# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg05901.fasta.nr -Q ../query/mKIAA1045.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1045, 403 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920898 sequences Expectation_n fit: rho(ln(x))= 4.9457+/-0.000183; mu= 11.8271+/- 0.010 mean_var=71.9775+/-13.857, 0's: 40 Z-trim: 43 B-trim: 0 in 0/64 Lambda= 0.151174 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|56403792|emb|CAI29683.1| hypothetical protein [ ( 409) 2504 555.2 9.6e-156 gi|114624283|ref|XP_520427.2| PREDICTED: similar t ( 400) 2491 552.4 6.7e-155 gi|55733130|emb|CAH93249.1| hypothetical protein [ ( 400) 2480 550.0 3.5e-154 gi|90082982|dbj|BAE90573.1| unnamed protein produc ( 400) 2453 544.1 2.1e-152 gi|90081882|dbj|BAE90222.1| unnamed protein produc ( 383) 2329 517.0 2.8e-144 gi|126335014|ref|XP_001378616.1| PREDICTED: hypoth ( 365) 1939 431.9 1.1e-118 gi|224090177|ref|XP_002189933.1| PREDICTED: hypoth ( 399) 1847 411.9 1.3e-112 gi|112419065|gb|AAI21920.1| Hypothetical protein M ( 409) 1753 391.4 1.9e-106 gi|13358652|dbj|BAB33051.1| hypothetical protein [ ( 239) 1404 315.1 1.1e-83 gi|118103634|ref|XP_424982.2| PREDICTED: hypotheti ( 287) 1346 302.5 7.8e-80 gi|47213319|emb|CAF89677.1| unnamed protein produc ( 413) 1312 295.2 1.7e-77 gi|122889762|emb|CAM14312.1| novel protein [Mus mu ( 255) 1196 269.8 5e-70 gi|149414264|ref|XP_001511598.1| PREDICTED: hypoth ( 184) 782 179.4 6e-43 gi|159163387|pdb|1WIL|A Chain A, Solution Structur ( 89) 539 126.1 3.1e-27 gi|210084851|gb|EEA33353.1| hypothetical protein B ( 399) 461 109.6 1.3e-21 gi|210113848|gb|EEA61612.1| hypothetical protein B ( 270) 392 94.4 3.2e-17 gi|156227316|gb|EDO48120.1| predicted protein [Nem ( 449) 365 88.7 2.8e-15 gi|210093807|gb|EEA42002.1| hypothetical protein B ( 419) 330 81.1 5.2e-13 gi|210093808|gb|EEA42003.1| hypothetical protein B ( 178) 306 75.5 1e-11 gi|190582437|gb|EDV22510.1| hypothetical protein T ( 347) 274 68.8 2.2e-09 gi|215496260|gb|EEC05900.1| hypothetical protein I ( 406) 183 49.0 0.0023 >>gi|56403792|emb|CAI29683.1| hypothetical protein [Pong (409 aa) initn: 2504 init1: 2504 opt: 2504 Z-score: 2952.5 bits: 555.2 E(): 9.6e-156 Smith-Waterman score: 2504; 90.796% identity (98.010% similar) in 402 aa overlap (2-403:8-409) 10 20 30 40 50 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGS ::::::::::::::::::::::::::.::::::::::: :::::::::::::: gi|564 MSHSPHPRAMGVLMSKRQTVEQVQKVSLAVSAFEDGLRDRPSIRRTGELPGSRRGTVEGS 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 VQEVQEEKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKL ::::::::::::.. ::::::: .:::::::::::::::::::::.:::::::::::::: gi|564 VQEVQEEKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTGRFTPPAFIRPTRKL 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 DDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAV ::::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::. gi|564 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 EVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAA :: :::::::::::.::::.::::::::::::::::::::::::::::::::.::::::: gi|564 EVMEMAHTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAA 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 KRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLT :::. .:::..::::::::::::::::.::..:::::::::::::: ::::::::::::: gi|564 KRGDRDRALSEEQEEQAARQFAALDPEHRGYIEWSDFLSHESLLLLQQLRPQNSLLRLLT 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 VKERERARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAA ::::::::::::::: :::::::::..:.:::::::. :::::::::::::::::::::. gi|564 