FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0099.ptfa, 1218 aa vs ./tmplib.26680 library 1767799 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.5168+/-0.00648; mu= 2.5024+/- 0.429 mean_var=314.5609+/-73.224, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.0723 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0235 ( 969 res) mbh00517 ( 969) 2561 282 3.7e-76 mKIAA0020 ( 496 res) mtk00084 ( 496) 250 40 0.00094 mKIAA0200 ( 1045 res) mpf00402 (1045) 225 38 0.0091 >>mKIAA0235 ( 969 res) mbh00517 (969 aa) initn: 3301 init1: 1469 opt: 2561 Z-score: 1459.5 bits: 281.8 E(): 3.7e-76 Smith-Waterman score: 4731; 71.887% identity (79.874% ungapped) in 1060 aa overlap (174-1218:1-969) 150 160 170 180 190 200 mKIAA0 NIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGD-QWR :::: ::::: :.:.::: ::::::: .:: mKIAA0 QLLPTKKFWEPDDSTKDGQKGIFLGDDEWR 10 20 30 210 220 230 240 250 260 mKIAA0 DSAWGTSDHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGD- ..::::: ::.::::::::: ::::: :::::..:::::::::::::::::::::::.: mKIAA0 ETAWGTSHHSMSQPIMVQRRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADK 40 50 60 70 80 90 270 280 290 300 310 mKIAA0 --SCLRKGGFGPRDADSDENDKGEKKNKGT-FDGDKLGDLKEEGDVMDKTNGLPVQNGID : .::: :: :::..: .::..:.:.. :. :. :::.. : .: :: . ::.: mKIAA0 LDSRFRKGTFGTRDAETDGPEKGDQKGKASPFEEDQNRDLKQD-DEDSKINGRGLPNGMD 100 110 120 130 140 320 330 340 350 360 370 mKIAA0 ADVKDFSRTPGNCQNSANEV-DLLGPNQNGSEGLAQLTSTNGAKP-VEDFSNMESQSVPL :: :::.::::. : : .:: . :::. : :::. : . .. :: ::.::: :.:. : mKIAA0 ADCKDFNRTPGSRQASPTEVVERLGPSTNPPEGLGPLPNPTANKPLVEEFSNPETQN--L 150 160 170 180 190 200 380 390 400 410 420 430 mKIAA0 DPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQY : :..::.. ::::: :.:::.::..::::::::::::::::: .::.:::::::::::: mKIAA0 DAMDQVGLDSLQFDYPGNQVPMDSSGATVGLFDYNSQQQLFQRTSALTVQQLTAAQQQQY 210 220 230 240 250 260 440 450 460 470 480 mKIAA0 ALAAAHQPHIAG-----LAPAAFVPNPYIISAAPPGTDPYTA-GLAAAATL-GPAVVPHQ :::::.:::::: ::::::::::::::::::::::::: :::::::: :::::: : mKIAA0 ALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQ 270 280 290 300 310 320 490 500 510 520 530 540 mKIAA0 YYGVTPWGVYPASLFQQQAAAAAAATNSATQQSAPQAQQGQQQVLRGGASQRPLTPNQNQ :::: :::::::.:::::::::: .:.:.::.: ::: ::::::: ::.:::.::.:.: mKIAA0 YYGV-PWGVYPANLFQQQAAAAA--SNTANQQAASQAQPGQQQVLRPGAGQRPITPSQGQ 330 340 350 360 370 380 550 560 570 580 590 600 mKIAA0 QGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPV ::::.. :.::: : .:::::.:::::::: ::::.:::::::::::. :::.:::::: mKIAA0 QGQQAESLAAAA--NPTLAFGQSLAAGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPV 390 400 410 420 430 440 610 620 630 640 650 660 mKIAA0 RLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQ-PSN ::.::.::.:::.::::: ::::.:.:.:..:.:.::: :::.::: :: : ::: ::. mKIAA0 RLIAPTPVLISSTAAQAA--AAAAAAGGTANSLTGSTNGLFRPIGTQPPQQQQQQQQPST 450 460 470 480 490 500 670 680 690 700 710 720 mKIAA0 NLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVAN :: :.::::..::...::::::::.: .::...::::::.:::::..::::.:::.. mKIAA0 NLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSS--- 510 520 530 540 550 730 740 750 760 770 780 mKIAA0 SNTGSGSRRDSLTGSSDLYKRTSSSLAPIGHSFYSSLSYSSSPGPVGMPLPSQGPGHSQT mKIAA0 ------------------------------------------------------------ 790 800 810 820 830 840 mKIAA0 PPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLR ::::::::::::::::::::::::::.::::: :: :: :::: mKIAA0 ----------------GGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLR 560 570 580 590 600 850 860 870 880 890 900 mKIAA0 YGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAER :. ::.::::::::::::::::.::::::.. :::.::::::::::::: :::::: ::: mKIAA0 YNRSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAER 610 620 630 640 650 660 910 920 930 940 950 960 mKIAA0 QLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVI :.:::::::::::::.:::::::::::::::: .:::::: ::::::: ::::::::::: mKIAA0 QIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVI 670 680 690 700 710 720 970 980 990 1000 1010 1020 mKIAA0 QKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQ ::::: : :::: .:::.::::::::::::::::::::::::::::::::::::::::: mKIAA0 QKALESISSDQQ--SEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQ 730 740 750 760 770 1030 1040 1050 1060 1070 1080 mKIAA0 VFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE ::.:::::::::::::::::: .:::::::::::::::::::::::::::::::::::: mKIAA0 VFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE 780 790 800 810 820 830 1090 1100 1110 1120 1130 1140 mKIAA0 DKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMM ::::::.::::.::.::::::::::::::::::::.:::.:::::: .:::::::::::: mKIAA0 DKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMM 840 850 860 870 880 890 1150 1160 1170 1180 1190 1200 mKIAA0 KDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLG ::::::::::::::.:::.::::.::::::::.:::::::::::::::::::.::. ::: mKIAA0 KDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLG 900 910 920 930 940 950 1210 mKIAA0 PICGPPNGII :: :::::.. mKIAA0 PIGGPPNGML 960 >>mKIAA0020 ( 496 res) mtk00084 (496 aa) initn: 67 init1: 67 opt: 250 Z-score: 159.7 bits: 40.3 E(): 0.00094 Smith-Waterman score: 250; 20.455% identity (22.420% ungapped) in 308 aa overlap (873-1168:9-301) 850 860 870 880 890 900 mKIAA0 SSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLER .:: . : :.: .. . ..: :: .. mKIAA0 EKRVKLMSDLQ-KLIQGKIKTIAFAHDSTRVIQCFIQY 10 20 30 910 920 930 940 950 960 mKIAA0 ATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQM .. .:. .:.:. .: .. ...::. .::. : . . ..::: .. . mKIAA0 GNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHS 40 50 60 70 80 90 970 980 990 1000 1010 mKIAA0 YGCRVIQKALEFIPSDQQVI---NEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQ . .. :. .:. .. : ...:: :.... :. . . ...: .: .:: .:. mKIAA0 EASAIV----EYAYNDKAILEQRNMLTEELYGNTFQLYKSAD-HPTLDKVLE-LQPAKLE 100 110 120 130 140 150 1020 1030 1040 1050 1060 1070 mKIAA0 FIIDAFK------GQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQY .:.: .: .: :. : .:. .. . : ..: ... . :.. . mKIAA0 LIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTHD 160 170 180 190 200 210 1080 1090 1100 1110 1120 1130 mKIAA0 GNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK---CVTHASRTERAVLI : : .: : :: :.:.. :: .. : ... ... :. :. .. . ..: mKIAA0 GARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDD-TKLVKQIII 220 230 240 250 260 270 1140 1150 1160 1170 1180 1190 mKIAA0 DEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGK .:. :.: ....:.:. :. ... .:.. mKIAA0 SEII-------SSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDT 280 290 300 310 320 1200 1210 mKIAA0 HILAKLEKYYMKNGVDLGPICGPPNGII mKIAA0 AIRRRELLESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAA 330 340 350 360 370 380 >>mKIAA0200 ( 1045 res) mpf00402 (1045 aa) initn: 86 init1: 56 opt: 225 Z-score: 142.1 bits: 38.1 E(): 0.0091 Smith-Waterman score: 257; 21.265% identity (24.715% ungapped) in 917 aa overlap (45-879:168-1038) 20 30 40 50 60 70 mKIAA0 GRNPSSSYRSARVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQ : : : : . . : . .. . .. mKIAA0 RPVAHLHDTVKRSLDSAASPQNGDQPNGYGDLFPGHKKTRREAPLGVSVSANGLPPASPL 140 150 160 170 180 190 80 90 100 110 mKIAA0 AQP-QPAANQAL-AAGTHS---SPV------PGSIGVAGRSQDDA----MVDYFFQRQHG .:: .:.....: .:: :: .:. ..: . : :... .. .... mKIAA0 