# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg06236.fasta.nr -Q ../query/mKIAA1777.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1777, 502 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920830 sequences Expectation_n fit: rho(ln(x))= 5.0267+/-0.000181; mu= 11.7987+/- 0.010 mean_var=65.9652+/-12.774, 0's: 35 Z-trim: 37 B-trim: 0 in 0/66 Lambda= 0.157913 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148877523|gb|AAI45696.1| Unc5d protein [Mus mus ( 884) 3431 790.8 0 gi|54036591|sp|Q8K1S2.1|UNC5D_MOUSE RecName: Full= ( 956) 3431 790.8 0 gi|219521598|gb|AAI44785.1| Unknown (protein for M ( 882) 3425 789.4 0 gi|194226449|ref|XP_001494141.2| PREDICTED: simila ( 953) 3378 778.7 0 gi|109086131|ref|XP_001088208.1| PREDICTED: netrin ( 953) 3362 775.1 0 gi|119583786|gb|EAW63382.1| unc-5 homolog D (C. el ( 924) 3356 773.7 0 gi|54036576|sp|Q6UXZ4.1|UNC5D_HUMAN RecName: Full= ( 953) 3356 773.7 0 gi|193783712|dbj|BAG53621.1| unnamed protein produ ( 529) 3350 772.2 0 gi|73979331|ref|XP_539972.2| PREDICTED: similar to ( 958) 3346 771.4 0 gi|119918194|ref|XP_598235.3| PREDICTED: similar t ( 975) 3342 770.5 0 gi|224080849|ref|XP_002193634.1| PREDICTED: simila ( 959) 2783 643.2 9.2e-182 gi|148700837|gb|EDL32784.1| unc-5 homolog D (C. el ( 836) 2501 578.9 1.8e-162 gi|149057865|gb|EDM09108.1| unc-5 homolog D (C. el ( 836) 2491 576.6 8.8e-162 gi|81230842|gb|ABB59712.1| Unc5Db [Danio rerio] ( 894) 2110 489.8 1.2e-135 gi|126540859|emb|CAM47035.1| novel unc-5 homolog f ( 901) 2110 489.8 1.3e-135 gi|125816113|ref|XP_001342230.1| PREDICTED: Unc5Db ( 936) 2110 489.9 1.3e-135 gi|149633658|ref|XP_001513625.1| PREDICTED: simila ( 621) 2106 488.8 1.8e-135 gi|219519736|gb|AAI44784.1| Unknown (protein for M ( 875) 2062 478.9 2.4e-132 gi|47228412|emb|CAG05232.1| unnamed protein produc ( 837) 1865 434.0 7.5e-119 gi|189533783|ref|XP_694636.3| PREDICTED: Unc5Da, p ( 603) 1796 418.2 3.1e-114 gi|81230840|gb|ABB59711.1| Unc5Da [Danio rerio] ( 934) 1797 418.5 3.8e-114 gi|54036590|sp|Q8JGT4.1|UNC5B_XENLA RecName: Full= ( 943) 1588 370.9 8.2e-100 gi|33305855|gb|AAQ02790.1|AF380352_1 UNC5H2 [Gallu ( 945) 1558 364.1 9.3e-98 gi|24710917|gb|AAM95701.1| transmembrane receptor ( 934) 1548 361.8 4.5e-97 gi|54036589|sp|Q8IZJ1.2|UNC5B_HUMAN RecName: Full= ( 945) 1548 361.8 4.5e-97 gi|224052157|ref|XP_002191762.1| PREDICTED: unc-5 (1001) 1547 361.6 5.6e-97 gi|21753684|dbj|BAC04382.1| unnamed protein produc ( 554) 1543 360.5 6.5e-97 gi|109089526|ref|XP_001106162.1| PREDICTED: simila (1131) 1539 359.8 2.2e-96 gi|86143158|gb|ABC86679.1| p53-regulated receptor ( 945) 1528 357.3 1.1e-95 gi|148744913|gb|AAI42197.1| UNC5B protein [Bos tau ( 945) 1515 354.3 8.3e-95 gi|54036537|sp|O08722.1|UNC5B_RAT RecName: Full=Ne ( 945) 1513 353.8 1.1e-94 gi|73952838|ref|XP_861399.1| PREDICTED: similar to ( 934) 1512 353.6 1.3e-94 gi|73952840|ref|XP_850428.1| PREDICTED: similar to ( 945) 1512 353.6 1.3e-94 gi|73952836|ref|XP_861371.1| PREDICTED: similar to ( 953) 1512 353.6 1.3e-94 gi|73952834|ref|XP_861343.1| PREDICTED: similar to ( 953) 1512 353.6 1.3e-94 gi|34785821|gb|AAH57560.1| Unc5b protein [Mus musc ( 934) 1509 352.9 2.1e-94 gi|54036592|sp|Q8K1S3.1|UNC5B_MOUSE RecName: Full= ( 945) 1509 352.9 2.1e-94 gi|148700216|gb|EDL32163.1| unc-5 homolog B (C. el (1008) 1509 353.0 2.3e-94 gi|29145032|gb|AAH48162.1| Unc5b protein [Mus musc (1008) 1509 353.0 2.3e-94 gi|74199411|dbj|BAE34445.1| unnamed protein produc ( 945) 1507 352.5 2.9e-94 gi|194205985|ref|XP_001917727.1| PREDICTED: simila ( 935) 1505 352.0 4e-94 gi|74188527|dbj|BAE28019.1| unnamed protein produc ( 901) 1502 351.3 6.2e-94 gi|12857776|dbj|BAB31108.1| unnamed protein produc ( 945) 1501 351.1 7.6e-94 gi|119893614|ref|XP_612601.3| PREDICTED: similar t ( 930) 1380 323.5 1.5e-85 gi|224049433|ref|XP_002192187.1| PREDICTED: unc-5 ( 979) 1373 322.0 4.7e-85 gi|74211267|dbj|BAE37698.1| unnamed protein produc ( 876) 1370 321.2 6.9e-85 gi|149701735|ref|XP_001497590.1| PREDICTED: simila ( 931) 1370 321.3 