680 690 700 710 720 730 330 340 350 360 370 mKIAA0 SPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP :::::::::.:...:::::::::::: ::: gi|149 SPGALGPSPQPAAGDDSEALPASSRCSSANMDAKTMETAEKLARFVAQVGPEIEQFSIEN 740 750 760 770 780 790 >>gi|34785711|gb|AAH57305.1| Sfrs14 protein [Mus musculu (703 aa) initn: 1839 init1: 1010 opt: 1787 Z-score: 1771.2 bits: 337.3 E(): 6e-90 Smith-Waterman score: 1787; 98.551% identity (99.638% similar) in 276 aa overlap (1-275:403-678) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP :::::::::::::::::::::::::::::: gi|347 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIMRLQDRLLKGVTP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV ::::::::::::::::::::::::::.:::::::::::::::::::::::::.::::::: gi|347 LLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTW 500 510 520 530 540 550 160 170 180 190 200 mKIAA0 ASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 ASSTLSQAVPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKY 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA0 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|347 YKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPR 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA0 GLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPS :::::: gi|347 GLKAKKPPLPSRHPCPQALGRNTMAARLLAP 680 690 700 >>gi|73985904|ref|XP_865142.1| PREDICTED: similar to spl (685 aa) initn: 1657 init1: 857 opt: 1699 Z-score: 1684.4 bits: 321.2 E(): 4.1e-85 Smith-Waterman score: 1699; 72.222% identity (86.944% similar) in 360 aa overlap (1-359:9-368) 10 20 30 40 50 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTPLLMACNAYELSVKMKTLTSPLD ::::::::::::::: ::::::::::.::::::::::::::::::::..::: gi|739 MLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLD 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 LAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAVGLQDIAPSPAYFPNFEDSTLFG ::.:.:::::::::::::::::::::::::.::::::::::::::::: ::::::::::: gi|739 LAVALETTNSLCRKSLALLGQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFG 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 REYIDHLKAWLMASGYPLQLKRAVP-PESREQKTTAQTWASSTLSQVPQRADHRVVDTID :::::::::::..:: :::.:.: : : . :.: :.: : .:: :.:::::::.:::::: gi|739 REYIDHLKAWLVTSGCPLQVKKAEPEPTQDEEKLTSQLWEGSTKSSVPQRADHKVVDTID 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 QLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKYYKLKLAESQRLNHSWPIVERRP ::: :.. : :::.::.:: .:::::::::.:::::::::::::: ::..:. : ....: gi|739 QLVTRIVGGSLSPKERALLKEDPAYWFLSDDSSLEYKYYKLKLAEMQRVSHTLPGADQKP 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 TPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLLRSQGPRGLKAKKATTAQQTSLSSGTRQK : :.:::::::::...::::.:::: .:: :::.:: :: :..::::. :: :::::: : gi|739 TAAECAVRAMLYARTIRSLKKRLLPGRRRGLLRTQGLRGWKVRKATTGTQTLLSSGTRLK 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 HHGRQASGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPSSPGALGPSPRPTGADDSEALPA :::::: :::. : :..:...:: .:. : :: . : ::.:.::. ::: . gi|739 HHGRQAPGSLQRKLSQPDGNDTVKDCPPDPVGPSLGDPSPEVSGLSPKPAGAEVSEAPQS 310 320 330 340 350 360 360 370 mKIAA0 SSRCPSANSRCPPLPHPVP :: ::::. gi|739 SSPCPSADVDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYR 370 380 390 400 410 420 >>gi|119605173|gb|EAW84767.1| splicing factor, arginine/ (781 aa) initn: 1729 init1: 890 opt: 1699 Z-score: 1683.6 bits: 321.3 E(): 4.5e-85 Smith-Waterman score: 1699; 72.283% identity (85.054% similar) in 368 aa overlap (1-360:413-780) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP ::::::::::::::: ::::::::::.::: gi|119 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKSVTP 390 400 410 420 430 440 