# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg05721.fasta.nr -Q ../query/mKIAA3006.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA3006, 617 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7892051 sequences Expectation_n fit: rho(ln(x))= 4.6355+/-0.000186; mu= 12.9145+/- 0.010 mean_var=73.7568+/-14.087, 0's: 26 Z-trim: 192 B-trim: 47 in 2/65 Lambda= 0.149339 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148708346|gb|EDL40293.1| RIKEN cDNA 9030612M13 ( 615) 4375 952.8 0 gi|27696770|gb|AAH43671.1| RIKEN cDNA 9030612M13 g ( 596) 4253 926.5 0 gi|149034746|gb|EDL89483.1| rCG29233 [Rattus norve ( 615) 4172 909.0 0 gi|26325012|dbj|BAC26260.1| unnamed protein produc ( 491) 3398 742.2 9.2e-212 gi|148708342|gb|EDL40289.1| cDNA sequence BC052046 ( 556) 1973 435.2 2.6e-119 gi|30354379|gb|AAH52046.1| Zinc finger protein 811 ( 552) 1963 433.1 1.2e-118 gi|161169036|ref|NP_899000.2| zinc finger protein ( 552) 1962 432.8 1.4e-118 gi|123232535|emb|CAM21132.1| novel KRAB box and zi ( 610) 1931 426.2 1.5e-116 gi|194213097|ref|XP_001915184.1| PREDICTED: simila ( 937) 1909 421.7 5.4e-115 gi|149250475|ref|XP_001472364.1| PREDICTED: simila ( 839) 1838 406.3 2e-110 gi|123232533|emb|CAM21130.1| novel KRAB box and zi ( 610) 1814 401.0 5.8e-109 gi|149260954|ref|XP_001475594.1| PREDICTED: simila ( 645) 1784 394.6 5.3e-107 gi|194213105|ref|XP_001496743.2| PREDICTED: zinc f ( 602) 1776 392.8 1.7e-106 gi|114675515|ref|XP_524120.2| PREDICTED: hypotheti (1305) 1772 392.3 5.2e-106 gi|62651814|ref|XP_343178.2| PREDICTED: similar to ( 556) 1741 385.2 3e-104 gi|123227460|emb|CAM27169.1| novel KRAB box and zi ( 834) 1735 384.1 9.6e-104 gi|26327185|dbj|BAC27336.1| unnamed protein produc ( 727) 1730 383.0 1.8e-103 gi|18314651|gb|AAH21921.1| Zinc finger protein 709 ( 727) 1728 382.5 2.5e-103 gi|148708343|gb|EDL40290.1| cDNA sequence BC052046 ( 495) 1714 379.4 1.5e-102 gi|149250150|ref|XP_001480959.1| PREDICTED: simila ( 641) 1708 378.2 4.5e-102 gi|75075664|sp|Q4R4C7.1|ZNF14_MACFA RecName: Full= ( 642) 1706 377.7 6.1e-102 gi|41946935|gb|AAH66107.1| CDNA sequence BC066107 ( 561) 1701 376.6 1.2e-101 gi|119605264|gb|EAW84858.1| zinc finger protein 14 ( 642) 1696 375.6 2.7e-101 gi|148696789|gb|EDL28736.1| mCG117755 [Mus musculu ( 839) 1696 375.7 3.3e-101 gi|28202263|sp|P17017.2|ZNF14_HUMAN RecName: Full= ( 642) 1693 374.9 4.2e-101 gi|75070676|sp|Q5R9F0.1|ZNF14_PONAB RecName: Full= ( 642) 1692 374.7 4.9e-101 gi|148706729|gb|EDL38676.1| mCG1039360 [Mus muscul ( 720) 1688 373.9 9.7e-101 gi|123210392|emb|CAM27283.1| novel KRAB box and zi ( 582) 1687 373.6 9.7e-101 gi|114676311|ref|XP_524165.2| PREDICTED: zinc fing (1267) 1689 374.4 1.2e-100 gi|3953593|dbj|BAA34724.1| Zinc finger protein s11 ( 587) 1685 373.2 1.3e-100 gi|126325118|ref|XP_001375685.1| PREDICTED: simila ( 744) 1677 371.6 5.1e-100 gi|148688551|gb|EDL20498.1| mCG7830, isoform CRA_c (1659) 1677 371.9 8.9e-100 gi|149250458|ref|XP_001472116.1| PREDICTED: simila ( 569) 1667 369.3 1.9e-99 gi|123207821|emb|CAM26620.1| novel KRAB box and zi ( 526) 1662 368.2 3.8e-99 gi|74760022|sp|Q8N972.1|ZN709_HUMAN RecName: Full= ( 641) 1660 367.8 5.8e-99 gi|119604682|gb|EAW84276.1| zinc