7.2e-85 gi|54036539|sp|O08747.1|UNC5C_MOUSE RecName: Full= ( 931) 1370 321.3 7.2e-85 gi|81230838|gb|ABB59710.1| Unc5C [Danio rerio] ( 948) 1370 321.3 7.3e-85 gi|74189886|dbj|BAE24575.1| unnamed protein produc ( 950) 1370 321.3 7.3e-85 >>gi|148877523|gb|AAI45696.1| Unc5d protein [Mus musculu (884 aa) initn: 3431 init1: 3431 opt: 3431 Z-score: 4217.9 bits: 790.8 E(): 0 Smith-Waterman score: 3431; 100.000% identity (100.000% similar) in 502 aa overlap (1-502:383-884) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|148 GGFQTFNFKTVRQGNSLLLNPAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 480 490 500 510 520 530 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 540 550 560 570 580 590 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 600 610 620 630 640 650 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS 660 670 680 690 700 710 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 720 730 740 750 760 770 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 780 790 800 810 820 830 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL 840 850 860 870 880 >>gi|54036591|sp|Q8K1S2.1|UNC5D_MOUSE RecName: Full=Netr (956 aa) initn: 3431 init1: 3431 opt: 3431 Z-score: 4217.4 bits: 790.8 E(): 0 Smith-Waterman score: 3431; 100.000% identity (100.000% similar) in 502 aa overlap (1-502:455-956) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|540 GGFQTFNFKTVRQGNSLLLNPAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 850 860 870 880 890 900 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL 910 920 930 940 950 >>gi|219521598|gb|AAI44785.1| Unknown (protein for MGC:1 (882 aa) initn: 3425 init1: 3425 opt: 3425 Z-score: 4210.5 bits: 789.4 E(): 0 Smith-Waterman score: 3425; 99.801% identity (99.801% similar) in 502 aa overlap (1-502:381-882) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|219 DYGVDVIDSSALTGNSLLLNPAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 480 490 500 510 520 530 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 540 550 560 570 580 590 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 600 610 620 630 640 650 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS 660 670 680 690 700 710 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 720 730 740 750 760 770 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|219 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNRINRNLSYFATQSSPSAVI 780 790 800 810 820 830 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL 840 850 860 870 880 >>gi|194226449|ref|XP_001494141.2| PREDICTED: similar to (953 aa) initn: 3378 init1: 3378 opt: 3378 Z-score: 4152.1 bits: 778.7 E(): 0 Smith-Waterman score: 3378; 97.809% identity (99.602% similar) in 502 aa overlap (1-502:452-953) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|194 GGFQTFNFKTVRQGNSLLLNSSMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::: gi|194 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRSFSTMHPRNKTPYIQNLSSLPTRTE 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL ::::::::..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EVTCGPPDIIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|194 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 850 860 870 880 890 900 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.:::::::::::::::::::::::::: :.:.::::::::::: gi|194 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNITESQLDEADFNYSRQNGL 910 920 930 940 950 >>gi|109086131|ref|XP_001088208.1| PREDICTED: netrin rec (953 aa) initn: 3362 init1: 3362 opt: 3362 Z-score: 4132.4 bits: 775.1 E(): 0 Smith-Waterman score: 3362; 97.410% identity (99.402% similar) in 502 aa overlap (1-502:452-953) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|109 GGFQTFNFKTVRQGNSLLLNSAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::: :::::::..:::.:::::::::::::::::::: gi|109 KVKVQSSFMVSLGVSERAEYHGKNHSRTFPHGNNHSFSTMHPRNKTPYIQNLSSLPTRTE 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EVTCGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|109 