# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg05901.fasta.nr -Q ../query/mKIAA1045.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA1045, 403 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7920898 sequences
Expectation_n fit: rho(ln(x))= 4.9457+/-0.000183; mu= 11.8271+/- 0.010
mean_var=71.9775+/-13.857, 0's: 40 Z-trim: 43 B-trim: 0 in 0/64
Lambda= 0.151174
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|56403792|emb|CAI29683.1| hypothetical protein [ ( 409) 2504 555.2 9.6e-156
gi|114624283|ref|XP_520427.2| PREDICTED: similar t ( 400) 2491 552.4 6.7e-155
gi|55733130|emb|CAH93249.1| hypothetical protein [ ( 400) 2480 550.0 3.5e-154
gi|90082982|dbj|BAE90573.1| unnamed protein produc ( 400) 2453 544.1 2.1e-152
gi|90081882|dbj|BAE90222.1| unnamed protein produc ( 383) 2329 517.0 2.8e-144
gi|126335014|ref|XP_001378616.1| PREDICTED: hypoth ( 365) 1939 431.9 1.1e-118
gi|224090177|ref|XP_002189933.1| PREDICTED: hypoth ( 399) 1847 411.9 1.3e-112
gi|112419065|gb|AAI21920.1| Hypothetical protein M ( 409) 1753 391.4 1.9e-106
gi|13358652|dbj|BAB33051.1| hypothetical protein [ ( 239) 1404 315.1 1.1e-83
gi|118103634|ref|XP_424982.2| PREDICTED: hypotheti ( 287) 1346 302.5 7.8e-80
gi|47213319|emb|CAF89677.1| unnamed protein produc ( 413) 1312 295.2 1.7e-77
gi|122889762|emb|CAM14312.1| novel protein [Mus mu ( 255) 1196 269.8 5e-70
gi|149414264|ref|XP_001511598.1| PREDICTED: hypoth ( 184) 782 179.4 6e-43
gi|159163387|pdb|1WIL|A Chain A, Solution Structur ( 89) 539 126.1 3.1e-27
gi|210084851|gb|EEA33353.1| hypothetical protein B ( 399) 461 109.6 1.3e-21
gi|210113848|gb|EEA61612.1| hypothetical protein B ( 270) 392 94.4 3.2e-17
gi|156227316|gb|EDO48120.1| predicted protein [Nem ( 449) 365 88.7 2.8e-15
gi|210093807|gb|EEA42002.1| hypothetical protein B ( 419) 330 81.1 5.2e-13
gi|210093808|gb|EEA42003.1| hypothetical protein B ( 178) 306 75.5 1e-11
gi|190582437|gb|EDV22510.1| hypothetical protein T ( 347) 274 68.8 2.2e-09
gi|215496260|gb|EEC05900.1| hypothetical protein I ( 406) 183 49.0 0.0023
>>gi|56403792|emb|CAI29683.1| hypothetical protein [Pong (409 aa)
initn: 2504 init1: 2504 opt: 2504 Z-score: 2952.5 bits: 555.2 E(): 9.6e-156
Smith-Waterman score: 2504; 90.796% identity (98.010% similar) in 402 aa overlap (2-403:8-409)
10 20 30 40 50
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGS
::::::::::::::::::::::::::.::::::::::: ::::::::::::::
gi|564 MSHSPHPRAMGVLMSKRQTVEQVQKVSLAVSAFEDGLRDRPSIRRTGELPGSRRGTVEGS
10 20 30 40 50 60
60 70 80 90 100 110
mKIAA1 VQEVQEEKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKL
::::::::::::.. ::::::: .:::::::::::::::::::::.::::::::::::::
gi|564 VQEVQEEKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTGRFTPPAFIRPTRKL
70 80 90 100 110 120
120 130 140 150 160 170
mKIAA1 DDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAV
::::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::.
gi|564 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAA
130 140 150 160 170 180
180 190 200 210 220 230
mKIAA1 EVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAA
:: :::::::::::.::::.::::::::::::::::::::::::::::::::.:::::::
gi|564 EVMEMAHTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAA
190 200 210 220 230 240
240 250 260 270 280 290
mKIAA1 KRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLT
:::. .:::..::::::::::::::::.::..:::::::::::::: :::::::::::::
gi|564 KRGDRDRALSEEQEEQAARQFAALDPEHRGYIEWSDFLSHESLLLLQQLRPQNSLLRLLT
250 260 270 280 290 300
300 310 320 330 340 350
mKIAA1 VKERERARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAA
::::::::::::::: :::::::::..:.:::::::. :::::::::::::::::::::.
