FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1685.ptfa, 1060 aa vs ./tmplib.26680 library 1767957 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 11.1961+/-0.00796; mu= -13.2080+/- 0.524 mean_var=376.8054+/-93.206, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0661 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0978 ( 1579 res) mbg02158 (1579) 299 43 0.00031 >>mKIAA0978 ( 1579 res) mbg02158 (1579 aa) initn: 681 init1: 258 opt: 299 Z-score: 168.4 bits: 43.4 E(): 0.00031 Smith-Waterman score: 634; 25.261% identity (31.558% ungapped) in 1243 aa overlap (1-1060:402-1579) 10 20 30 mKIAA1 IRQEIEKEKKVELWKEQFFENYYGQSSGLS .:::.::::::: :::.:::.::::. ::. mKIAA0 ALNNEFFTHAAQSWRERLADGEFTHEMQVRLRQEMEKEKKVEQWKEKFFEDYYGQKLGLT 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 LEDSQKLTASSSDPKAKKTPAEQPKSILPSEASPVRIVPVVPQSECKEEAVQIPSPSQKE :.: . . . :.:. . .:. :... :. :.. mKIAA0 KEESLQQKEVQEEAKVKSGLCVSGESVRPQRG---------------------PNTRQRD 440 450 460 470 100 110 120 130 140 mKIAA1 EN-QDEARPDSKSPEPVLASASNTNELITMKPIKSPKDEGLLEQKPVACAEQESEKENHV . . ..::: : . : : : : . :.. :. : .. : . : ... mKIAA0 GHFKKRSRPD-------LRTRSRRN--IYKK--QEPEQAGV--AKDASAAPDVSLSKDTK 480 490 500 510 150 160 170 180 190 200 mKIAA1 TTTSRNNKSENQEALAISPSKSKNAGLQKPIIKPV-AEASPL-----NPDMKMP--PATV : . :.. . .. . . .. ..:. . . :: . : .:: ..: : . mKIAA0 TDLAGVNSTPGPDVSSATSGQEGPKCPSEPVASQIQAERDNLACASASPD-RIPTLPQDT 520 530 540 550 560 570 210 220 230 240 250 mKIAA1 TDQIQESLKRKSSLTDEEATSSW-EKRPRITENRQH-----QQPFQVSPQPFLNRGDRVQ .:: .. :::: ..::..:. ::.::. :.:: .. .::: .. mKIAA0 VDQETKDQKRKS--FEQEASASFPEKKPRL-EDRQSFRNTIESVHTEKPQPTKEEP---- 580 590 600 610 620 260 270 280 290 300 310 mKIAA1 VRKVPPLKIPVSRISPMLFS----TSQVSPRARFPISITSPYR-TGARTLADIKAKAQLV ::::..: .:::.: . : :. :: ::. .: :::::::::::.: . mKIAA0 --KVPPIRIQLSRIKPPWVAKGRPTYQICPRI-VPITESSCRGWTGARTLADIKARA--L 630 640 650 660 670 680 320 330 340 350 360 mKIAA1 KAQKAAAAAAAAAAAAASVGGTIPGLGPGGGQSP--REGGER-KIAGGGS-AGSDPVSTN .:. : . .:....:: : ::::: : ::: : . .: :: : . : . mKIAA0 QARGARGYHCNRETATTAIGG---GGGPGGGGSGAIDEGGGRDSSSGDGSEACGHPEPRG 690 700 710 720 730 740 370 380 390 400 410 mKIAA1 GKGPTLELAGTGSRGGTRELLPCGPQPETNMPGQAQPPGI---SGAQLQQTSS-----VP . . . : :. .: :. : :: : . :..: : ..:.:.. : :: mKIAA0 APSTSGESASDLQR--TQLLPPC-PLNGEHTPAEAAMPRARREDSASLRKEESCLLKRVP 750 760 770 780 790 420 430 440 450 460 470 mKIAA1 TGLASSGA--CTSVPLPAHIEISNSEKPNLHKATATAA----SPCHLQDPRS-CRLEKAL :. .:: .. :. . . : : . : .: .: : : :. : :.. mKIAA0 -GVLTSGLEDASQPPIAPTGDQPCQALPPLSSQTPVAEMLTEQPKLLLDDRTEC--ESSR 800 810 820 830 840 850 480 490 500 510 520 mKIAA1 SPTGPPLISGASTVYF-VAD--GTVEPKAGSNKNAP---KPS-----ALAKTTAPAPLDM :: . : .:. : ..: : .: .: . : :. .::. : : mKIAA0 EDQGPTIPSESSSGRFPLGDLLGGGSDQAFDNMKEPVSMTPTFISELSLANYLQDRPDDD 860 870 880 890 