VKERERARATFLARGSGSTISEAECRRAQHSWFCKRFPEAPSCSVSISHVGPIADSSPAS 310 320 330 340 350 360 360 370 380 390 400 mKIAA1 SSSKSQEKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG ::::::.:.:::::::::.:::::::.:::.:::::::::.:::::::: gi|564 SSSKSQDKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG 370 380 390 400 >>gi|114624283|ref|XP_520427.2| PREDICTED: similar to RP (400 aa) initn: 2491 init1: 2491 opt: 2491 Z-score: 2937.3 bits: 552.4 E(): 6.7e-155 Smith-Waterman score: 2491; 90.500% identity (97.750% similar) in 400 aa overlap (4-403:1-400) 10 20 30 40 50 60 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE :::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|114 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP ::::::.. ::::::: .:::::::::::::::::::::::::::::::::::::::::: gi|114 EKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA .::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::::: gi|114 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS ::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. . gi|114 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER :::..::::::::::::::::.:::.:: ::::::::::: ::::::::::::::::::: gi|114 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ :::.::::: : :.:::::..:.::::::.. :::::::::::::::::::::.:::::: gi|114 ARAAFLARGSGITVSEAECRQAQHSWFCKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ 300 310 320 330 340 350 370 380 390 400 mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG .:.:::::::::.:::::::.:::.:::::::::.:::::::: gi|114 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG 360 370 380 390 400 >>gi|55733130|emb|CAH93249.1| hypothetical protein [Pong (400 aa) initn: 2480 init1: 2480 opt: 2480 Z-score: 2924.3 bits: 550.0 E(): 3.5e-154 Smith-Waterman score: 2480; 90.500% identity (97.750% similar) in 400 aa overlap (4-403:1-400) 10 20 30 40 50 60 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE :::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|557 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP ::::::.. ::::::: .:::::::::::::::::::::.::: :::::::::::::::: gi|557 EKEAEAGTSVVQEESSAGRAAWERLRDGRGVEPEEFDRTGRFTSPAFIRPTRKLDDDKPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA .:::::::::::.::::::::::::::::::::::::::::::::::.:::::.:: ::: gi|557 EICLEPREPVVNNEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS ::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. . gi|557 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER :::..::::::::::::::::.::..:::::::::::::: ::::::::::::::::::: gi|557 RALSEEQEEQAARQFAALDPEHRGYIEWSDFLSHESLLLLQQLRPQNSLLRLLTVKERER 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ ::::::::: :::::::::..:.:::::::. :::::::::::::::::::::.:::::: gi|557 ARATFLARGSGSTISEAECRRAQHSWFCKRFPEAPSCSVSISHVGPIADSSPASSSSKSQ 300 310 320 330 340 350 370 380 390 400 mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG .:.:::::::::.:::::::.:::.:::::::::.:::::::: gi|557 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG 360 370 380 390 400 >>gi|90082982|dbj|BAE90573.1| unnamed protein product [M (400 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 2892.5 bits: 544.1 E(): 2.1e-152 Smith-Waterman score: 2453; 89.250% identity (97.250% similar) in 400 aa overlap (4-403:1-400) 10 20 30 40 50 60 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE :::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|900 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP ..::::.. .:::: : .:::::::::::::::::::::::::::::::::::::::::: gi|900 DREAEAGTSAVQEERSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA .::::::::::::::::::::::::::::::::::::::::::::::.:::::.:: ::: gi|900 