FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mKIAA0665.ptfa, 905 aa
 vs ./tmplib.26680 library

1768112 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 7.4409+/-0.00741; mu= 9.6054+/- 0.490
 mean_var=389.4776+/-95.267, 0's: 0 Z-trim: 8  B-trim: 25 in 1/35
 Lambda= 0.0650

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 39, opt: 27, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mKIAA1821  ( 268 res)   mbg06507                   ( 268)  925  101 2.7e-22


>>mKIAA1821  ( 268 res)   mbg06507                        (268 aa)
 initn: 1039 init1: 686 opt: 925  Z-score: 492.8  bits: 100.6 E(): 2.7e-22
Smith-Waterman score: 925;  56.078% identity (56.746% ungapped) in 255 aa overlap (653-905:14-267)

            630       640       650       660       670       680  
mKIAA0 SELEKDSAAAGEQHGRLRQENLQLVHRANALEEQLKEQEFRAQEKVLEETRKQKELLCKM
                                     :::..:.::  :.. . ::.:...:. ::.
mKIAA1                  WGTVAPGSAEVHELEEMVKDQETTAEQALEEEARRHREVYCKL
                                10        20        30        40   

            690       700       710       720       730       740  
mKIAA0 EREKSIEIENLQARLQQLDEENSELRSCTPCLKANIERLEEEKQKMLDEIEELTQRLSEE
       ::::: :.: :..:.:::.:::..::. .  ::.. :.:.::.:.: :..:. . ::..:
mKIAA1 EREKSTELELLNTRVQQLEEENTDLRTTVARLKSQTEKLDEERQRMSDRLEDTSLRLKDE
            50        60        70        80        90       100   

            750       760       770       780       790        800 
mKIAA0 QENKRKMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLRLEVEQR-RGRSSSLGLQ
       ..  ..: :.: ..: .::...:::::::::::..:::::. .:. :.  :::::: :: 
mKIAA1 MDLYKRMMDKLRQNRLEFQKEREATQELIEDLRRELEHLQMYKLDCERPGRGRSSS-GLG
           110       120       130       140       150        160  

             810       820       830       840       850        860
mKIAA0 EYNSRARESELEQEVRRLKQDNRNLKEQNDELNGQIITLSIQGAKSLFST-SFSESLAAE
       :.:.:::: :::.::.::::.:..:..:::.:::::..::.  ::.::.: . ..:::::
mKIAA1 EFNARAREVELEHEVKRLKQENHKLRDQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAE
            170       180       190       200       210       220  

              870       880       890       900      
mKIAA0 ISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAILETNPSILEVK 
       :...::::::::...::::::::..:.:.::.:::. ::::::.: 
mKIAA1 IDTASRDELMEALKEQEEINFRLRQYMDKIILAILDHNPSILEIKH
            230       240       250       260        




905 residues in 1 query   sequences
1768112 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:25:44 2006 done: Mon Mar 27 10:25:45 2006
 Scan time:  0.950 Display time:  0.020

Function used was FASTA [version 3.4t11 Apr 17, 2002]