finger protein 70 ( 721) 1660 367.9 6.3e-99 gi|12483906|gb|AAG53889.1| zinc finger protein HIT ( 736) 1660 367.9 6.4e-99 gi|148689403|gb|EDL21350.1| mCG118030, isoform CRA ( 785) 1656 367.1 1.2e-98 gi|95025680|gb|ABF50841.1| Arg3.1/Arc mRNA-binding ( 463) 1651 365.8 1.8e-98 gi|149260962|ref|XP_989844.2| PREDICTED: hypotheti ( 625) 1651 365.9 2.2e-98 gi|149261362|ref|XP_990773.2| PREDICTED: similar t ( 587) 1649 365.4 2.8e-98 gi|149020416|gb|EDL78221.1| rCG31665 [Rattus norve ( 639) 1649 365.5 3e-98 gi|148669906|gb|EDL01853.1| mCG58995, isoform CRA_ ( 609) 1646 364.8 4.6e-98 gi|148678824|gb|EDL10771.1| mCG141471 [Mus musculu ( 701) 1646 364.9 5e-98 gi|123232536|emb|CAM21133.1| novel KRAB box and zi ( 522) 1642 363.9 7.4e-98 gi|126325112|ref|XP_001375524.1| PREDICTED: simila ( 824) 1644 364.5 7.6e-98 gi|123222748|emb|CAM21998.1| novel KRAB box and zi ( 554) 1642 363.9 7.8e-98 gi|148688115|gb|EDL20062.1| mCG21740 [Mus musculus ( 586) 1642 363.9 8.1e-98 gi|123211459|emb|CAM28025.1| novel KRAB box and zi ( 554) 1639 363.2 1.2e-97 gi|126339341|ref|XP_001368177.1| PREDICTED: simila (1530) 1638 363.5 2.8e-97 >>gi|148708346|gb|EDL40293.1| RIKEN cDNA 9030612M13 [Mus (615 aa) initn: 4375 init1: 4375 opt: 4375 Z-score: 5094.5 bits: 952.8 E(): 0 Smith-Waterman score: 4375; 100.000% identity (100.000% similar) in 615 aa overlap (3-617:1-615) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA3 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA3 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA3 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA3 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA3 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA3 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA3 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN 540 550 560 570 580 590 610 mKIAA3 HLHRHELLHTTLDSSVF ::::::::::::::::: gi|148 HLHRHELLHTTLDSSVF 600 610 >>gi|27696770|gb|AAH43671.1| RIKEN cDNA 9030612M13 gene (596 aa) initn: 4253 init1: 4253 opt: 4253 Z-score: 4952.6 bits: 926.5 E(): 0 Smith-Waterman score: 4253; 100.000% identity (100.000% similar) in 596 aa overlap (22-617:1-596) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN ::::::::::::::::::::::::::::::::::::::: gi|276 MLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN 10 20 30 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA3 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA3 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA3 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA3 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA3 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA3 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA3 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|276 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN 520 530 540 550 560 570 610 mKIAA3 HLHRHELLHTTLDSSVF ::::::::::::::::: gi|276 HLHRHELLHTTLDSSVF 580 590 >>gi|149034746|gb|EDL89483.1| rCG29233 [Rattus norvegicu (615 aa) initn: 4137 init1: 4137 opt: 4172 Z-score: 4858.1 bits: 909.0 E(): 0 Smith-Waterman score: 4172; 95.455% identity (98.377% similar) in 616 aa overlap (3-617:1-615) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 