FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1513.ptfa, 621 aa vs ./tmplib.26680 library 1768396 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.4598+/-0.00378; mu= 18.0188+/- 0.253 mean_var=86.2518+/-19.658, 0's: 0 Z-trim: 17 B-trim: 0 in 0/36 Lambda= 0.1381 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0461 ( 853 res) mbg03064 ( 853) 316 73 1e-13 mKIAA0543 ( 937 res) mpf00666 ( 937) 225 55 3.2e-08 mKIAA4237 ( 519 res) mfj17080 ( 519) 172 44 3.3e-05 mKIAA1954 ( 643 res) mpj01436 ( 643) 163 43 0.00013 mKIAA4218 ( 601 res) mpm12334 ( 601) 161 42 0.00017 mKIAA1588 ( 617 res) mbp00262 ( 617) 161 42 0.00017 mKIAA1611 ( 558 res) mph00982 ( 558) 160 42 0.00018 mKIAA1431 ( 833 res) mfj27243 ( 833) 159 42 0.00027 mKIAA1862 ( 1098 res) mbg03386 (1098) 158 42 0.00037 mKIAA1710 ( 461 res) mbg19468 ( 461) 154 41 0.00037 mKIAA1852 ( 736 res) mej02019 ( 736) 152 40 0.00065 mKIAA4236 ( 919 res) mfj05191 ( 919) 151 40 0.00086 >>mKIAA0461 ( 853 res) mbg03064 (853 aa) initn: 141 init1: 104 opt: 316 Z-score: 338.4 bits: 73.2 E(): 1e-13 Smith-Waterman score: 369; 24.402% identity (26.842% ungapped) in 418 aa overlap (129-536:331-720) 100 110 120 130 140 150 mKIAA1 SLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDFRTPD-WASPTNATSHFPQ ::: :: .: . : : :. :.. : mKIAA0 ASERVFDWSMKNTYLPPPLVPNKAATVKPVGVTPAEPQE--LAGPVLQALPSPASTATPP 310 320 330 340 350 160 170 180 190 200 210 mKIAA1 PQPFNSFGLRLPQDITELPEWTEGYP-FYMAMGFPGYDLSAD-DLASKFQFSRGMRRSYD : . :: . : ::: . .. : .. : . :: . :. .. . mKIAA0 ATPTH------PQPSALPPSATEGTECLNVSEQEEGSPVTQDPEPASGGGGGSGVGKKEQ 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA1 AGFK-LMVVEYAESTNNCQAAKQFGVLEKNVRDW-RKVKP-QLQNAHAMRRAFRGPKNGR . : : :: .: :. :::..: .. .: : :. . : .: .. .:.. mKIAA0 LSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLSFEA----- 420 430 440 450 460 280 290 300 310 320 330 mKIAA1 FALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYD ....::.: .. . :...:.. :: .:.. . : ::: : : :.: :. mKIAA0 ----EEKLAEWVLIQREQQLPVNEETLFQKATKIGRSL---EGGFKISYEWAVRFMLRHH 470 480 490 500 510 520 340 350 360 370 380 mKIAA1 LS--LRHKV--PVPQHLAEDLTEKLVTYQQSVLALRRTHDYEVAQMGNADETPICLEVPS :. :. : .:.:.::. . :... ...: .... :: . :.. mKIAA0 LTPHARRAVAHTLPKHVAENAGLFIEFVQRQI----HNQDLPLSMIVAIDEISLFLDTEV 530 540 550 560 570 390 400 410 420 430 440 mKIAA1 RVTVDNQGEKPILVKTPGREKLRITAMLGVLADGRKLPPYIILRGTYIPPGKFPSGMEIR .. :.. :. . .: : . ..:..:::: :: ...:: .. :... .. mKIAA0 -LSSDDRKENAL--QTVGTGEPWCDVVLAILADGTVLPTLVFFRGQANRFANVPDSILLE 580 590 600 610 620 630 450 460 470 480 490 500 mKIAA1 CHRYGWMTEDLMQDWLEVVWRRRTGAVPRQRGMLILNGFRCHATDSVKSSMENMNTDMVI . :. ...:. : ::...: : ....::... : : .. : . . .: .. mKIAA0 AKDSGYSDDEIMELWSTRVWKKHT-ACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAV 640 650 660 670 680 690 510 520 530 540 550 560 mKIAA1 IPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLGLFLEWIMVA .:.: .:..: ::: . . ... .. ... mKIAA0 VPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAREMADAACDSDVLLQLVLVWLGEVLGVI 700 710 720 730 740 750 >>mKIAA0543 ( 937 res) mpf00666 (937 aa) initn: 246 init1: 217 opt: 225 Z-score: 240.0 bits: 55.1 E(): 3.2e-08 Smith-Waterman score: 225; 45.833% identity (45.833% ungapped) in 72 aa overlap (44-115:221-292) 20 30 40 50 60 70 mKIAA1 EMESRAYPLNLTLKEEQKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDE : : . .. .. .:: :...:.::: : mKIAA0 LRQKEIGSDILGPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSRE 200 210 220 230 240 250 80 90 100 110 120 130 mKIAA1 EWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFA :: .: .::: :::. :.:.:: . ::: : :::.:..::. mKIAA0 EWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSP 260 270 280 290 300 310 140 150 160 170 180 190 mKIAA1 ENEESDFRTPDWASPTNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGY mKIAA0 SLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSLYRPG 320 330 340 350 360 370 >>mKIAA4237 ( 519 res) mfj17080 (519 aa) initn: 125 init1: 125 opt: 172 Z-score: 185.8 bits: 44.3 E(): 3.3e-05 Smith-Waterman score: 172; 22.442% identity (25.279% ungapped) in 303 aa overlap (63-347:10-296) 40 50 60 70 80 90 mKIAA1 EEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRM :..: . :..::: :. .:. :::.:: mKIAA4 VLGFQELVSFEDVIVDFTQEEWSSLNPDQRNLYRDVMLE 10 20 30 100 110 120 130 140 mKIAA1 NYETVLSLEFPFPKPDMINRLERDEECPNSD----EWRLQGVTFAENEESDFRTPDWASP ::... .. . . ::..:. ::..: .. ::.:: : ...: mKIAA4 NYQNLATVGYQLIKPSLISWLEQEEFSKGQKIVFPEWKLQLETKCSAFQQEFLRG----- 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 TNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGF-PGYD-LSADDLASKFQF : .:.. . .: : .: . ..: :. : :. : . .. . : . mKIAA4 -NISSRMQMQTGINR-GRELCDGTQYGDFFSELSPLRTDMKTQPAQDNYGCSQYRKDFLM 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 SRGMRRSYDAGFKLMVVEYAESTNNCQAAKQFGVLEKNVRDWRKVKPQLQNAH--AMRRA ..:. :: :: .: :. . ... . ::. . : ....: . .:. mKIAA4 ---LQRKNCAGEKLSEFSQSEETGMTPVKEKIDTQEKGFECSDCGKSFMSQSHLQTHQRT 160 170 180 190 200 270 280 290 300 310 mKIAA1 FRGPK------NGRFALVDQRVAEYVRYMQAKGDPITRE---AMQLKA-LEIAQEMNIPE : : :: .....:.: .. ..:: .: ... : :.: .. . : mKIAA4 HSGDKLYEWNECGR-SFINSRLAVLIETLNAKKPHRCKECGKGYRYPAYLNIHMRTHTGE 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA1 KGFKASLGWCRRMMRRYDLSLRHKVPVPQHLAEDLTEKLVTYQQSVLALRRTHDYEVAQM : .. :.. . .. : .. : .: mKIAA4 KPYE-----CKECGKAFNYSNSFQIHGRTHTGEKPYVCSQCGKAFTQHSGLSIHVRSHTG 270 280 290 300 310 320 380 390 400 410 420 430 mKIAA1 GNADETPICLEVPSRVTVDNQGEKPILVKTPGREKLRITAMLGVLADGRKLPPYIILRGT mKIAA4 DKPYGCKECGKAFLTSSRLIQHIRTHTGEKPFVCVKCGKAFAISSNLNGHLKLHAEEKTC 330 340 350 360 370 380 >>mKIAA1954 ( 643 res) mpj01436 (643 aa) initn: 215 init1: 160 opt: 163 Z-score: 175.1 bits: 42.6 E(): 0.00013 Smith-Waterman score: 172; 36.458% identity (42.683% ungapped) in 96 aa overlap (63-157:23-105) 40 50 60 70 80 90 