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 850 860 870 880 890 900 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.::::::::::::::::::::::::.: :.:.::::::::::: gi|109 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNISESQLDEADFNYSRQNGL 910 920 930 940 950 >>gi|119583786|gb|EAW63382.1| unc-5 homolog D (C. elegan (924 aa) initn: 3356 init1: 3356 opt: 3356 Z-score: 4125.3 bits: 773.7 E(): 0 Smith-Waterman score: 3356; 97.211% identity (99.203% similar) in 502 aa overlap (1-502:423-924) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|119 GGFQTFNFKTVRQGNSLLLNSAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::: :::::::..:::.::::: :::::::::::::: gi|119 KVKVQSSFMVSLGVSERAEYHGKNHSRTFPHGNNHSFSTMHPRNKMPYIQNLSSLPTRTE 460 470 480 490 500 510 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 520 530 540 550 560 570 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVTCGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 580 590 600 610 620 630 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 640 650 660 670 680 690 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|119 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 700 710 720 730 740 750 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 760 770 780 790 800 810 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 820 830 840 850 860 870 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.::::::::::::::::::::::::.: :.:.::::::::::: gi|119 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNISESQLDEADFNYSRQNGL 880 890 900 910 920 >>gi|54036576|sp|Q6UXZ4.1|UNC5D_HUMAN RecName: Full=Netr (953 aa) initn: 3356 init1: 3356 opt: 3356 Z-score: 4125.1 bits: 773.7 E(): 0 Smith-Waterman score: 3356; 97.211% identity (99.203% similar) in 502 aa overlap (1-502:452-953) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|540 GGFQTFNFKTVRQGNSLLLNSAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::: :::::::..:::.::::: :::::::::::::: gi|540 KVKVQSSFMVSLGVSERAEYHGKNHSRTFPHGNNHSFSTMHPRNKMPYIQNLSSLPTRTE 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 EVTCGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|540 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 850 860 870 880 890 900 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.::::::::::::::::::::::::.: :.:.::::::::::: gi|540 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNISESQLDEADFNYSRQNGL 910 920 930 940 950 >>gi|193783712|dbj|BAG53621.1| unnamed protein product [ (529 aa) initn: 3350 init1: 3350 opt: 3350 Z-score: 4121.3 bits: 772.2 E(): 0 Smith-Waterman score: 3350; 97.012% identity (99.004% similar) in 502 aa overlap (1-502:28-529) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDIKVK ::::::::::::::::::::::::::::::::: gi|193 MELMIQEKSFGNSLLLNSAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDIKVK 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 VQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTELRT ::::::::::::::::::::::: :::::::..:::.::::: ::::::::::::::::: gi|193 VQSSFMVSLGVSERAEYHGKNHSRTFPHGNNHSFSTMHPRNKMPYIQNLSSLPTRTELRT 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 TGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSPEVT ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|193 TGVFGHLGGRLVMPNKGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSPEVT 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 CGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLLDPF ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 CGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLLDPF 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 ACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQEVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|193 ACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQEVV 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 SDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSSNRQ :::::::::::::::::::::::::::.::::::::::::::::::::::::::: :::: gi|193 SDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCSNRQ 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 PLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDSTFPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 PLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDSTFPA 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 QTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 QTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNL 430 440 450 460 470 480 460 470 480 490 500 mKIAA1 WEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL ::::::.::::::::::::::::::::::::.: :.:.::::::::::: gi|193 WEARHQHDGDLDSLACALEEIGRTHTKLSNISESQLDEADFNYSRQNGL 490 500 510 520 >>gi|73979331|ref|XP_539972.2| PREDICTED: similar to Net (958 aa) initn: 3346 init1: 3346 opt: 3346 Z-score: 4112.7 bits: 771.4 E(): 0 Smith-Waterman score: 3346; 97.211% identity (99.203% similar) in 502 aa overlap (1-502:457-958) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI ::::::::::::::::::::.::::::::: gi|739 GGFQTFNFKTVRQGNSLLLNSSMQPDLTVSRTYSGPICLQDPLDKELMTEASLFNPLSDI 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::: gi|739 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRSFSTMHPRNKTPYIQNLSSLPTRTE 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EVTCGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|739 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPWAFQ 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|739 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NWQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 850 860 870 880 890 900 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.::::::::::::::::::::::::.: :.:.::::::::::: gi|739 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNIAESQLDEADFNYSRQNGL 910 920 930 940 950 >>gi|119918194|ref|XP_598235.3| PREDICTED: similar to ne (975 aa) initn: 3342 init1: 3342 opt: 3342 Z-score: 4107.7 bits: 770.5 E(): 0 Smith-Waterman score: 3342; 97.012% identity (99.203% similar) in 502 aa overlap (1-502:474-975) 10 20 30 mKIAA1 RTYSGPICLQDPLDKELMTESSLFNPLSDI :::::::::::::::::::::::::::::: gi|119 GGFQTFNFKTVRQGNSLLLNPSMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDI 450 460 470 480 490 500 40 50 60 70 80 90 mKIAA1 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTE :::::::::::::::::::::::::::::::::::.:.:.: :::::::::::::::::: gi|119 KVKVQSSFMVSLGVSERAEYHGKNHSGTFPHGNNRSFTTVHARNKTPYIQNLSSLPTRTE 510 520 530 540 550 560 100 110 120 130 140 150 mKIAA1 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRTTGVFGHLGGRLVMPNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSP 570 580 590 600 610 620 160 170 180 190 200 210 mKIAA1 EVTCGPPDMLVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVTCGPPDMIVTTPFALTIPHCADVSSEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLL 630 640 650 660 670 680 220 230 240 250 260 270 mKIAA1 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPCAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|119 DPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFGCMSCNSLDYNLRVYCVDNTPWAFQ 690 700 710 720 730 740 280 290 300 310 320 330 mKIAA1 EVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPFTACQEVPFSRVWSS ::.:::::::::::::::::::::::::::.::::::::::::::::::::::::::: : gi|119 EVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPFTACQEVPFSRVWCS 750 760 770 780 790 800 340 350 360 370 380 390 mKIAA1 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQEDST 810 820 830 840 850 860 400 410 420 430 440 450 mKIAA1 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVI 870 880 890 900 910 920 460 470 480 490 500 mKIAA1 LNLWEARHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL :::::::::.:::::::::::::::::::::::::. :.:.:::.::::::: gi|119 LNLWEARHQHDGDLDSLACALEEIGRTHTKLSNITDSQLDEADFTYSRQNGL 930 940 950 960 970 502 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 20:01:21 2009 done: Sun Mar 15 20:08:21 2009 Total Scan time: 942.490 Total Display time: 0.190 Function used was FASTA [version 34.26.5 April 26, 2007]