GQPDKPSGGDTLQTAGKHSLGLDPINKKCLADSGIHLNGGSNSSEPFPLSLSKELKQEPV 200 210 220 230 240 250 120 130 140 150 160 170 mKIAA0 EQLGGGGSGGGGYNTSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGK ..: .:.:: .... : :.. .. . ..:::.. . . . . . : mKIAA0 DDLPCMIAGAGGSVAQSNLMPDL-NLNEQEWKELIEELNRSVPDEDM--KDLFTEDFEEK 260 270 280 290 300 310 180 190 200 210 220 230 mKIAA0 KFWETDESSKDGP--KGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQSFHVNSEVNSVL : : :. . : . : . .. .:. ......: . ::.: ... mKIAA0 KDPEPPGSATQTPLAQDINIKTEFSPAAF--EQEQLGSPQVRAGSAGQTF-----LGASS 320 330 340 350 360 240 250 260 270 280 290 mKIAA0 SPR-SESGGLGVSMVEYVLSSSPG-DSCLRKGGFGPRDADSDENDKGEKK----NKGTFD .: ..: .:: :.. . .:.:: :. . .. : .:... ... . ..: mKIAA0 APVGTDSPSLGSSQTLFHTTSQPGVDNS--SPNLMPASAQAQSAQRALTSVVLPSQGPGG 370 380 390 400 410 420 300 310 320 330 340 mKIAA0 GDKLGDLKEEGDVMDKTNGLPV-QNGIDADVKDFSRTPGNCQNSANEVDLLGPNQNGSE- ...:.. .. .. : . . :: .: . .:: : .. . ::... . mKIAA0 ASELSSAHQLQQIAAKQKREQMLQNPQQA-----APAPGPGQLATWQ--QAGPSHSPLDV 430 440 450 460 470 350 360 370 380 390 mKIAA0 --GLAQLTSTNGAKPVEDFSNME-------SQSVP------LDPMEHVGMEPLQFDYSGT . . .: .: : .::.: . ..: : :.: : .. : . . mKIAA0 PYPMEKPASPSGYK--QDFTNSKLLMMPGVNKSSPRPGGPYLQP-SHSNLLSHQSPSNLN 480 490 500 510 520 530 400 410 420 430 440 450 mKIAA0 QVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAA---AHQPHIAGLAP : ::.. .. ..::.. . : . .: : .. :.. :: : . ::... mKIAA0 QNPVNNQGS---VLDYGNTKPLSHY-KADCGQGGPGSGQNKPALMAYLPQQLPHLSNEQN 540 550 560 570 580 590 460 470 480 490 500 mKIAA0 AAFVPNPY-----IISAAPPGTD--PYTAGLAA-AATLG--PAVVPHQYYGVTPWGVYPA . :. .: . : .::: . : .. .:: ::..: :.: . .. .:. mKIAA0 SLFLMKPKSGNMPFRSLVPPGQEQNPSSVPVAAPAASVGTQPTVSVASTHNSSPY----- 600 610 620 630 640 510 520 530 540 550 mKIAA0 SLFQQQAAAAAAATNSATQQSAPQAQQGQQQVLRGGASQRPLTPNQNQQGQQ---TDPLV : .:: ::. . .:. . : ::: :. :. :. ...:: :. : mKIAA0 -LSSQQQAAVMKQHQLLLDQQKQREQLQQQQFLQ---RQHLLAEQEKQQFQRHLTRPPPQ 650 660 670 680 690 700 560 570 580 590 600 mKIAA0 AAAAVNSALA--FGQ--GLAAGMPGYPVLAPAA-----YYDQTGALVVNAGARNGLGAPV ..:.. :: : .:..::. :.:. . : :.:. . : . ::: mKIAA0 YQDPTQSTFPQQVGQFTGPSAAVPGMNNLGPSNSSCPRVFPQPGTLM-SMGPGH---APV 710 720 730 740 750 610 620 630 640 650 660 mKIAA0 RLVAPAPVIISSSAAQ--AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQP- . . . ..:: .. . : : :.::: . : : .:. :.: mKIAA0 SSLPSSSGQQDRGVAQFTGSQSLPQNSLYGMASGLAQIVAQP-PPQATSTHAHIPRQTNV 760 770 780 790 800 810 670 680 690 700 710 720 mKIAA0 SNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAV ..: ..:. ::.:::.: : :.. :.:. :. :. :. .. ... : mKIAA0 GQNASTSAAYGQNSLGSASLSQQ-HSKGTLPPGLTKPQVPRVSAAMGSQNASWQHQGMPN 820 830 840 850 860 870 730 740 750 760 770 mKIAA0 ANSNTGSGSRRDSLTGSSDLYKRTSSSLAPIGHSF--------YSSLSYSSSPGPVGMPL .:.:...: . .:.. ... . .. : :..: .. :: ... ::. :. mKIAA0 LSSQTSGNSSVNPFTAAPSFHIQ-QAHLKLAGQQFSQAMPSRPMAPLSSAGAAGPMLPPV 880 890 900 910 920 930 780 790 800 810 820 830 mKIAA0 PSQ--GPGHSQTPPPSLSSHG----SSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSAS .: . . ...:: . ..: : :. .::.. .. .:. :: . .: . mKIAA0 SAQQRNSAPASAPPQAAPQQGLPGLSPSGPELGAFGQSPTSQMSGRPGLHCA--QAYPVR 940 950 960 970 980 990 840 850 860 870 880 890 mKIAA0 SLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHG .. . .:.. :.:.: .:.. :.... .:: . . :. mKIAA0 TMGQELPFAYSGQPGSSGLSSV--AGHTDLIDSLLKNRTSEEWINELDDLLGSQ 1000 1010 1020 1030 1040 900 910 920 930 940 950 mKIAA0 SRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIR 1218 residues in 1 query sequences 1767799 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:12:14 2006 done: Mon Mar 27 10:12:16 2006 Scan time: 1.190 Display time: 0.240 Function used was FASTA [version 3.4t11 Apr 17, 2002]