900 910 530 540 550 560 570 mKIAA1 TSSPVTTASLEKLPVPQISGTATSTGSAPSSSTLPAASS---LKT--PGTSANMNGPISR . .:. : . : . : . ....:.: .: :. .:: : . :. : . mKIAA0 GLGLGATGLLIRESSRQEALTEAFASGSPTS-WVPILSNYEVIKTSDPESRENIPCPEPQ 920 930 940 950 960 970 580 590 600 610 620 mKIAA1 TSSSIPANNPLV--TQLLQGKDVPLEQILPKPL----TKIEMKTVPLTTKEEKGIGIFPG . ::. :. . . . . : : : . . : : : .::. :. mKIAA0 DEKEWERAVPLIAATESVPQPESCISHWTPPPAAVGSTGSDSEQVDLERLEMNGISEAPS 980 990 1000 1010 1020 1030 630 640 650 660 670 680 mKIAA1 ISVMESSSREEVNGRQAHLAIPQLGKPLQSKQLSQVPRPVF-TAKDRKDPCIDTHQYREG .: : . .. ..::. . .. ....... : . :. :: . . . mKIAA0 P---HSESTDTASDSEGHLS--EDSSEVDASEVTVVKGSLGGDEKQDWDPSASLSKVNND 1040 1050 1060 1070 1080 690 700 710 mKIAA1 LSKTTQD---QLFQTLIQRA------------------QRQSVLSFVP--------PSQF :: :. :. ..:. : .:: . : : . mKIAA0 LSVLTRTGGVAASQSWVSRVCSVPHKIPDSLLLSSTECQPRSVCPLRPGSSVEVTNPLVM 1090 1100 1110 1120 1130 1140 720 730 740 750 mKIAA1 NFAHSGFHLEDI--------------------STSQKFMLG------FAGRRTSKPAMAG .. :... :: . : .. . : .:.: . :.. mKIAA0 HLLHGNLPLEKVLPPGHRSSRLESSQLPLREQSQDRGTLQGTGENNRLAARINPGSAQTL 1150 1160 1170 1180 1190 1200 760 770 780 790 800 mKIAA1 HYLLNISTYGRGTENIKRTHSVNPDDRFCLSSPTEALRMGHADYKNT--TG---EISSKE . . ..:: .. .. : : ... . .: : . . : .: ::.::: mKIAA0 KESILAQSYGASAGLVRAMASKAPAMSQKIAKMVTSLDSQHPETELTPSSGNLEEIDSKE 1210 1220 1230 1240 1250 1260 810 820 830 840 850 860 mKIAA1 DESD---EDRVGDEQEPISVKEEPWAS--QSSGRHPHHGEA--SSTNDCLASKNGKTEAP :. :.. : . .: .: :. : : : :::: :. . .:.. mKIAA0 HLSSFLCEEQ--KEGHSLSQGSDPGAAPGQCLGDHTTSKVPCFSSTNVSLSFGSEQTDGT 1270 1280 1290 1300 1310 1320 870 880 890 900 910 mKIAA1 VSEQTTLG-QENYIFSRGQA--------SDEKS-LPRDFIPAAHKQMTHAVRGKTVCSSP .:.:.. : .:. .:. :.. :.:.. :: . :. .. . .. .: .. mKIAA0 LSDQNNAGGHEKKLFGPGNTVTTLQCPRSEEQTPLPAEVPPVFPSRKIEPSKN-SVSGGV 1330 1340 1350 1360 1370 1380 920 930 940 mKIAA1 ELFNSTALSLP----ADS-PTHQPLLLPPLQTP------------KLYGS---------- . . . : ::: :.: .: :... .: : mKIAA0 QTTRENRMPKPPPVSADSIKTEQTFLRDPIKADAENRKAAGYSSLELVGHLQGMPFVVDL 1390 1400 1410 1420 1430 1440 950 960 970 980 990 mKIAA1 -----PTQIGPSYRGMINVST-SSDMDHNSAIPGSQVSSNVGDV-MSFSVTVTTIP---- : . : .. .. :. :... ..:. :. . ... . ...: . .:.: mKIAA0 PFWKLPREPGKGFSQPLEPSSIPSQLNIKQALYGKLSKLQLSPTSFNYSSSSATFPKGLA 1450 1460 1470 1480 1490 1500 1000 1010 1020 1030 1040 mKIAA1 ------ASQAMNPSSHGQTIPVQTFPDDNSIEDTPSKCYCRLKAMIMCKGCGAFCHDDCI . .: ..: .. .: : :....:. .: : :::::::.::::::::::: mKIAA0 GGVVQLSHKASFGTGHTASLSLQMFADSSAVESISLQCACSLKAMIMCQGCGAFCHDDCI 1510 1520 1530 1540 1550 1560 1050 1060 mKIAA1 GPSKLCVSCLVVR ::::::: ::::: mKIAA0 GPSKLCVLCLVVR 1570 1060 residues in 1 query sequences 1767957 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:50:56 2006 done: Mon Mar 27 10:50:57 2006 Scan time: 1.110 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]