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS ::::::::.::::.::::::::.:::::::::::::::::::::::.::::::::::. . gi|900 HTETGWSCHYCDNINLLLTEEEVYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER :::..::::::::::::::::.:::.:: ::::::::::: ::::::::::::::::::: gi|900 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ :::.::::: :::::::::..:.:::: :.. :::::::::::::::::::::.:::::: gi|900 ARAAFLARGSGSTISEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ 300 310 320 330 340 350 370 380 390 400 mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG .:.:::::::::.:::::::.:::.:::::::::.:::::::: gi|900 DKTLLPTEQESRFVDWPTFLQENVLYILAARPNSAAIHLKPPG 360 370 380 390 400 >>gi|90081882|dbj|BAE90222.1| unnamed protein product [M (383 aa) initn: 2357 init1: 2329 opt: 2329 Z-score: 2746.6 bits: 517.0 E(): 2.8e-144 Smith-Waterman score: 2329; 89.446% identity (97.098% similar) in 379 aa overlap (4-382:1-379) 10 20 30 40 50 60 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE :::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|900 MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSRRGTVEGSVQEVQE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP ..::::.. .:::: : .:::::::::::::::::::::::::::::::::::::::::: gi|900 DREAEAGTSAVQEERSAGRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA .::::::::::::::::::::::::::::::::::::::::::::::.:::::.:: ::: gi|900 EICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVMEMA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS ::::::::.::::.::::::::::::::::::::::::::::::::.::::::::::. . gi|900 HTETGWSCHYCDNINLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRD 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER :::..::::::::::::::::.:::.:: ::::::::::: ::::::::::::::::::: gi|900 RALSEEQEEQAARQFAALDPEHRGHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERER 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 ARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQ :::.::::: :::::::::..:.:::: :.. :::::::::::::::::::::.:::::: gi|900 ARAAFLARGSGSTISEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQ 300 310 320 330 340 350 370 380 390 400 mKIAA1 EKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG .:.:::::::::.:::::::.: gi|900 DKTLLPTEQESRFVDWPTFLQEKPPG 360 370 380 >>gi|126335014|ref|XP_001378616.1| PREDICTED: hypothetic (365 aa) initn: 1903 init1: 1733 opt: 1939 Z-score: 2287.2 bits: 431.9 E(): 1.1e-118 Smith-Waterman score: 1939; 78.889% identity (90.833% similar) in 360 aa overlap (46-403:6-365) 20 30 40 50 60 70 mKIAA1 QVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQEEKEAEASAPVVQEES :.: ::: .::::: : :..: : :::. gi|126 MGVLMSKRQTVEQVQKEVQEEDELETAAAVPQEEN 10 20 30 80 90 100 110 120 130 mKIAA1 SINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPPDICLEPREPVVNDEM :.::::::::::::::::::::...:::::::::: :.: :::: :::::::: :..::: gi|126 SVNRAAWERLRDGRGVEPEEFDHANRFTPPAFIRPIRELHDDKPLDICLEPRESVISDEM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 CDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNLN :..:::::::::::::.::::::::::::::::::::.::::::::::::::::::.::: gi|126 CEICEVWTAESLFPCRICTRVFHDGCLRRMGYLQGDSTVEVTEMAHTETGWSCYYCNNLN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQF ::::::::::: :.::.::.:::::::::::.:::::::.:: : :::..::::.::.:: gi|126 LLLTEEEMYSLMENFQQCKIIPDCSLTLEDFLRYRHQAARRGGSERALSEEQEERAAQQF 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 AALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERERARATFLARGRGSTIS ::::::.:::::: :::::::: :: :::::::::::::::::::::..:::: :. :: gi|126 