gi|564 VKERERARATFLARGSGSTISEAECRRAQHSWFCKRFPEAPSCSVSISHVGPIADSSPAS
310 320 330 340 350 360
360 370 380 390 400
mKIAA1 SSSKSQEKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
::::::.:.:::::::::.:::::::.:::.:::::::::.::::::::
gi|564 SSSKSQDKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG
370 380 390 400
>>gi|114624283|ref|XP_520427.2| PREDICTED: similar to RP (400 aa)
initn: 2491 init1: 2491 opt: 2491 Z-score: 2937.3 bits: 552.4 E(): 6.7e-155
Smith-Waterman score: 2491; 90.500% identity (97.750% similar) in 400 aa overlap (4-403:1-400)
10 20 30 40 50 60
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE
:::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
gi|114 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
::::::.. ::::::: .::::::::::::::::::::::::::::::::::::::::::
gi|114 EKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA
.::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::::
gi|114 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMA
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS
::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. .
gi|114 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER
:::..::::::::::::::::.:::.:: ::::::::::: :::::::::::::::::::
gi|114 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ
:::.::::: : :.:::::..:.::::::.. :::::::::::::::::::::.::::::
gi|114 ARAAFLARGSGITVSEAECRQAQHSWFCKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ
300 310 320 330 340 350
370 380 390 400
mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
.:.:::::::::.:::::::.:::.:::::::::.::::::::
gi|114 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG
360 370 380 390 400
>>gi|55733130|emb|CAH93249.1| hypothetical protein [Pong (400 aa)
initn: 2480 init1: 2480 opt: 2480 Z-score: 2924.3 bits: 550.0 E(): 3.5e-154
Smith-Waterman score: 2480; 90.500% identity (97.750% similar) in 400 aa overlap (4-403:1-400)
10 20 30 40 50 60
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE
:::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
gi|557 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
::::::.. ::::::: .:::::::::::::::::::::.::: ::::::::::::::::
gi|557 EKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTGRFTSPAFIRPTRKLDDDKPP
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA
.:::::::::::.::::::::::::::::::::::::::::::::::.:::::.:: :::
gi|557 EICLEPREPVVNNEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS
::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. .
gi|557 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER
:::..::::::::::::::::.::..:::::::::::::: :::::::::::::::::::
gi|557 RALSEEQEEQAARQFAALDPEHRGYIEWSDFLSHESLLLLQQLRPQNSLLRLLTVKERER
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ
::::::::: :::::::::..:.:::::::. :::::::::::::::::::::.::::::
gi|557 ARATFLARGSGSTISEAECRRAQHSWFCKRFPEAPSCSVSISHVGPIADSSPASSSSKSQ
300 310 320 330 340 350
370 380 390 400
mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
.:.:::::::::.:::::::.:::.:::::::::.::::::::
gi|557 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG
360 370 380 390 400
>>gi|90082982|dbj|BAE90573.1| unnamed protein product [M (400 aa)
initn: 2453 init1: 2453 opt: 2453 Z-score: 2892.5 bits: 544.1 E(): 2.1e-152
Smith-Waterman score: 2453; 89.250% identity (97.250% similar) in 400 aa overlap (4-403:1-400)
10 20 30 40 50 60
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE
:::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
gi|900 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
..::::.. .:::: : .::::::::::::::::::::::::::::::::::::::::::
gi|900 DREAEAGTSAVQEERSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA
.::::::::::::::::::::::::::::::::::::::::::::::.:::::.:: :::
gi|900 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS
::::::::.::::.::::::::.:::::::::::::::::::::::.::::::::::. .