MESVAFEDVAVNFSLEEWAMLNPNQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL ::.:::::::::::::::::::::::::::::::::::: ::.::::::::::::::::: gi|149 SWRKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLQGVHICENSGCATVVIGHLSL 60 70 80 90 100 110 130 140 150 160 170 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEY-GAPSSSLTSFENYESTYTVERIYKTERCDEDY ::::::: .. : :. .::::::. : :: :.:::::::::.:::..:.::::.::::: gi|149 SVLLKPDTERASYEE-DYGKELYSSEQLGAASNSLTSFENYENTYTLQRLYKTEQCDEDY 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA3 RYGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQ ::::::::::.:.::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RYGQNVEKTFNEDKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQ 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA3 THERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTR 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA3 IHTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IHTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSG 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA3 VKPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VKPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPY 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA3 VCNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQ ::::::::::::::::::::::::::::::::::::: ::.::::::::::::::::::: gi|149 VCNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFASSTDLLEHEQTHIDEKPYICEQ 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA3 CGNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CGNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKT 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA3 FLWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 FLWSYSLQRHEKTHTDGKLHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTL 540 550 560 570 580 590 600 610 mKIAA3 NHLHRHELLHTTLDSSVF :::::::::::::::::: gi|149 NHLHRHELLHTTLDSSVF 600 610 >>gi|26325012|dbj|BAC26260.1| unnamed protein product [M (491 aa) initn: 4476 init1: 3398 opt: 3398 Z-score: 3958.1 bits: 742.2 E(): 9.2e-212 Smith-Waterman score: 3398; 99.585% identity (100.000% similar) in 482 aa overlap (3-484:1-482) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SWKRLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA3 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA3 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA3 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA3 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA3 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA3 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF :::. gi|263 GNALRAVESVSEA 480 490 >>gi|148708342|gb|EDL40289.1| cDNA sequence BC052046, is (556 aa) initn: 1973 init1: 1973 opt: 1973 Z-score: 2298.2 bits: 435.2 E(): 2.6e-119 Smith-Waterman score: 1973; 50.995% identity (74.322% similar) in 553 aa overlap (1-553:3-555) 10 20 30 40 50 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIY :::: :.::::::.:..::::.:. :::.::::::.: :::..:::. .:. :.: : gi|148 MSLEMELVTFEDVAVHFTMEEWALLDLSQKELYKDVMKEILRNVVSIGDIRKHQKIDNKY 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA3 RNSWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHL .:: .:: :.:: :.:::. :.::::: :.:.. ::.. :::.::. .: ..:.:::: gi|148 QNSGRKLRCQLVEKLHDCKEGHECAEIFKFSTEGTVNHEFYPGVHICKRNGFVNVLIGHL 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA3 SLSVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDED ...: ::: : ..: : ::.::..:. : . ::. :.....:. .:. ::.. ::: gi|148 AINVRLKPRPGQKSNEVQEHGKNVYTKESQGTSSASPSLQKHQSAEPAEKSDKTKQPDED 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA3 YRYGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYL : ::: :.: .::: .::.::: .: ..:::....:::: :::::::: ::. : gi|148 LRLGQNHERTPAEEKHHKCKHCGKACTSLSSLKRHEQHYHAKKCSKCKQCGKAFPFPSSL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA3 QTHERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHT :.:.:::::::::.: :::::.:: :: :.: :. . :. : ::. . .:: : gi|148 QVHQRIHTGEKPYACKTCGKTFGHSSSLLRHERIHTGSSPHECKLCKKTFTRLNSLLRHK 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA3 RIHTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHS ::::::::.:. ::::: :.. : :.:::: :: :::::..:. :. :: :. gi|148 IIHTGEKPYACNQCGKAFSRSASLQRHTRLHTGEKPYVCKQCGKAFITSTYLQVHERTHT 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA3 GVKPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKP : :::.:: ::..: ... :. .:.: :.:: ::: .::::..: :. :::::: gi|148 GEKPYVCKECGSTFMLWTQFQKHKIVHSGVNPFVCKQCGKAFTRLGTLQIHERIHTGEKP 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA3 YVCNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICE :::..:.:.: ..:.:: ::. :::.::::: .: :. : ::. : .::.: gi|148 YVCKQCAKAFMSLTQLRRHEIIHSGIKPYMCKQCGKGFLCSTTLRSHEKIHSGSNPYVCS 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA3 QCGNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGK :: .. : ..::: .:. :::::::.:: ::. : .:.::::.:::.::: gi|148 QCEKVVSSESALRKHKMIHTGEKPCVCKQCGKTFTHLSSLQYHALMHSGEKPHECKKCGK 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA3 TFLWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFT : :..::.:. gi|148 GFRSLSHLKKHERTQH 550 >>gi|30354379|gb|AAH52046.1| Zinc finger protein 811 [Mu (552 aa) initn: 1963 init1: 1963 opt: 1963 Z-score: 2286.6 bits: 433.1 E(): 1.2e-118 Smith-Waterman score: 1964; 50.087% identity (72.097% similar) in 577 aa overlap (3-579:1-549) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :: :.::::::.:..::::.:. :::.::::::.: :::..:::. .:. :.: :.: gi|303 MELVTFEDVAVHFTMEEWALLDLSQKELYKDVMKEILRNVVSIGDIRKHQKIDNKYQN 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL : .:: :.:: :.:::. :.::::: :.:.. ::.. :::.::. .: ..:.::::.. gi|303 SGRKLRCQLVEKLHDCKEGHECAEIFKFSTEGTVNHEFYPGVHICKRNGFVNVLIGHLAI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR .: ::: : ..: : ::.::..:. : . ::. :.....:. .:. ::.. ::: : gi|303 NVRLKPRPGQKSNEVQEHGKNVYTKESQGTSSASPSLQKHQSAEPAEKSDKTKQPDEDLR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA3 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT ::: :.: .::: .::.::: .: ..:::....:::: :::::::: ::. ::. gi|303 LGQNHERTPAEEKHHKCKHCGKACTSLSSLKRHEQHYHAKKCSKCKQCGKAFPFPSSLQV 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA3 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI :.:::::::::.: :::::.:: :: ::: :: gi|303 