FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0567.ptfa, 979 aa vs ./tmplib.26680 library 1768038 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2911+/-0.00459; mu= 21.3971+/- 0.307 mean_var=108.8227+/-24.572, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.1229 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4093 ( 871 res) mfj26207 ( 871) 394 81 5.5e-16 >>mKIAA4093 ( 871 res) mfj26207 (871 aa) initn: 237 init1: 208 opt: 394 Z-score: 379.3 bits: 81.5 E(): 5.5e-16 Smith-Waterman score: 403; 23.066% identity (25.079% ungapped) in 685 aa overlap (306-975:27-671) 280 290 300 310 320 330 mKIAA0 ILERLEKENKELRKLVLQKDDKGIHHRKLKKSLIDMYSEVLDVLSDYDASYNTQDHLPRV ..:: . ... :..: . :.. ::.. mKIAA4 GPRARAGAAAGSQPAGPAATMGNRGMEDLIPLVNRLQDAFSAI--GQNADLDLPQI 10 20 30 40 50 340 350 360 370 380 390 mKIAA0 VVVGDQSAGKTSVLEMIAQARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLT .::: :::::.:::: .. ..::::: ..:: :. . : .. . : : . . mKIAA4 AVVGGQSAGKSSVLENFVGRDFLPRGSG-IVTRRPLVLQLVNSTTEYAEFLHCKGK---- 60 70 80 90 100 400 410 420 430 440 450 mKIAA0 KEEDLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMA : :. .: ::: . . . . .:: :.: : .: . ..::::::. .. .. . mKIAA4 KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQP 110 120 130 140 150 160 460 470 480 490 500 510 mKIAA0 PDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDL :: . : .. .. . : .:: .. .. : : . .....::.:.::: :.::.:: mKIAA4 PDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDL 170 180 190 200 210 220 520 530 540 550 560 570 mKIAA0 AEKNVASPSRIQQIIEGKLFPMKALGYFAVV--TGKG-NSSESIEAIREYEEEFFSEFKT .... . ....:.::.:.. ::..:: . : .....: : :..:: .. mKIAA4 MDEGTDA----RDVLENKLLPLRR-GYIGVVNRSQKDIDGKKDITAALAAERKFF--LSH 230 240 250 260 270 280 580 590 600 610 620 630 mKIAA0 AKDKHAKEQQADSFKATRFN--LETEWKNNYPRLRELDRNELFEKAKNEILDEVISLSQV . .: .... . .: : .. ... : ::. ...:. :. .:: .. mKIAA4 PSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKE--VDEYKNFRPD 290 300 310 320 330 340 640 650 660 670 680 690 mKIAA0 TPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDIKLKQWTDKQLPNKAVE : . . : : . .. .. . : . : :.. . .... ...: . :. mKIAA4 DPARKTKALLQ-MVQQFAVDFEKRIEGSGDQI---DTYELSGGARINRIFHERFPFELVK 350 360 370 380 390 700 710 720 730 740 mKIAA0 VAWET--LQEEFSRFMTEPKGKEHDDIFDKLK-EAVKEESIKRHKWNDFAEDSLRVIQHN . .. :..:.: . . .: . . : ::. ...... : .. .. :... mKIAA4 MEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDM-VVSEL 400 410 420 430 440 450 750 760 770 780 790 800 mKIAA0 ALEDRSISDK-QQWDAAIYFMEEALQGRLKDTENAIEN--MIGPDWKKRWMYWKNRTQEQ . :. :.: ::. ::. . .... :. .. :. : . .: : ..:. mKIAA4 TSTIRKCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYM---NTNHED 460 470 480 490 500 510 810 820 830 840 850 860 mKIAA0 CVHNETKNELEKMLKVNDEHPAYLASDEITTVRKN-LESRGVEVDPSLIKDTWHQVYRRH . : .. ..: .. . .::: ..::. : .. . . :. : mKIAA4 FIG--FANAQQRSNQMNKKKTSG-NQDEILVIRKGWLTINNIGIMKGGSKEYW------- 520 530 540 550 560 870 880 890 900 910 920 mKIAA0 FLKTALNHCNLCRRGFYYYQRHFID-SELECNDVVL-FWRIQRMLAITANTLRQQLTNTE :. :: : . . ...... ..:. :: : ....:. :: .:. . . mKIAA4 FVLTAEN-LSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALF-NT-EQRNVYKD 570 580 590 600 610 930 940 950 960 970 mKIAA0 VRRLEKNVKEVLEDFAEDGEKKVKLLTGKRVQLAEDLKKVREIQEK-LDAFIEALHQEK :.:: :. :. :. : : .: . . : .:. : .:. :.:.... mKIAA4 YRQLELAC-ETQEEV--DSWKASFLRAGVYPERVGDKEKASETEENGSDSFMHSMDPQLE 620 630 640 650 660 670 mKIAA4 RQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGDQNTLME 680 690 700 710 720 730 979 residues in 1 query sequences 1768038 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:23:17 2006 done: Mon Mar 27 10:23:18 2006 Scan time: 0.950 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]