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV :::::::::::::::::..:::::.:.:::::::::::::::::::::::::.::::::: gi|119 LLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 450 460 470 480 490 500 100 110 120 130 140 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQ------- :::::::::: ::::::::::::::::::::::..:: :::.:.: : ::. gi|119 GLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGCPLQVKKAEPEPMREEEKMIPPT 510 520 530 540 550 560 150 160 170 180 190 200 mKIAA0 KTTAQTWASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDE : :. : :.::. :::::::::: :::::: :::.: :::.::::: .:::::::::: gi|119 KPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEGSLSPKERTLLKEDPAYWFLSDE 570 580 590 600 610 620 210 220 230 240 250 260 mKIAA0 SSLEYKYYKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRL .::::::::::::: ::.... ....:: :.::::::::..:::.::..::::::: : gi|119 NSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRAMLYSRAVRNLKKKLLPWQRRGL 630 640 650 660 670 680 270 280 290 300 310 320 mKIAA0 LRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPA ::.:: :: ::..:::. :: :::::: ::::::: : ..:: : .:::.:: .:. gi|119 LRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPV 690 700 710 720 730 740 330 340 350 360 370 mKIAA0 KPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP : :: : : ::::.:.:.: ::: .:: ::::.: gi|119 GPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADSG 750 760 770 780 >>gi|119605175|gb|EAW84769.1| splicing factor, arginine/ (1046 aa) initn: 1729 init1: 890 opt: 1699 Z-score: 1682.0 bits: 321.4 E(): 5.6e-85 Smith-Waterman score: 1699; 72.283% identity (85.054% similar) in 368 aa overlap (1-360:413-780) 10 20 30 mKIAA0 KTKNCFFEIIKPFDKSIMRLQDRLLKGVTP ::::::::::::::: ::::::::::.::: gi|119 FTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKSVTP 390 400 410 420 430 440 40 50 60 70 80 90 mKIAA0 LLMACNAYELSVKMKTLTSPLDLAMAMETTNSLCRKSLALLGQTFSLASSFRKEKILEAV :::::::::::::::::..:::::.:.:::::::::::::::::::::::::.::::::: gi|119 LLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSLALLGQTFSLASSFRQEKILEAV 450 460 470 480 490 500 100 110 120 130 140 mKIAA0 GLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQ------- :::::::::: ::::::::::::::::::::::..:: :::.:.: : ::. gi|119 GLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGCPLQVKKAEPEPMREEEKMIPPT 510 520 530 540 550 560 150 160 170 180 190 200 mKIAA0 KTTAQTWASSTLSQ-VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDE : :. : :.::. :::::::::: :::::: :::.: :::.::::: .:::::::::: gi|119 KPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEGSLSPKERTLLKEDPAYWFLSDE 570 580 590 600 610 620 210 220 230 240 250 260 mKIAA0 SSLEYKYYKLKLAESQRLNHSWPIVERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRL .::::::::::::: ::.... ....:: :.::::::::..:::.::..::::::: : gi|119 NSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRAMLYSRAVRNLKKKLLPWQRRGL 630 640 650 660 670 680 270 280 290 300 310 320 mKIAA0 LRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQASGSLRVKPPPRDSSDAAQDCLSEPA ::.:: :: ::..:::. :: :::::: ::::::: : ..:: : .:::.:: .:. gi|119 LRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPV 690 700 710 720 730 740 330 340 350 360 370 mKIAA0 KPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSANSRCPPLPHPVP : :: : : ::::.:.:.: ::: .:: ::::.: gi|119 GPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSADSALCFVVDMKTMETAEKLARFVA 750 760 770 780 790 800 gi|119 QVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFELCPSICFTSSPHNLHTGGGD 810 820 830 840 850 860 370 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 07:56:48 2009 done: Sat Mar 14 08:02:57 2009 Total Scan time: 843.240 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]