HQRIHTGEKPYACKTCGKTFGHSSSL---------------------LRH-------ERI 240 250 260 270 310 320 330 340 350 360 mKIAA3 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV ::: .:. :: : :.: :. :. ::::: :: :.:::..: : .:..: .:.: gi|303 HTGSSPHECKLCKKTFTRLNSLLRHKIIHTGEKPYACNQCGKAFSRSASLQRHTRLHTGE 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA3 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV :::.:: :::.: : :..::: ::::.:::: .:: .: ... .:::.:.: .:.: gi|303 KPYVCKQCGKAFITSTYLQVHERTHTGEKPYVCKECGSTFMLWTQFQKHKIVHSGVNPFV 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA3 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC :..:::.: : ..:: : .::: :::::::::. :: : ..: .:: : :::.:.:: gi|303 CKQCGKAFTRLGTLQIHERIHTGEKPYVCKQCAKAFMSLTQLRRHEIIHSGIKPYMCKQC 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA3 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF :..:. . ...:. .:. :::.:: : .: ::. :. ::::::: :::::::: gi|303 GKGFLCSTTLRSHEKIHSGSNPYVCSQCEKVVSSESSLRKHKMIHTGEKPCVCKQCGKTF 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA3 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN ::: : :. : : ::.::. : :::. ::. gi|303 THLSSLQYHALMHSGEKPHECKKCGKGFRSLSHLKKHERTQH 520 530 540 550 610 mKIAA3 HLHRHELLHTTLDSSVF >>gi|161169036|ref|NP_899000.2| zinc finger protein 811 (552 aa) initn: 1962 init1: 1962 opt: 1962 Z-score: 2285.4 bits: 432.8 E(): 1.4e-118 Smith-Waterman score: 1962; 50.817% identity (74.229% similar) in 551 aa overlap (3-553:1-551) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :: :.::::::.:..::::.:. :::.::::::.: :::..:::. .:. :.: :.: gi|161 MELVTFEDVAVHFTMEEWALLDLSQKELYKDVMKEILRNVVSIGDIRKHQKIDNKYQN 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 SWKKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLPGVYICENSGCATVVIGHLSL : .:: :.:: :.:::. :.::::: :.:.. ::.. :::.::. .: ..:.::::.. gi|161 SGRKLRCQLVEKLHDCKEGHECAEIFKFSTEGTVNHEFYPGVHICKRNGFVNVLIGHLAI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 SVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTSFENYESTYTVERIYKTERCDEDYR .: ::: : ..: : ::.::..:. : . ::. :.....:. .:. ::.. ::: : gi|161 NVRLKPRPGQKSNEVQEHGKNVYTKESQGTSSASPSLQKHQSAEPAEKSDKTKQPDEDLR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA3 YGQNVEKTFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQT ::: :.: .::: .::.::: .: ..:::....:::: :::::::: ::. ::. gi|161 LGQNHERTPAEEKHHKCKHCGKACTSLSSLKRHEQHYHAKKCSKCKQCGKAFPFPSSLQV 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA3 HERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRI :.:::::::::.: :::::.:: :: :.: :. . :. : ::. . .:: : : gi|161 HQRIHTGEKPYACKTCGKTFGHSSSLLRHERIHTGSSPHECKLCKKTFTRLNSLLRHKII 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA3 HTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGV :::::::.:. ::::: :.. : :.:::: :: :::::..:. :. :: :.: gi|161 HTGEKPYACNQCGKAFSRSASLQRHTRLHTGEKPYVCKQCGKAFITSTYLQVHERTHTGE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA3 KPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYV :::.:: ::..: ... :. .:.: :.:: ::: .::::..: :. :::::::: gi|161 KPYVCKECGSTFMLWTQFQKHKIVHSGVNPFVCKQCGKAFTRLGTLQIHERIHTGEKPYV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA3 CNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQC :..:.:.: ..:.:: ::. :::.::::: .: :. : ::. : .::.: :: gi|161 CKQCAKAFMSLTQLRRHEIIHSGIKPYMCKQCGKGFLCSTTLRSHEKIHSGSNPYVCSQC 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA3 GNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTF .. : ..::: .:. :::::::.:: ::. : .:.::::.:::.::: : gi|161 EKVVSSESALRKHKMIHTGEKPCVCKQCGKTFTHLSSLQYHALMHSGEKPHECKKCGKGF 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA3 LWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLN :..::.:. gi|161 RSLSHLKKHERTQH 540 550 >>gi|123232535|emb|CAM21132.1| novel KRAB box and zinc f (610 aa) initn: 1696 init1: 1696 opt: 1931 Z-score: 2248.8 bits: 426.2 E(): 1.5e-116 Smith-Waterman score: 1931; 46.266% identity (69.968% similar) in 616 aa overlap (3-610:1-602) 10 20 30 40 50 60 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVMQETLRNLASIGSSLEHHIIENIYRN :. :...:: :::. ::::.:.::::.:::::: :: ::: .:: : : :. ... gi|123 MDLVTYDDVQVNFTQEEWALLDPSQKSLYKDVMLETYRNLKAIGYIWEGHTSEDHFQT 10 20 30 40 50 70 80 90 100 110 mKIAA3 SWKKLSGQVVEGLYDCKDDH--QCAEIFDFTTHSIVNQNSLPGV--YICENSGCATVVIG : . :. .. : .. ::.. : . . .. . : : :.. : : .. . gi|123 S--RSHGRHERSCTAVKPSEFIQCGKAFAYQSLRQRHERTHKGEKDYYCNQCGKAFIISS 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA3 HLSLSVLLKPDPKHESCEDQEYGKELYNMEYGAPSSSLTS-FENYESTYTVERIYKTERC ::.. :. .. :.. :. . . .. : .. ...:.: :. :. ..: gi|123 HLQI---------HKR---RNTGEKPYECNQCCKTCTVRSDLQIHKQTHTGEKPYECNQC 120 130 140 150 160 180 190 200 210 220 230 mKIAA3 DEDYRYGQNVEKTFTE---EKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAF . . . . .: . :::.::.:::: :. .: :.: : ..: : ::::.::: gi|123 GKAFAGSGDFQKHKRRQRGEKPYECNQCGKTFAVRSDLRIHKRTHTGEKPYECKQCSKAF 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA3 AFPTYLQTHERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYS :: :.: ::::::: : ::::.: .: .:. :::::. .. . :: :::.. . . gi|123 IRRGDLQIHKRTHTGEKPYECNQCGKAFIRSADLQIHKRTHTGEQPYECNQCGKAFIRSG 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA3 SLQIHTRIHTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRK .:::: ::::::::: :: ::::: ...:::: :::: ::::::::..:.: .:. gi|123 DLQIHKRIHTGEKPYECKQCGKAFTKSSNLQIHERTHTGEKPYECKQCGKAFIRSGDLQI 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA3 HEIIHSGVKPYACKLCGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKIT :. :.: ::: :. :::.: ::.:. :.: ::::.:: : ::: .::. ..: :. : gi|123 HKRTHTGEKPYECNQCGKAFIRSGDLQIHKRTHTGEKPYECKQCGKAFTKSSNLQIHERT 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA3 HTGEKPYVCNHCGKTFPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDE ::::::: :..:::.: .:..:: : . :: :::: ::::: :: :.:: :..:: : gi|123 HTGEKPYECKQCGKAFTKSSNLQIHERTHTGEKPYECKQCGKAFIRSGDLQIHKRTHTGE 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA3 KPYICEQCGNAFVLWSQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYE .:: :.:::.::. ...: :: :. : ::::::.::.: .:. ::: :::::::: gi|123 QPYECNQCGKAFIRSGDLQIHKRTHTGEKPYECKQCGKAFTKSSNLQIHERTHTGEKPYE 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA3 CKQCGKTFLWSYSLQRHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYC ::::::.:. : .:: :..::: : . :::::..: .:.::.::. : ..:..:. : gi|123 