AALDPEHRGHVEWPDFLSHESLQLLQQLRPQNSLLRLLTVKERERARTAFLARDTGGYIS 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 EAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSS-KSQEKALLPTEQES-RY :.::..:.:.:: :: .::::.:::::::::..::::.::: :: :: : .::: : gi|126 ETECRRAQHTWFRKRPLDAPSCNVSISHVGPISESSPASSSSAKSPEKPLQTAEQEEPRS 280 290 300 310 320 330 380 390 400 mKIAA1 VDWPTFLRENVIYILAARPNSGAIHLKPPG :::::::.:::::::::::::.:::::: : gi|126 VDWPTFLKENVIYILAARPNSAAIHLKPLG 340 350 360 >>gi|224090177|ref|XP_002189933.1| PREDICTED: hypothetic (399 aa) initn: 1672 init1: 973 opt: 1847 Z-score: 2178.2 bits: 411.9 E(): 1.3e-112 Smith-Waterman score: 1847; 68.080% identity (85.287% similar) in 401 aa overlap (4-401:1-397) 10 20 30 40 50 60 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQE ::::::.:::::.::::::::::::::::..:: :: .: .:.::.: ::::: gi|224 MGVLMSRRQTVERVQKVSLAVSAFKDGLREQPSTRRRAEAGTARQGTLE---QEVQE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EKEAEASAPVVQEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPP .: ..: :::: ..:::::::::::::::::::..:::::::::: :.: ::. : gi|224 GEEEALAGPSQPEESSASKAAWERLRDGRGVEPEEFDRANRFTPPAFIRPKRELHDDESP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 DICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMA :: :: :: ..:::::..:::::::::::::.: ::.:::::::::::: :::::::: : gi|224 DISLEQREQILNDEMCEICEVWTAESLFPCRICHRVYHDGCLRRMGYLQKDSAVEVTETA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 HTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESS :::::::::::::::::::::::::: ::.. ::.::. :::.::..:.::. :. . gi|224 HTETGWSCYYCDNLNLLLTEEEMYSLMETLRNCKIIPESCLTLDDFLHYKHQVHKQ-QFE 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 RALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERER :.. . :::::: :: ::::...::.::.:::::::. :: ..::::.::::::.::::: gi|224 RTMPEAQEEQAALQFNALDPDKKGHIEWQDFLSHESIQLLQKIRPQNALLRLLTAKERER 240 250 260 270 280 290 310 320 330 340 350 mKIAA1 ARATFLA--RGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAAS-SS ::..::: . . . :.:.::..:::.:: :. : ::.:::::::::...:::.: .: gi|224 ARTAFLALDQDHDGFIGESECRQARHTWFRKHQKEMLSCNVSISHVGPISEGSPASSRNS 300 310 320 330 340 350 360 370 380 390 400 mKIAA1 KSQEKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG :: :: : :.:: .::: :::::: :::::::::.:.::.: gi|224 KSPEKILPATKQEETSIDWPGFLRENVAYILAARPNSAALHLQPLA 360 370 380 390 >>gi|112419065|gb|AAI21920.1| Hypothetical protein MGC14 (409 aa) initn: 1481 init1: 941 opt: 1753 Z-score: 2067.3 bits: 391.4 E(): 1.9e-106 Smith-Waterman score: 1753; 64.390% identity (84.878% similar) in 410 aa overlap (4-401:1-407) 10 20 30 40 50 mKIAA1 RRAMGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGS-RRGTVEGSVQEV- ::::::::::::::::::.:::::::::.::: .: .: : :.:. ...: gi|112 MGVLMSKRQTVEQVQKVSIAVSAFKDGLKDRPPSKRKSE--GCIRKGSKADVLDQVL 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 QEEKEAEASAPVV------QEESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTR .:::. .: : ..:. ::::::::::::::::::::...::::::::::: : gi|112 EEEKDESGSNPGSPCQSQPRQENPINRAAWERLRDGRGVEPEEFNKNSRFTPPAFIRPKR 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 KLDDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDS :.::.: .: :: :: . :::::..:::::::::.:::.:.::::::::::::::..:. gi|112 ALNDDEPLEISLEQREEIPNDEMCEICEVWTAESLYPCRICSRVFHDGCLRRMGYLRNDN 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 AVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQ ..:::::::::::::::::::::::::::::::: :::..:::::.: :::.::..:.: gi|112 TLEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLMETFSHCKVIPECPLTLDDFLHYKHL 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 AAKRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRL . .: . . :.:. ::::. ::...:::..:.:::.:::::::. :. .:: .:::::: gi|112 VNRRLQE-KQLSDDLEEQATLQFSSMDPEKKGQVEWGDFLSHESICLMQKLRTENSLLRL 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 LTVKERERARATFLA--RGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADS ::.:::::::::::. . ..:. .::..:.:.:: :. :: ::.::::::::...: gi|112 LTAKERERARATFLSLDQDNDKVINGSECRRAQHGWFRKQSKEAVSCNVSISHVGPMSES 300 310 320 330 340 350 360 370 380 390 400 mKIAA1 SPAASSS-KSQEKALLPT-EQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG :::.:.: :::.:. : . .:.: :.: :::.::.:.:::::::: :::::: gi|112 SPASSTSGKSQDKTPLTSYPDEGRQVSWDTFLKENAIFILAARPNSPAIHLKPSV 360 370 380 390 400 >>gi|13358652|dbj|BAB33051.1| hypothetical protein [Maca (239 aa) initn: 1404 init1: 1404 opt: 1404 Z-score: 1659.0 bits: 315.1 E(): 1.1e-83 Smith-Waterman score: 1404; 85.774% identity (96.234% similar) in 239 aa overlap (165-403:1-239) 140 150 160 170 180 190 mKIAA1 MCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNL :::.:::::.:: : :::::::::.::::. gi|133 MGYIQGDSAAEVMETAHTETGWSCHYCDNI 10 20 30 200 210 220 230 240 250 mKIAA1 NLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQ ::::::::::::::::::::::::::::::::.::::::::::. .:::..::::::::: gi|133 NLLLTEEEMYSLTETFQRCKVIPDCSLTLEDFLRYRHQAAKRGDRDRALSEEQEEQAARQ 40 50 60 70 80 90 260 270 280 290 300 310 mKIAA1 FAALDPEQRGHVEWSDFLSHESLLLLLQLRPQNSLLRLLTVKERERARATFLARGRGSTI :::::::.:::.:: ::::::.:::: ::::::::::::::::::::::.::::: :: : gi|133 FAALDPEHRGHIEWPDFLSHETLLLLQQLRPQNSLLRLLTVKERERARAAFLARGSGSII 100 110 120 130 140 150 320 330 340 350 360 370 mKIAA1 SEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPAASSSKSQEKALLPTEQESRYV :::::..:.:::: :.. :::::::::::::::::::::.::::::.:.:::::::::.: gi|133 SEAECRRAQHSWFYKQFPEAPSCSVSISHVGPIADSSPASSSSKSQDKTLLPTEQESRFV 160 170 180 190 200 210 380 390 400 mKIAA1 DWPTFLRENVIYILAARPNSGAIHLKPPG ::::::.:::.:::::::::.:::::::: gi|133 DWPTFLQENVLYILAARPNSAAIHLKPPG 220 230 >>gi|118103634|ref|XP_424982.2| PREDICTED: hypothetical (287 aa) initn: 1309 init1: 637 opt: 1346 Z-score: 1589.6 bits: 302.5 E(): 7.8e-80 Smith-Waterman score: 1346; 71.014% identity (89.130% similar) in 276 aa overlap (130-401:11-285) 100 110 120 130 140 150 mKIAA1 SRFTPPAFIRPTRKLDDDKPPDICLEPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHD :.:::::..:::::::::::::::.::::: gi|118 MVLSYSIAPQVLNDEMCEICEVWTAESLFPCRVCNRVFHD 10 20 30 40 160 170 180 190 200 210 mKIAA1 GCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRCKVIPDC ::::::::::.:::::::: ::::::::::::::::::::::::::: ::...::.::. gi|118 GCLRRMGYLQNDSAVEVTETAHTETGWSCYYCDNLNLLLTEEEMYSLMETLRQCKIIPET 50 60 70 80 90 100 220 230 240 250 260 270 mKIAA1 SLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLL ::::.::..:.: . :. . : . . :::.:. ::.::::...::.:: :::::::. : gi|118 SLTLDDFLHYKHLVHKQ-QFERPMEEAQEERATLQFSALDPDKKGHIEWPDFLSHESIQL 110 120 130 140 150 280 290 300 310 320 330 mKIAA1 LLQLRPQNSLLRLLTVKERERARATFLARGRGST--ISEAECHHARHSWFCKRLTEAPSC : .::: ::::::::::::::::::::: . .. :.:.:::.:.:.:: :. :.::: gi|118 LQKLRPPNSLLRLLTVKERERARATFLALDQDGSGFIGEGECHKAQHAWFRKHQKETPSC 160 170 180 190 200 210 340 350 360 370 380 390 mKIAA1 SVSISHVGPIADSSPAASSS-KSQEKALLPTEQE-SRYVDWPTFLRENVIYILAARPNSG .::::::::...::::.:.: :::::.:: .::: .: .::: :::::: :::::::::. gi|118 NVSISHVGPMSESSPASSGSVKSQEKTLLASEQEEARPIDWPRFLRENVAYILAARPNSA 220 230 240 250 260 270 400 mKIAA1 AIHLKPPG ::::.: gi|118 AIHLQPLA 280 403 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 17:42:40 2009 done: Tue Mar 17 17:49:07 2009 Total Scan time: 878.520 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]