FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4102.ptfa, 1138 aa vs ./tmplib.26680 library 1767879 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.5226+/-0.00488; mu= 17.2424+/- 0.323 mean_var=148.0512+/-36.285, 0's: 0 Z-trim: 11 B-trim: 159 in 1/35 Lambda= 0.1054 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0706 ( 1120 res) mfj19350 (1120) 1500 241 9.6e-64 mKIAA0591 ( 1162 res) mpm05364 (1162) 1255 203 1.6e-52 mKIAA4058 ( 832 res) mic12051 ( 832) 277 55 7.8e-08 mKIAA0359 ( 757 res) mbg06791 ( 757) 263 52 3.2e-07 mKIAA1590 ( 590 res) mph00219 ( 590) 211 44 6.7e-05 >>mKIAA0706 ( 1120 res) mfj19350 (1120 aa) initn: 870 init1: 712 opt: 1500 Z-score: 1236.7 bits: 240.7 E(): 9.6e-64 Smith-Waterman score: 1500; 69.855% identity (73.252% ungapped) in 345 aa overlap (1-336:311-648) 10 20 30 mKIAA4 SVLTWLLRENLGGNSRTAMVAALSPADINY :::::::.:::::::::::.:::::::::: mKIAA0 KSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINY 290 300 310 320 330 340 40 50 60 70 80 mKIAA4 DETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLLYAQG-----LGDITD .:::::::::::.:::::::.:::::: .:::::..::.::::::.::: :: . mKIAA0 EETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRDLLMAQGLSASALGGLKV 350 360 370 380 390 400 90 100 110 120 130 140 mKIAA4 TNTVPGG--PKLTNALVGMSPSSSLSALSSRAASVSSLHERILFAPGSEEAIERLKETEK . ::: : .. . :::: . : : : . : :::.:::.:::: mKIAA0 EEGSPGGVLPPASSPPAPASPSSPPPHNGELEPSFSPSAEPQI---GPEEAMERLQETEK 410 420 430 440 450 150 160 170 180 190 200 mKIAA4 IIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPL ::::::::::::::.:::.::::::::::::::.::::::.::::::::::::::::::: mKIAA0 IIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPL 460 470 480 490 500 510 210 220 230 240 250 260 mKIAA4 MSECLLYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVTLEPCEG :::::::.:::::::::. :. :: :.:.::.:.::.::: . ::..:::::::: mKIAA0 MSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEG 520 530 540 550 560 570 270 280 290 300 310 320 mKIAA4 ADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERER--TPCAETPAEPVDWA :.:::::: ::: .:.:::::.:::.:::::::::::: :::: : :.::::: mKIAA0 AETYVNGKLVTELLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWN 580 590 600 610 620 630 330 340 350 360 370 380 mKIAA4 FAQRELLEKQGIDMKQAISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSESCPVVGMS :::.::::.::::.: mKIAA0 FAQKELLEQQGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQRLVRDTWGPTEPGQYAD 640 650 660 670 680 690 >>mKIAA0591 ( 1162 res) mpm05364 (1162 aa) initn: 1769 init1: 1249 opt: 1255 Z-score: 1035.2 bits: 203.5 E(): 1.6e-52 Smith-Waterman score: 1730; 79.472% identity (82.622% ungapped) in 341 aa overlap (1-339:315-644) 10 20 30 mKIAA4 SVLTWLLRENLGGNSRTAMVAALSPADINY :::::::::::::::::::::::::::::: mKIAA0 KSLTTLGKVISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINY 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA4 DETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLLYAQGLGDITDTNTVP ::::::::::::::::.:::.:::::: ::.::::.:::::.::: ::::::: ::. mKIAA0 DETLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSM-- 350 360 370 380 390 400 100 110 120 130 140 mKIAA4 GGPKLTNALVGMSPSSSLSALSSRAA--SVSSLHERILFAPGSEEAIERLKETEKIIAEL :. ::. :::: .:.:... ::.:..:::. .::.:::::::::.::::::: mKIAA0 GS--LTS-----SPSSC--SLNSQVGLTSVTSIQERIMSTPGGEEAIERLKESEKIIAEL 410 420 430 440 450 150 160 170 180 190 200 mKIAA4 NETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECL :::::::::.::::::::::::::::::.::::::::::::::::::::::::::::::: mKIAA0 NETWEEKLRKTEAIRMEREALLAEMGVAIREDGGTLGVFSPKKTPHLVNLNEDPLMSECL 460 470 480 490 500 510 210 220 230 240 250 260 mKIAA4 LYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVTLEPCEGADTYV :::::::.::::. :::::::::::: ::::::.:::. . ::..::::::: ..::: mKIAA0 LYYIKDGITRVGQADAERRQDIVLSGAHIKEEHCLFRSERSNTGEVIVTLEPCERSETYV 520 530 540 550 560 570 270 280 290 300 310 320 mKIAA4 NGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQRELL :::.:..: :::::::::::.:::::::::::: :::.:: ::::.:::::.::::::: mKIAA0 NGKRVAHPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELL 580 590 600 610 620 630 330 340 350 360 370 380 mKIAA4 EKQGIDMKQAISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSESCPVVGMSRSGTSQE ::::::::: . mKIAA0 EKQGIDMKQEMEKRLQEMEILYKKEKEEADLLLEQQRLDADSDSGDDSDKRSCEESWKLI 640 650 660 670 680 690 >>mKIAA4058 ( 832 res) mic12051 (832 aa) initn: 306 init1: 271 opt: 277 Z-score: 233.0 bits: 54.5 E(): 7.8e-08 Smith-Waterman score: 277; 33.696% identity (35.227% ungapped) in 184 aa overlap (1-180:358-537) 10 20 30 mKIAA4 SVLTWLLRENLGGNSRTAMVAALSPADINY : :: ::...::::..: :::.:.::. .: mKIAA4 ASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSY 330 340 350 360 370 380 40 50 60 70 80 90 mKIAA4 DETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLLYAQGLGDITDTNTVP ::.:::::.:.:::.:. . .::::.. :.::...:..::. : .:. mKIAA4 DESLSTLRFANRAKNIKNKPRVNEDPKDTLLREFQEEIARLKAQLEKKGMLGKRPRRKSS 390 400 410 420 430 440 100 110 120 130 140 mKIAA4 GGPKLTNALVGMSPSSSLSA-LSSRAASVSSLHERILFAPGSEEAIERLKETEKIIAELN : ..: .:. .: . : .. . . .. :. : : :.: :. :. . . . mKIAA4 RRKKAVSAPAGYPEGSVIEAWVAEEEDDNNNNHHPP--QPILEAALE--KNMENYLQDQK 450 460 470 480 490 500 150 160 170 180 190 200 mKIAA4 ETWEEK---LRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSE : ::. .. ... :.. : : : :: mKIAA4 ERLEEEKAAIQDDRSLVSEEKQKLLEEKEKMLEDLRREQQATELLAAKYKAMESKLLIGG 510 520 530 540 550 560 210 220 230 240 250 260 mKIAA4 CLLYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVTLEPCEGADT mKIAA4 RNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEMLLRDEETMELRGTYSSLQQEVEVKT 570 580 590 600 610 620 >>mKIAA0359 ( 757 res) mbg06791 (757 aa) initn: 291 init1: 261 opt: 263 Z-score: 221.9 bits: 52.4 E(): 3.2e-07 Smith-Waterman score: 263; 49.383% identity (49.383% ungapped) in 81 aa overlap (1-81:305-385) 10 20 30 mKIAA4 SVLTWLLRENLGGNSRTAMVAALSPADINY : :: ::...::::..:.::: ..::. : mKIAA0 ATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA4 DETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLLYAQGLGDITDTNTVP .:::.:::::.:::.:. . .::::.. :.::...:..::. : ...: mKIAA0 EETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRSIGRRKRREKRR 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA4 GGPKLTNALVGMSPSSSLSALSSRAASVSSLHERILFAPGSEEAIERLKETEKIIAELNE mKIAA0 EGGGSGGGGEEEEEEGEEGEEDGDDKDDYWREQQEKLEIEKRAIVEDHSLVAEEKMRLLK 400 410 420 430 440 450 >>mKIAA1590 ( 590 res) mph00219 (590 aa) initn: 262 init1: 152 opt: 211 Z-score: 180.3 bits: 44.3 E(): 6.7e-05 Smith-Waterman score: 211; 41.250% identity (44.000% ungapped) in 80 aa overlap (228-307:3-77) 200 210 220 230 240 250 mKIAA4 LNEDPLMSECLLYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVT ::::: : .. :::.:.. .:: .:: mKIAA1 TEQDIVLHGLDLESEHCVFEN---AGG--TVT 10 20 260 270 280 290 300 310 mKIAA4 LEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEP : : .:.. ::: .... . : .: :..:....::::::..: . ::. mKIAA1 LIPLRGSQCSVNGVQIVDATQLNQGAVILLGRTNMFRFNHPKEAAKLREKRKSGLLSSFS 30 40 50 60 70 80 320 330 340 350 360 370 mKIAA4 VDWAFAQRELLEKQGIDMKQAISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSESCPV mKIAA1 LSMTDLSKSCENLSAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSDKAELERM 90 100 110 120 130 140 1138 residues in 1 query sequences 1767879 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:01:56 2006 done: Mon Mar 27 11:01:57 2006 Scan time: 1.090 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]