CKQCGKAFIRSGDLQIHKRTHTGEKPYECKQCGKAFTKSSNLQIHERTHTGEKPYECNQC 530 540 550 560 570 580 600 610 mKIAA3 GKPFFTLNHLHRHELLHTTLDSSVF :: :. ..:.::. :: gi|123 GKAFIHSGNLKRHKRTHTGEKLYEGI 590 600 610 >>gi|194213097|ref|XP_001915184.1| PREDICTED: similar to (937 aa) initn: 1552 init1: 1552 opt: 1909 Z-score: 2220.9 bits: 421.7 E(): 5.4e-115 Smith-Waterman score: 1909; 45.440% identity (70.195% similar) in 614 aa overlap (1-610:111-723) 10 20 30 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNL :. .:::.:::.:::. ::::.:.::::.: gi|194 AAPRVPDGAGPAGGPAGQSGLGFRGPCAERLRSDSVAIEDVTVNFTPEEWALLDPSQKKL 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA3 YKDVMQETLRNLASIGSSLEHHIIENIYRNSWKKLSGQVVEGLYDCKDDHQCAEIFDFTT :.::: :: :::::.:.. : . ::. :.: .:: ...: : . .. : .: :.. gi|194 YRDVMWETCRNLASVGKTWESRYIEDQYKNWGRKLRSNMVMRLCESEEGSQSGENFSLIP 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA3 HSIVNQNSLPGVYICENSGCATVVIGHLSLSVLLKPDPKHESCEDQEYGKELYNMEYGAP . .... . : :: :.:. . : ::. .. .:. . :..:.. :. . gi|194 NLNLDKK-IAGGKACECSSCGKGFMHHSSLNRHVRCHTEHKPYDPQKHGEKPYKSKKCEK 210 220 230 240 250 160 170 180 190 200 mKIAA3 SSSLTSF-ENYESTYTVERIYKTERCDEDYRYGQNV---EKTFTEEKPFECKQCGKCFSS . .. :: . .: :.: .. .. . : . .:. ..: :.: : :::.::: ::: :: gi|194 AFTFPSFVQIHERTHTGKKPFECKICGKAFRFPSDVRVHERTHTGEKPYECKICGKAFSF 260 270 280 290 300 310 210 220 230 240 250 260 mKIAA3 SRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQTHERIHTGEKPYVCLQCGKTFAHSRSL : . :.: : ..: : ::.::::: :: :..: :::. :: : .: :.: . gi|194 SFSVQVHQRIHTGEKPYKCKECGKAFITPTSLRAHMISHTGDGPYKCKECEKSFISPSIF 320 330 340 350 360 370 270 280 290 300 310 320 mKIAA3 KTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRIHTGEKPYVCKPCGKAFITYRSFRIHE . :.:::. . . :. :.:.. :::. : : ::: ::: :: ::::: .:..:: gi|194 RIHERTHTGEKPYECKECSKAFSCTSSLRKHERTHTGAKPYECKICGKAFSFSSNFHVHE 380 390 400 410 420 430 330 340 350 360 370 380 mKIAA3 RIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGVKPYACKLCGKSFTCSGSLRTHERIHT : :::: :.:::.:..::. :.::: ::.: ::. ::.:::.: :.::. ::: :: gi|194 RTHTGEKPFECKKCNKTFISPSLLQKHERIHTGEKPFECKMCGKAFRFSNSLQIHERTHT 440 450 460 470 480 490 390 400 410 420 430 440 mKIAA3 GERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYVCNHCGKTFPRSASLQRHVKIHTEEKP ::.:: : .:. .:: .:: :. :::::::: :..:.:.: :.::. : . :: ::: gi|194 GEKPYECKKCSKAFTSSSSLQNHERTHTGEKPYECKKCSKAFTSSSSLRVHERNHTGEKP 500 510 520 530 540 550 450 460 470 480 490 500 mKIAA3 YVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQCGNAFVLWSQFQKHKALHAVPVSYVCK : ::.:. :: ::..: ::..: :::: :..::.:: :...::. :. : :: gi|194 YECKKCSKAFTSSSSLQIHERSHTGEKPYECKECGKAFSCTSSLRKHERTHTGVKPYECK 560 570 580 590 600 610 510 520 530 540 550 560 mKIAA3 QCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTFLWSYSLQRHEKTHTDGKVHVCKQCGE :::.:. : ....::: :: :::::::.: :.: : ::: ::.::: : . :: ::. gi|194 ICGKAFSFSSNVHVHERTHTVEKPYECKKCRKAFTSSNSLQIHERTHTGEKPYECKICGK 620 630 640 650 660 670 570 580 590 600 610 mKIAA3 TFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLNHLHRHELLHTTLDSSVF .: ..:..::::. : ..:..:: :.: : . :..:: :: gi|194 AFRFSSNVQVHERTHTGEKPYECKECSKAFSCTSSLRKHERTHTGGKLYECKKRCTNLAN 680 690 700 710 720 730 gi|194 