gi|900 HTETGWSCHYCDNINLLLTEEEVYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER
:::..::::::::::::::::.:::.:: ::::::::::: :::::::::::::::::::
gi|900 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ
:::.::::: :::::::::..:.:::: :.. :::::::::::::::::::::.::::::
gi|900 ARAAFLARGSGSTISEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ
300 310 320 330 340 350
370 380 390 400
mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
.:.:::::::::.:::::::.:::.:::::::::.::::::::
gi|900 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG
360 370 380 390 400
>>gi|90081882|dbj|BAE90222.1| unnamed protein product [M (383 aa)
initn: 2357 init1: 2329 opt: 2329 Z-score: 2746.6 bits: 517.0 E(): 2.8e-144
Smith-Waterman score: 2329; 89.446% identity (97.098% similar) in 379 aa overlap (4-382:1-379)
10 20 30 40 50 60
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE
:::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
gi|900 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
..::::.. .:::: : .::::::::::::::::::::::::::::::::::::::::::
gi|900 DREAEAGTSAVQEERSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA
.::::::::::::::::::::::::::::::::::::::::::::::.:::::.:: :::
gi|900 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS
::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. .
gi|900 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER
:::..::::::::::::::::.:::.:: ::::::::::: :::::::::::::::::::
gi|900 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ
:::.::::: :::::::::..:.:::: :.. :::::::::::::::::::::.::::::
gi|900 ARAAFLARGSGSTISEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ
300 310 320 330 340 350
370 380 390 400
mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
.:.:::::::::.:::::::.:
gi|900 DKTLLPTEQESRFVDWPTFLQEKPPG
360 370 380
>>gi|126335014|ref|XP_001378616.1| PREDICTED: hypothetic (365 aa)
initn: 1903 init1: 1733 opt: 1939 Z-score: 2287.2 bits: 431.9 E(): 1.1e-118
Smith-Waterman score: 1939; 78.889% identity (90.833% similar) in 360 aa overlap (46-403:6-365)
20 30 40 50 60 70
mKIAA1 QVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQEEKEAEASAPVVQEES
:.: ::: .::::: : :..: : :::.
gi|126 MGVLMSKRQTVEQVQKEVQEEDELETAAAVPQEEN
10 20 30
80 90 100 110 120 130
mKIAA1 SINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPPDICLEPREPVVNDEM
:.::::::::::::::::::::...:::::::::: :.: :::: :::::::: :..:::
gi|126 SVNRAAWERLRDGRGVEPEEFDHANRFTPPAFIRPIRELHDDKPLDICLEPRESVISDEM
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA1 CDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNLN
:..:::::::::::::.::::::::::::::::::::.::::::::::::::::::.:::
gi|126 CEICEVWTAESLFPCRICTRVFHDGCLRRMGYLQGDSTVEVTEMAHTETGWSCYYCNNLN
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA1 LLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQF
::::::::::: :.::.::.:::::::::::.:::::::.:: : :::..::::.::.::
gi|126 LLLTEEEMYSLMENFQQCKIIPDCSLTLEDFLRYRHQAARRGGSERALSEEQEERAAQQF
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA1 AALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERERARATFLARGRGSTIS
::::::.:::::: :::::::: :: :::::::::::::::::::::..:::: :. ::
gi|126 AALDPEHRGHVEWPDFLSHESLQLLQQLRPQNSLLRLLTVKERERARTAFLARDTGGYIS
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA1 EAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSS-KSQEKALLPTEQES-RY
:.::..:.:.:: :: .::::.:::::::::..::::.::: :: :: : .::: :
gi|126 ETECRRAQHTWFRKRPLDAPSCNVSISHVGPISESSPASSSSAKSPEKPLQTAEQEEPRS
280 290 300 310 320 330
380 390 400
mKIAA1 VDWPTFLRENVIYILAARPNSGAIHLKPPG
:::::::.:::::::::::::.:::::: :
gi|126 VDWPTFLKENVIYILAARPNSAAIHLKPLG
340 350 360
>>gi|224090177|ref|XP_002189933.1| PREDICTED: hypothetic (399 aa)
initn: 1672 init1: 973 opt: 1847 Z-score: 2178.2 bits: 411.9 E(): 1.3e-112
Smith-Waterman score: 1847; 68.080% identity (85.287% similar) in 401 aa overlap (4-401:1-397)
10 20 30 40 50 60
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE
::::::.:::::.::::::::::::::::..:: :: .: .:.::.: :::::
gi|224 MGVLMSRRQTVERVQKVSLAVSAFKDGLREQPSTRRRAEAGTARQGTLE---QEVQE
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP
.: ..: :::: ..:::::::::::::::::::..:::::::::: :.: ::. :
gi|224 GEEEALAGPSQPEESSASKAAWERLRDGRGVEPEEFDRANRFTPPAFIRPKRELHDDESP
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA
:: :: :: ..:::::..:::::::::::::.: ::.:::::::::::: :::::::: :
gi|224 DISLEQREQILNDEMCEICEVWTAESLFPCRICHRVYHDGCLRRMGYLQKDSAVEVTETA
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS
:::::::::::::::::::::::::: ::.. ::.::. :::.::..:.::. :. .