mKIAA1 EEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRM : .::. :..:::. . :..:::.:: mKIAA1 PAHTEAGMAPRPPTAKPQESVTFKDVAVNFTQEEWHHVGPAQRSLYRDVMLE 10 20 30 40 50 100 110 120 130 140 150 mKIAA1 NYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDFRTPDWAS-PTNA ::. ..:: . ::..: .::. :: : : ..:.: . ::: . : .. mKIAA1 NYNHLVSLGYQVSKPEVIFKLEQGEE-P----W------ISEKEIQRPFCPDWKTRPESS 60 70 80 90 100 160 170 180 190 200 210 mKIAA1 TSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGYDLSADDLASKFQFSRGMR : :: mKIAA1 RS--PQQGVSEVFLRTNVLSHTTIGDIWNVAIQGHQESGRRHLGPEASSQKKITTLEKKI 110 120 130 140 150 >>mKIAA4218 ( 601 res) mpm12334 (601 aa) initn: 155 init1: 155 opt: 161 Z-score: 173.2 bits: 42.1 E(): 0.00017 Smith-Waterman score: 161; 33.333% identity (33.684% ungapped) in 96 aa overlap (60-154:54-149) 30 40 50 60 70 80 mKIAA1 QKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREV :. : .::. ::..:: : :..::::: mKIAA4 PHIWSALGSPLAEKLRREMAVDLLAARGTEPVTFRDVAVSFSQDEWLHLDPAQRSLYREV 30 40 50 60 70 80 90 100 110 120 130 140 mKIAA1 MRMNYETVLSLEFPFPKPDMINRLERDEE-CPNSDEWRLQGVTFAENEESDFRTPDWASP : :: .. :: : : .:..:.. .. : . . . . : : . : mKIAA4 MLENYSNLASLGFQASIPPVIGKLQKGQDPCMEREAPEDTCLDFEIWPEIEALPPKQDVL 90 100 110 120 130 140 150 160 170 180 190 200 mKIAA1 TNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGYDLSADDLASKFQFSR :. ::: mKIAA4 TKETSHGLIKNGSTKCVYWKISFGELVKTECRDIAQEQEKKVHGPGAESPKETTSEDGTP 150 160 170 180 190 200 >>mKIAA1588 ( 617 res) mbp00262 (617 aa) initn: 155 init1: 155 opt: 161 Z-score: 173.1 bits: 42.2 E(): 0.00017 Smith-Waterman score: 164; 28.283% identity (32.941% ungapped) in 99 aa overlap (51-149:63-147) 30 40 50 60 70 80 mKIAA1 PLNLTLKEEQKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTE ..::. . . :...:. :...:: .: mKIAA1 SEFSLPSKYDSCQQSLGLFACHAPEPDTPARVCSQES---VTFQDIAVDFTEKEWPLLDS 40 50 60 70 80 90 100 110 120 130 140 mKIAA1 QQKALYREVMRMNYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDF .:. ::..:: :: .. :: . :: .:..::..:. .. :: . mKIAA1 SQRKLYKDVMLENYSNLSSLGYQVGKPRLISHLEQEEDLRMEERGIQQGPS--------- 90 100 110 120 130 140 150 160 170 180 190 200 mKIAA1 RTPDWASPTNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGYDLSADDL :::.. .. mKIAA1 --PDWGTTSKVKWSILLEDIFGKEASDDVRLETSHLLETSSEFSHLCEVFDIGPHLAQPV 150 160 170 180 190 >>mKIAA1611 ( 558 res) mph00982 (558 aa) initn: 189 init1: 150 opt: 160 Z-score: 172.5 bits: 41.9 E(): 0.00018 Smith-Waterman score: 160; 47.170% identity (47.170% ungapped) in 53 aa overlap (63-115:15-67) 40 50 60 70 80 90 mKIAA1 EEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRM :..::: ::.:::: : . :.::.:.:: mKIAA1 KKKPGMAVTQGQLSFSDVAIEFSQEEWECLDHAQRALHRDVMLE 10 20 30 40 100 110 120 130 140 150 mKIAA1 NYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDFRTPDWASPTNAT :: ..::: .:. . ...::. mKIAA1 NYSNLLSLGVTLPNLNAMSKLEQYKGPWTVESEAIRTRKSNGKEYIRAMFRRSYLLVHER 50 60 70 80 90 100 >>mKIAA1431 ( 833 