FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0532.ptfa, 1603 aa vs ./tmplib.26680 library 1767414 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.7225+/-0.00437; mu= 18.7925+/- 0.293 mean_var=85.0554+/-19.472, 0's: 0 Z-trim: 5 B-trim: 2 in 1/35 Lambda= 0.1391 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA3021 ( 756 res) mbg12853 ( 756) 309 73 2.8e-13 mKIAA0986 ( 921 res) mbp09156 ( 921) 307 73 4.2e-13 mKIAA0453 ( 1918 res) mbg01969 (1918) 195 51 4e-06 >>mKIAA3021 ( 756 res) mbg12853 (756 aa) initn: 330 init1: 165 opt: 309 Z-score: 330.7 bits: 73.0 E(): 2.8e-13 Smith-Waterman score: 369; 28.807% identity (30.702% ungapped) in 243 aa overlap (1166-1406:480-709) 1140 1150 1160 1170 1180 1190 mKIAA0 MSGHHAQLFTGQQVLPVQVTQHAKALVNAVKLRKLLIQPVNLLI-SIHASLKLYIASDHT : . . :. ::::. :: :.: : mKIAA3 LSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMIAIHSVNLLLKSIGATLT---DVDDL 450 460 470 480 490 500 1200 1210 1220 1230 1240 1250 mKIAA0 PLSFSVFERGPVFTTARQLVHALAMHYAAGALFRAGWVVGSLEILGSPASLVRSIGNGIS .... .: : ::. ... ::. : . .: .:..::.: .:.:....:. mKIAA3 IFKLAYYEIRYQFYKRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVE 510 520 530 540 550 560 1260 1270 1280 1290 1300 1310 mKIAA0 DFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGALTSITNLATSLARNMGRLSLDEEH .: :..: ..:: :. :. :. :.: : :: .. .. :...... ...:.:. mKIAA3 ALFYEPFQGAVQGPEEFAEGLVIGVRSLVGHTVGGAAGVVSRITGSVGKGLAAITMDKEY 570 580 590 600 610 620 1320 1330 1340 1350 1360 1370 mKIAA0 YN-RQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSETQASAGHKA . :.:: :: :...:..: .: . . ...:...::. .:... .: . : mKIAA3 QQKRREEMGRQ-PKDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEG---------A 630 640 650 660 670 1380 1390 1400 1410 1420 1430 mKIAA0 KGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRCQPTHLYADQAPNS : ..:.:::..:. ..: :: ...:.: :: mKIAA3 AGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRVAESTEEVSSLRPPRLIHEDGIIRP 680 690 700 710 720 730 1440 1450 1460 1470 1480 1490 mKIAA0 HVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSISEDTQQQAFPI mKIAA3 YDRQESEGSDLLEQEMGTQE 740 750 >>mKIAA0986 ( 921 res) mbp09156 (921 aa) initn: 416 init1: 286 opt: 307 Z-score: 327.6 bits: 72.7 E(): 4.2e-13 Smith-Waterman score: 394; 23.772% identity (26.593% ungapped) in 509 aa overlap (949-1428:413-896) 920 930 940 950 960 970 mKIAA0 QGTQVVFLTGFGYVYVDIAQQCGTVFIILAPEGKA--GPIFTSTSRALERMVTFRMFITQ :. :: :. .. .. ::. :: . mKIAA0 DVGISLVNNYTKQEVAYIGITSSDVVWEAKPKKKARWKPMSVKHTEKLEK--EFREYTEA 390 400 410 420 430 440 980 990 1000 1010 1020 mKIAA0 LSLAVSDDLTHQAPSELLRLTLDNVFL--HVSPV-----PALLPGEEPPSSFFQLYGVEV : . . : .: : .: :: :: ::: : :. . . ... mKIAA0 SPLEDKVVELDNIPVRLTPSGNDMKILQPHVIPVRRNYLPAL-KVEYNTSAHQSSFRIQI 450 460 470 480 490 1030 1040 1050 1060 1070 1080 mKIAA0 YCGDLQLDNQLYNKSNFHFAVLVCQGERT---D--PAQYSRVQSLLVSSKALEEYKENCF : .:..::... . : :. . :. : : .. : :... : . . .. . mKIAA0 Y--RIQIQNQIHG-AIFPFVFYPIKPPRSVTMDSAPKPFTDV-SIVMRSAGHSQISRIKY 500 510 520 530 540 550 1090 1100 1110 1120 1130 mKIAA0 IKLCLTVSEGKDILLDVSEFTFELKPARLYVEDT-------FVYYIKTLFDTYLPPSRMS .:. . . :. ::.. :.. : .: : : .... . : : .. mKIAA0 FKVLI---QEMDLSLDLG-FVYALADLVTKAEVTEKTEVEHFHKDVEAFEQEYEVVSSVD 560 570 580 590 600 610 1140 1150 1160 1170 1180 1190 mKIAA0 GHHAQLFTGQQVLPVQVTQHAKALVNAVKLRKLLIQPVNLLISIHASLKLYIASDHTPLS ...:: .. :... : .. ... . . . . :: .: ::.: . : . :. mKIAA0 QSQVNLFEYFHISPIKL--HLSVSLSSGRDEAKDSEQHGGLIPVH-SLNLLLKSIGATLT 620 630 640 650 660 1200 1210 1220 1230 1240 mKIAA0 --------FSVFERGPVFTTARQLVHALAMHYAAGALFRAGWVVGSLEILGSPASLVRSI .. :: . : :. .: . ::. :. . .. .:..::.: .:.: . mKIAA0 DVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREF 670 680 690 700 710 720 1250 1260 1270 1280 1290 1300 mKIAA0 GNGISDFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGALTSITNLATSLARNMGRLS ..:. :: ::.: .:: :: :.. : ..: : . .......:.... .. mKIAA0 SEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMT 730 740 750 760 770 780 1310 1320 1330 1340 1350 1360 mKIAA0 LDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSETQASA .::.. ....: . : .: ::. .: . : .....:.::: .:... :: . mKIAA0 MDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEG------ 790 800 810 820 830 840 1370 1380 1390 1400 1410 1420 mKIAA0 GHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRCQPTHLYADQ : : ..:::::..:. :.: :: ...:.: :: ... :.. . : : ... .. mKIAA0 ---AAGFFKGVGKGLVGAVTRPTGGIIDMASSTFQGIKRATETSEVESLR--PPRFFNED 850 860 870 880 890 1430 1440 1450 1460 1470 1480 mKIAA0 APNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSISEDTQQQ mKIAA0 GVIRPYRLRDGSGNQMLQASKSLI 900 910 920 >>mKIAA0453 ( 1918 res) mbg01969 (1918 aa) initn: 206 init1: 119 opt: 195 Z-score: 202.4 bits: 50.6 E(): 4e-06 Smith-Waterman score: 269; 22.149% identity (26.031% ungapped) in 456 aa overlap (974-1421:1360-1755) 950 960 970 980 990 1000 mKIAA0 FIILAPEGKAGPIFTSTSRALERMVTFRMFITQLSLAVSDDLTHQAPSELLRLTLDNVFL ...: .:. .: ...: ::. .: .. . mKIAA0 RSSYEVEELPVTEQELQKLRNPDTHQELEVLVRLEGGVGVSLINKVPEELVFASLTGINI 1330 1340 1350 1360 1370 1380 1010 1020 1030 1040 1050 mKIAA0 HVSPVPALLPGEEPPSSFFQLYGVEVYCGDLQLDNQLYNKSN-FHFAVLVCQGE----RT : . . : : ...: ... :.:.:::: . .. : . : ..: .: mKIAA0 HYTQLAA--------SHMLEL-SIQ----DVQVDNQLIGTTQPFMLYVTPLSNENEVIET 1390 1400 1410 1420 1430 1060 1070 1080 1090 1100 1110 mKIAA0 DPA-QYSRVQSLLVSSKALEE-YKENCFIKLCLTVSEGKDILLDVSEFTFELKPARLYVE :: : . :. . :..:: . ::. .::. . .:: . : : :. :: mKIAA0 GPAVQVNAVK--FPSKSALTNIYKHLMVTAQRFTVQIEEKLLLKLLSF-FGYDQAESEVE 1440 1450 1460 1470 1480 1490 1120 1130 1140 1150 1160 1170 mKIAA0 DTFVYYIKTLFDTYLPPSRMSGHHAQLFTGQQVLPVQVTQHAKALVNAVKLRKLLIQPVN : ... . ....: .. . . : ... : .. .. :: :.. mKIAA0 K----YDENIHEK---TAEQGGTPTRYYF--ENLKISIPQIKLSVFTSNKL------PLD 1500 1510 1520 1530 1180 1190 1200 1210 1220 1230 mKIAA0 LLISIHASLKL-YIASDHTPLSFSVFERGPVFTTARQLVHALAMHYAAGALFRAGWVVGS : .....: . : . . .... : : . : . ... . :. : .:. ..:: mKIAA0 LK-ALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELLSQAARILGS 1540 1550 1560 1570 1580 1590 1240 1250 1260 1270 1280 1290 mKIAA0 LEILGSPASLVRSIGNGISDFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGALTSIT ...::.: .:. ....:.. ... : ........:. .: . mKIAA0 VDFLGNPMGLLNDVSEGVTGLIKYGNVG-----------------GLIRNVTHGVSNSAA 1600 1610 1620 1630 1640 1300 1310 1320 1330 1340 1350 mKIAA0 NLATSLARNMGRLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQP ..: .:. ..:. ..:..: ...: : . : :: : :. :. ...:...... . mKIAA0 KFAGTLSDGLGK-TMDNRHQSEREYIRYHAATS-GEHLVAGIHGLAHGIIGGLTSVITST 1650 1660 1670 1680 1690 1360 1370 1380 1390 1400 1410 mKIAA0 MQNFQKTSETQASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQL ... . .: .: : :::.:::..:. :::..:: ...:.:. .. : :: mKIAA0 VEGVK--TEGGVS------GFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSG- 1700 1710 1720 1730 1740 1420 1430 1440 1450 1460 1470 mKIAA0 PKQRCQPTHLYADQAPNSHVKYVWKMLQSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSE :. . : mKIAA0 PRTQAQRVRKPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLI 1750 1760 1770 1780 1790 1800 1603 residues in 1 query sequences 1767414 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:27 2006 done: Mon Mar 27 10:22:29 2006 Scan time: 1.280 Display time: 0.230 Function used was FASTA [version 3.4t11 Apr 17, 2002]