gi|224 HTETGWSCYYCDNLNLLLTEEEMYSLMETLRNCKIIPESCLTLDDFLHYKHQVHKQ-QFE
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER
:.. . :::::: :: ::::...::.::.:::::::. :: ..::::.::::::.:::::
gi|224 RTMPEAQEEQAALQFNALDPDKKGHIEWQDFLSHESIQLLQKIRPQNALLRLLTAKERER
240 250 260 270 280 290
310 320 330 340 350
mKIAA1 ARATFLA--RGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAAS-SS
::..::: . . . :.:.::..:::.:: :. : ::.:::::::::...:::.: .:
gi|224 ARTAFLALDQDHDGFIGESECRQARHTWFRKHQKEMLSCNVSISHVGPISEGSPASSRNS
300 310 320 330 340 350
360 370 380 390 400
mKIAA1 KSQEKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
:: :: : :.:: .::: :::::: :::::::::.:.::.:
gi|224 KSPEKILPATKQEETSIDWPGFLRENVAYILAARPNSAALHLQPLA
360 370 380 390
>>gi|112419065|gb|AAI21920.1| Hypothetical protein MGC14 (409 aa)
initn: 1481 init1: 941 opt: 1753 Z-score: 2067.3 bits: 391.4 E(): 1.9e-106
Smith-Waterman score: 1753; 64.390% identity (84.878% similar) in 410 aa overlap (4-401:1-407)
10 20 30 40 50
mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGS-RRGTVEGSVQEV-
::::::::::::::::::.:::::::::.::: .: .: : :.:. ...:
gi|112 MGVLMSKRQTVEQVQKVSIAVSAFKDGLKDRPPSKRKSE--GCIRKGSKADVLDQVL
10 20 30 40 50
60 70 80 90 100 110
mKIAA1 QEEKEAEASAPVV------QEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTR
.:::. .: : ..:. ::::::::::::::::::::...::::::::::: :
gi|112 EEEKDESGSNPGSPCQSQPRQENPINRAAWERLRDGRGVEPEEFNKNSRFTPPAFIRPKR
60 70 80 90 100 110
120 130 140 150 160 170
mKIAA1 KLDDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDS
:.::.: .: :: :: . :::::..:::::::::.:::.:.::::::::::::::..:.
gi|112 ALNDDEPLEISLEQREEIPNDEMCEICEVWTAESLYPCRICSRVFHDGCLRRMGYLRNDN
120 130 140 150 160 170
180 190 200 210 220 230
mKIAA1 AVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQ
..:::::::::::::::::::::::::::::::: :::..:::::.: :::.::..:.:
gi|112 TLEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLMETFSHCKVIPECPLTLDDFLHYKHL
180 190 200 210 220 230
240 250 260 270 280 290
mKIAA1 AAKRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRL
. .: . . :.:. ::::. ::...:::..:.:::.:::::::. :. .:: .::::::
gi|112 VNRRLQE-KQLSDDLEEQATLQFSSMDPEKKGQVEWGDFLSHESICLMQKLRTENSLLRL
240 250 260 270 280 290
300 310 320 330 340 350
mKIAA1 LTVKERERARATFLA--RGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADS
::.:::::::::::. . ..:. .::..:.:.:: :. :: ::.::::::::...:
gi|112 LTAKERERARATFLSLDQDNDKVINGSECRRAQHGWFRKQSKEAVSCNVSISHVGPMSES
300 310 320 330 340 350
360 370 380 390 400
mKIAA1 SPAASSS-KSQEKALLPT-EQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
:::.:.: :::.:. : . .:.: :.: :::.::.:.:::::::: ::::::
gi|112 SPASSTSGKSQDKTPLTSYPDEGRQVSWDTFLKENAIFILAARPNSPAIHLKPSV
360 370 380 390 400
>>gi|13358652|dbj|BAB33051.1| hypothetical protein [Maca (239 aa)
initn: 1404 init1: 1404 opt: 1404 Z-score: 1659.0 bits: 315.1 E(): 1.1e-83
Smith-Waterman score: 1404; 85.774% identity (96.234% similar) in 239 aa overlap (165-403:1-239)
140 150 160 170 180 190
mKIAA1 MCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNL
:::.:::::.:: : :::::::::.::::.