res) mfj27243 (833 aa) initn: 156 init1: 156 opt: 159 Z-score: 169.5 bits: 41.9 E(): 0.00027 Smith-Waterman score: 159; 40.909% identity (44.262% ungapped) in 66 aa overlap (63-128:113-173) 40 50 60 70 80 90 mKIAA1 EEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRM : .::. ::.:::: :. .:..:: .:: mKIAA1 DTNFLQEINRKQEAAPTGTRHKAKSQGLVTFGDVAVVFSQEEWEWLNSEQRSLYWKVMLD 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 NYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDFRTPDWASPTNAT ::... :: . .::::. ::. . : : .. mKIAA1 NYRNLASLGLCASQPDMITSLEQGR-----DPWMMKRKMRKGQHLDLKAMQETKEFPPKD 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 SHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGYDLSADDLASKFQFSRGMRR mKIAA1 LSEETLFLAVLRKQLLPHRPKCSMVRAAWEGGAVFTTHRGLKTNSGLARDSPAQLVSAQR 200 210 220 230 240 250 >>mKIAA1862 ( 1098 res) mbg03386 (1098 aa) initn: 208 init1: 158 opt: 158 Z-score: 167.1 bits: 41.9 E(): 0.00037 Smith-Waterman score: 159; 32.258% identity (37.383% ungapped) in 124 aa overlap (59-181:25-132) 30 40 50 60 70 80 mKIAA1 EQKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYRE :: : ..:. ::.:::..: : :. .::. mKIAA1 VLRDSLGGPCWHGCSQPPRRLYPQVPISFKDLAVRFSEEEWRLLQEGQREFYRD 10 20 30 40 50 90 100 110 120 130 140 mKIAA1 VMRMNYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFAENEESDFRTPDWASP ::: ::::..:. : .. . : :.: .:.... . : mKIAA1 VMRENYETLVSVGTSELLP--LSAFLSPAEAG--------GATSGESHQDKGQKPH---- 60 70 80 90 100 150 160 170 180 190 200 mKIAA1 TNATSHFPQPQPFNSFGLR-LPQDITELPEWTEGYPFYMAMGFPGYDLSADDLASKFQFS . .:. ::: .:. : : : . :.::. : mKIAA1 LEHSSQGEQPQ--QSLHLTALVQLVKEIPEFLFGEVKGTEDYSESGSTSLDGEQTSPEVA 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RGMRRSYDAGFKLMVVEYAESTNNCQAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRG mKIAA1 VVVEACPPRGLLSSLPESPASHPSLATTPTGSSTSGGPPGDWAHGSPLPAIGTDDKPLSI 160 170 180 190 200 210 >>mKIAA1710 ( 461 res) mbg19468 (461 aa) initn: 144 init1: 144 opt: 154 Z-score: 167.0 bits: 40.6 E(): 0.00037 Smith-Waterman score: 155; 32.381% identity (39.080% ungapped) in 105 aa overlap (60-147:4-107) 30 40 50 60 70 80 mKIAA1 QKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDEEWEVLTEQQKALYREV :. :...:.:.. :::. : :. :::.: mKIAA1 FQAPVTFEDMAMYLTREEWRPLDPTQRDLYRDV 10 20 30 90 100 110 120 130 mKIAA1 MRMNYETVLSLEFPF-------PKPDMINR----------LERDEECPNSDEWRLQGVTF :. :: .:.::.: . :: .. . :: :. :.:.: .: mKIAA1 MQENYGNVVSLDFEIRSENEANPKQEFSDDVEFATMSEEPLENAEKNPGSEEAFESGDQ- 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 AENEESDFRTPDWASPTNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPG :: .:. . .:.: mKIAA1 AERPWGDLTAEEWVSYPLQQVTDLLVHKEAHAGIRYHICSQCGKAFSQISDLNRHQKTHT 100 110 120 130 140 150 621 residues in 1 query sequences 1768396 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:46:57 2006 done: Mon Mar 27 10:46:58 2006 Scan time: 0.780 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]