FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0285.ptfa, 567 aa vs ./tmplib.26680 library 1768450 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9560+/-0.00626; mu= 1.3051+/- 0.415 mean_var=182.5055+/-44.623, 0's: 0 Z-trim: 2 B-trim: 137 in 1/35 Lambda= 0.0949 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4045 ( 724 res) mbg13096 ( 724) 212 41 0.00036 >>mKIAA4045 ( 724 res) mbg13096 (724 aa) initn: 547 init1: 153 opt: 212 Z-score: 167.2 bits: 41.2 E(): 0.00036 Smith-Waterman score: 492; 26.944% identity (38.039% ungapped) in 720 aa overlap (19-563:35-719) 10 20 30 40 mKIAA0 TRAGTRARGSMDPDWGQRDVGWAALLVLFAASLITVLGWMLQYARGLW .: : :. ::.:.: :: .. :.: mKIAA4 QLRAPCGHGCWGKSGRARRVCAVSMGSWLSEVQWLFLVSLFVAALGTVGLYLAQWA---- 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 LSRADGGRDSRPASAAEPGGSLRELGVWRSLLRLRATRTSTPEEAGVRGLLASLFAFKSF :..: : : ::: . :: : . : ::. ... :. mKIAA4 LAKA---RPP-PRRRAEP-----------DELRRRESDT----------LLSWILTRDSW 70 80 90 110 120 130 140 150 160 mKIAA0 RENWQRAWVRALNEQACRDGSSIQIAFEEIPQLPP--RASISHVTCVDQSERTMVLHCQL ..:: ::: ::: .: . :. ....:.. :. : . .. .:. : .: . :. :.. mKIAA4 GNQWQAAWVTALNYEAEKRGGPLRLSFQKDPR-PQSLQLTVEKVSSVVKSTQEKVVICHV 100 110 120 130 140 150 170 180 190 200 210 220 mKIAA0 SAEEVRFPISVTQQSPAAVSMETYHVTLTLPPTQLEVSLEEIPDEGLLVSWAFTDRPELS .: ..: .:. : .. . : : :. ..: .:: : . . :.:: :: . mKIAA4 VGETLQFLVSAGPASATGSECQLYDVHLSPFHLKVEFHMEE-KREDIQIRWSFTHVPETA 160 170 180 190 200 210 230 240 250 260 270 mKIAA0 LKVLPKLQTRERDEEQPELS-TVEELIKDAIVSTQPAMMVNLRA----------CSA--- .:. :. ... :: ..:.:.: . ...:..... . : . mKIAA4 IKIQPQAPGEKKALGVNMLSEALEDLFKHLVNAASPSVFLSTKPTQVKEAQSLQCPSSTA 220 230 240 250 260 270 mKIAA0 ----------------------------PGG----------------------------- ::. mKIAA4 QEPCPPKPPRAHELKLQVKNIRVSLINHPGASGLSHVCVAQLNDPEQRFISTLVRNTTDL 280 290 300 310 320 330 280 290 mKIAA0 ----------------LVL-------TPRSLLTLWQLHYE-----QGSPRN--------- ::: . ..:: . .: . ..:.. mKIAA4 SWEEEFTFELNAKSKELVLQISQDGCSSEGLLGIATIHLDLFRKQPNGPQTFRLISGTEP 340 350 360 370 380 390 300 310 320 330 340 mKIAA0 ----LGTPTS-----------STPRPSITPTKKIELDRTIMPDGTVVTTVTTVQSRPRVD ::. :. : : : . . ::: :::.:: ::::::::.:...:: : mKIAA4 DSLVLGSVTAEFSYVEPGELKSWPAPPPVSAAKIEKDRTVMPCGTVVTTVTAVKTKPRFD 400 410 420 430 440 450 350 360 370 mKIAA0 -GK---LSGATDLLYP--------------------PAGESHLS--------NGLDPVAE :. :.. . . : :.... : :: ::::: mKIAA4 TGRATPLNSESPVRTPVTVKVIEKDISVQAISCHSAPVSKTFSSSDTELLVLNGSDPVAE 460 470 480 490 500 510 380 390 400 410 420 mKIAA0 TAIRQLTEPSGRAAKKTPTKRSTLIISGVSKVPIAQDE-LALSLGYAASLEASMQDDA-- .:::::.: :.. :.: :.::.::::.::. ..::. :: : ::::.... : :: mKIAA4 VAIRQLSE-SSKLKLKSPRKKSTIIISGISKTSLSQDHNAALMLDYAASMDSTNQGDATS 520 530 540 550 560 570 430 440 450 460 470 mKIAA0 ------GTSGGPSSPP--SDPSATSPG--PVDA-LSSPTSVQEADETTRSDIS-ERPSVD .: .. ..:: ..:. : :. : . :.: .:. .. : . ..:. : mKIAA4 ALCHPEATEASATTPPEENEPAQTLPALKPRENDLDSWELEKESPVASWSGPALQEPDGD 580 590 600 610 620 630 480 490 500 510 520 530 mKIAA0 DVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRPRQKEAGLSQSHDDLSNTTATPSV .. . ::. : ..: :: ..::.:.::.:::: .::. ::::::.:: : mKIAA4 ELSESSLSTS--ELGAMKKHKGGLLRKGAKLFFRRRHQQKDPGLSQSHNDLV-FLQQPEG 640 650 660 670 680 540 550 560 mKIAA0 RKKAGSFSRRLIKR---FSFKSKPKANGNPSPQL :.: :. ::..: ..: :: : mKIAA4 RQKKGATLGRLLNRKLLTRHRGKHTMNGVPREPCI 690 700 710 720 567 residues in 1 query sequences 1768450 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:16:33 2006 done: Mon Mar 27 10:16:34 2006 Scan time: 0.780 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]