gi|133 MGYIQGDSAAEVMETAHTETGWSCHYCDNI
10 20 30
200 210 220 230 240 250
mKIAA1 NLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQ
::::::::::::::::::::::::::::::::.::::::::::. .:::..:::::::::
gi|133 NLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRDRALSEEQEEQAARQ
40 50 60 70 80 90
260 270 280 290 300 310
mKIAA1 FAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERERARATFLARGRGSTI
:::::::.:::.:: ::::::.:::: ::::::::::::::::::::::.::::: :: :
gi|133 FAALDPEHRGHIEWPDFLSHETLLLLQQLRPQNSLLRLLTVKERERARAAFLARGSGSII
100 110 120 130 140 150
320 330 340 350 360 370
mKIAA1 SEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQEKALLPTEQESRYV
:::::..:.:::: :.. :::::::::::::::::::::.::::::.:.:::::::::.:
gi|133 SEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQDKTLLPTEQESRFV
160 170 180 190 200 210
380 390 400
mKIAA1 DWPTFLRENVIYILAARPNSGAIHLKPPG
::::::.:::.:::::::::.::::::::
gi|133 DWPTFLQENVLYILAARPNSAAIHLKPPG
220 230
>>gi|118103634|ref|XP_424982.2| PREDICTED: hypothetical (287 aa)
initn: 1309 init1: 637 opt: 1346 Z-score: 1589.6 bits: 302.5 E(): 7.8e-80
Smith-Waterman score: 1346; 71.014% identity (89.130% similar) in 276 aa overlap (130-401:11-285)
100 110 120 130 140 150
mKIAA1 SRFTPPAFIRPTRKLDDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHD
:.:::::..:::::::::::::::.:::::
gi|118 MVLSYSIAPQVLNDEMCEICEVWTAESLFPCRVCNRVFHD
10 20 30 40
160 170 180 190 200 210
mKIAA1 GCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDC
::::::::::.:::::::: ::::::::::::::::::::::::::: ::...::.::.
gi|118 GCLRRMGYLQNDSAVEVTETAHTETGWSCYYCDNLNLLLTEEEMYSLMETLRQCKIIPET
50 60 70 80 90 100
220 230 240 250 260 270
mKIAA1 SLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLL
::::.::..:.: . :. . : . . :::.:. ::.::::...::.:: :::::::. :
gi|118 SLTLDDFLHYKHLVHKQ-QFERPMEEAQEERATLQFSALDPDKKGHIEWPDFLSHESIQL
110 120 130 140 150
280 290 300 310 320 330
mKIAA1 LLQLRPQNSLLRLLTVKERERARATFLARGRGST--ISEAECHHARHSWFCKRLTEAPSC
: .::: ::::::::::::::::::::: . .. :.:.:::.:.:.:: :. :.:::
gi|118 LQKLRPPNSLLRLLTVKERERARATFLALDQDGSGFIGEGECHKAQHAWFRKHQKETPSC
160 170 180 190 200 210
340 350 360 370 380 390
mKIAA1 SVSISHVGPIADSSPAASSS-KSQEKALLPTEQE-SRYVDWPTFLRENVIYILAARPNSG
.::::::::...::::.:.: :::::.:: .::: .: .::: :::::: :::::::::.
gi|118 NVSISHVGPMSESSPASSGSVKSQEKTLLASEQEEARPIDWPRFLRENVAYILAARPNSA
220 230 240 250 260 270
400
mKIAA1 AIHLKPPG
::::.:
gi|118 AIHLQPLA
280
403 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Tue Mar 17 17:42:40 2009 done: Tue Mar 17 17:49:07 2009
Total Scan time: 878.520 Total Display time: 0.090
Function used was FASTA [version 34.26.5 April 26, 2007]