QGSRPTPELLHLFMGLTNQQEPANPLQRSLRIKSCAEQSTRTSGARLTGTALTLRQEGAW 740 750 760 770 780 790 >>gi|149250475|ref|XP_001472364.1| PREDICTED: similar to (839 aa) initn: 1727 init1: 1727 opt: 1838 Z-score: 2138.8 bits: 406.3 E(): 2e-110 Smith-Waterman score: 1899; 44.866% identity (67.141% similar) in 633 aa overlap (6-610:87-719) 10 20 30 mKIAA3 LEMESVAFEDVAVNFSLEEWAMLNPSQKNLYKDVM :...:: :::. .:::.:.::::.::: :: gi|149 NLAQASSELHTCVDLQGSQRLGSPGSGKDLVTYDDVQVNFTQDEWALLDPSQKSLYKGVM 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA3 QETLRNLASIGSSLEHHIIENIYRNSWKKLSGQVVEGLYDCKDDHQCAEIFDFTT----- :: :::..:: :.: ::. ...: .. . . . .: ::.. : . . gi|149 LETYRNLTAIGYIWEEHTIEDHFQTSRSHGRHERSCSPEQPSDFIQCGKAFAYESAFERR 120 130 140 150 160 170 100 110 120 130 mKIAA3 -HSIVNQNSLPGV--YICENSGCATVVIGHLSLSVLLKPDPKHESC-------------- : ... . : : :.. : : . : :. . : : gi|149 SHLQIHKRTHTGEKPYECNQCGKAFARSGVLQKHKRTHTGEKPYECKQCGKAFAQSSHLH 180 190 200 210 220 230 140 150 160 170 180 mKIAA3 --EDQEYGKELYNMEY-GAPSSSLTSFENYESTYTVERIYKTERCDEDYR--YGQNVEK- : . : . :. . : . ..... .. :.: . :. ..: . . : ...: gi|149 KHERTHTGDKPYECKQCGKAFAVISTLQMHKRTHTGAKPYECKQCGKAFAVIYTLQMHKQ 240 250 260 270 280 290 190 200 210 220 230 240 mKIAA3 TFTEEKPFECKQCGKCFSSSRYFRRHERRHRAKKCYICKQCGKAFAFPTYLQTHERIHTG : : :::..:::::: :. : ..: :.: : ..: : ::::::::: :: :.: ::: gi|149 THTGEKPYKCKQCGKAFARSCHLRIHKRTHTGEKPYECKQCGKAFARSGVLQQHKRTHTG 300 310 320 330 340 350 250 260 270 280 290 300 mKIAA3 EKPYVCLQCGKTFAHSRSLKTHKRTHSVRDLFVCNYCGKTLRHYSSLQIHTRIHTGEKPY :::: : ::::.::.: :. :::::. . . :: :::.. . ..:: : : ::::::: gi|149 EKPYECKQCGKAFAQSSHLRIHKRTHTGEKPYECNQCGKAFARSGDLQQHKRTHTGEKPY 360 370 380 390 400 410 310 320 330 340 350 360 mKIAA3 VCKPCGKAFITYRSFRIHERIHTGETPYECKQCGNTFMRWIQLRKHEIIHSGVKPYACKL :: ::::: .:::.: :::: ::::.:::..: : .:.::. :.: ::: :: gi|149 ECKQCGKAFAQSSHLRIHKRTHTGEKPYECNQCGKAFARSDDLQKHKRTHTGEKPYECKQ 420 430 440 450 460 470 370 380 390 400 410 420 mKIAA3 CGKSFTCSGSLRTHERIHTGERPYVCDQCGYSFTRLNSLLRHKITHTGEKPYVCNHCGKT :::.:. :. :. ::: :::..:: :.::: .:.. ..: :. ::::.::: ::.:::. gi|149 CGKAFAHSSHLHKHERTHTGDKPYECNQCGKAFAESSTLQIHNRTHTGDKPYECNQCGKA 480 490 500 510 520 530 430 440 450 460 470 480 mKIAA3 FPRSASLQRHVKIHTEEKPYVCKQCGVAFPSSADLLEHEQTHIDEKPYICEQCGNAFVLW : ::..::.: . :: :::: ::::: :: :. : .::.:: .::: :.:::.::. gi|149 FARSGDLQKHKQTHTGEKPYECKQCGKAFAHSSHLHKHERTHTGDKPYECNQCGKAFAES 540 550 560 570 580 590 490 500 510 520 530 540 mKIAA3 SQFQKHKALHAVPVSYVCKQCGKSFTSSRSLKTHERIHTGEKPYECKQCGKTFLWSYSLQ : .: :. :. : :.::::.:. .:. :.: ::::::::::::::.: : .:. gi|149 STLQIHNRTHTGDKPYECNQCGKAFAVISTLQMHNRTHTGEKPYECKQCGKAFSHSSNLR 600 610 620 630 640 650 550 560 570 580 590 600 mKIAA3 RHEKTHTDGKVHVCKQCGETFPYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLNHLHRHEL :..::: : . :.:::..: .. ::.:.. : ..:..:: ::: : .:::.:: gi|149 IHKRTHTGEKPYECNQCGKAFARNGDLQIHKQTHTGEKPYECKQCGKAFAHSSHLHKHER 660 670 680 690 700 710 610 mKIAA3 LHTTLDSSVF :: gi|149 THTGDKPYECNQCGKAFAESSTLQIHNRTHTGDKPYECNQCGKTFAESSTLQIHNRTHTG 720 730 740 750 760 770 617 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 22:05:13 2009 done: Mon Mar 16 22:12:30 2009 Total Scan time: 973.990 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]