# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg05536.fasta.nr -Q ../query/mKIAA0122.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0122, 860 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915745 sequences Expectation_n fit: rho(ln(x))= 6.1090+/-0.000196; mu= 9.9926+/- 0.011 mean_var=110.9041+/-21.296, 0's: 39 Z-trim: 53 B-trim: 39 in 1/64 Lambda= 0.121787 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148668422|gb|EDL00746.1| RNA binding motif prot ( 858) 5681 1009.5 0 gi|26354250|dbj|BAC40753.1| unnamed protein produc ( 853) 5646 1003.3 0 gi|74198465|dbj|BAE39715.1| unnamed protein produc ( 853) 5634 1001.2 0 gi|11134296|sp|P70501.1|RBM10_RAT RecName: Full=RN ( 852) 5552 986.8 0 gi|57209331|emb|CAI41700.1| RNA binding motif prot ( 853) 5442 967.5 0 gi|13111845|gb|AAH03089.1| RNA binding motif prote ( 852) 5435 966.3 0 gi|148682496|gb|EDL14443.1| mCG10403 [Mus musculus ( 852) 5366 954.1 0 gi|74148972|dbj|BAE32161.1| unnamed protein produc ( 929) 5222 928.9 0 gi|81880120|sp|Q99KG3.1|RBM10_MOUSE RecName: Full= ( 930) 5189 923.1 0 gi|74219368|dbj|BAE26813.1| unnamed protein produc ( 930) 5183 922.0 0 gi|149044378|gb|EDL97699.1| RNA binding motif prot ( 930) 5104 908.1 0 gi|119579687|gb|EAW59283.1| RNA binding motif prot ( 929) 5023 893.9 0 gi|168274384|dbj|BAG09612.1| RNA binding motif pro ( 929) 5017 892.8 0 gi|218512116|sp|P98175.3|RBM10_HUMAN RecName: Full ( 930) 4998 889.5 0 gi|119579690|gb|EAW59286.1| RNA binding motif prot ( 995) 4998 889.5 0 gi|31874030|emb|CAD97933.1| hypothetical protein [ ( 995) 4992 888.5 0 gi|74006808|ref|XP_538013.2| PREDICTED: similar to (1004) 4821 858.4 0 gi|119920292|ref|XP_582084.3| PREDICTED: similar t ( 762) 4782 851.5 0 gi|194227851|ref|XP_001917843.1| PREDICTED: simila (1005) 4597 819.1 0 gi|126342815|ref|XP_001371415.1| PREDICTED: simila (1008) 3907 697.8 5.8e-198 gi|62471421|gb|AAH93519.1| Rbm10 protein [Mus musc ( 591) 3891 694.8 2.7e-197 gi|148668421|gb|EDL00745.1| RNA binding motif prot ( 562) 3723 665.3 2e-188 gi|26334773|dbj|BAC31087.1| unnamed protein produc ( 557) 3688 659.1 1.4e-186 gi|6807976|emb|CAB70731.1| hypothetical protein [H ( 542) 3406 609.6 1.2e-171 gi|34785044|gb|AAH00681.1| RBM10 protein [Homo sap ( 541) 3235 579.5 1.3e-162 gi|82795835|ref|XP_926068.1| PREDICTED: similar to ( 751) 2782 500.1 1.5e-138 gi|82795833|ref|XP_926058.1| PREDICTED: similar to ( 770) 2719 489.0 3.3e-135 gi|74006804|ref|XP_862374.1| PREDICTED: similar to ( 401) 2605 468.7 2.1e-129 gi|74006806|ref|XP_862401.1| PREDICTED: similar to ( 719) 2581 464.7 6.2e-128 gi|149577371|ref|XP_001513536.1| PREDICTED: simila ( 799) 2311 417.3 1.3e-113 gi|109130671|ref|XP_001100638.1| PREDICTED: simila (1026) 1863 338.7 7.6e-90 gi|109039569|ref|XP_001104965.1| PREDICTED: RNA bi ( 818) 1789 325.6 5.3e-86 gi|149413060|ref|XP_001508682.1| PREDICTED: simila (1033) 1783 324.7 1.3e-85 gi|73985445|ref|XP_861280.1| PREDICTED: similar to ( 568) 1766 321.5 6.6e-85 gi|73985439|ref|XP_850319.1| PREDICTED: similar to ( 643) 1766 321.5 7.2e-85 gi|114586983|ref|XP_001167117.1| PREDICTED: RNA bi ( 814) 1765 321.4 9.7e-85 gi|109039557|ref|XP_001103773.1| PREDICTED: RNA bi ( 815) 1765 321.4 9.8e-85 gi|62087206|dbj|BAD92050.1| RNA binding motif prot ( 505) 1762 320.7 9.8e-85 gi|194380416|dbj|BAG63975.1| unnamed protein produ ( 744) 1762 320.9 1.3e-84 gi|149728630|ref|XP_001496627.1| PREDICTED: simila ( 815) 1762 320.9 1.4e-84 gi|13124794|sp|P52756.2|RBM5_HUMAN RecName: Full=R ( 815) 1762 320.9 1.4e-84 gi|148689278|gb|EDL21225.1| RNA binding motif prot ( 658) 1759 320.3 1.7e-84 gi|148689279|gb|EDL21226.1| RNA binding motif prot ( 707) 1759 320.3 1.8e-84 gi|1244404|gb|AAA99715.1| putative tumor suppresso ( 815) 1759 320.4 2e-84 gi|81902437|sp|Q91YE7.1|RBM5_MOUSE RecName: Full=R ( 815) 1759 320.4 2e-84 gi|194386328|dbj|BAG59728.1| unnamed protein produ ( 643) 1756 319.7 2.4e-84 gi|149018576|gb|EDL77217.1| RNA binding motif prot ( 815) 1757 320.0 2.6e-84 gi|116255985|sp|Q1RMU5.1|RBM5_BOVIN RecName: Full= ( 815) 1754 319.5 3.7e-84 gi|13278337|gb|AAH03988.1| Rbm5 protein [Mus muscu ( 520) 1748 318.3 5.5e-84 gi|1613900|gb|AAB42216.1| partial CDS, human putat ( 698) 1743 317.5 1.3e-83 >>gi|148668422|gb|EDL00746.1| RNA binding motif protein (858 aa) initn: 4833 init1: 3813 opt: 5681 Z-score: 5395.8 bits: 1009.5 E(): 0 Smith-Waterman score: 5681; 99.651% identity (99.767% similar) in 860 aa overlap (1-860:1-858) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|148 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|148 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS 780 790 800 810 820 830 850 860 mKIAA0 TESYKETLHKTMVTRFNEAQ :::::::::::::::::::: gi|148 TESYKETLHKTMVTRFNEAQ 840 850 >>gi|26354250|dbj|BAC40753.1| unnamed protein product [M (853 aa) initn: 4798 init1: 3813 opt: 5646 Z-score: 5362.6 bits: 1003.3 E(): 0 Smith-Waterman score: 5646; 99.649% identity (99.766% similar) in 855 aa overlap (6-860:1-853) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|263 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|263 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS 780 790 800 810 820 830 850 860 mKIAA0 TESYKETLHKTMVTRFNEAQ :::::::::::::::::::: gi|263 TESYKETLHKTMVTRFNEAQ 840 850 >>gi|74198465|dbj|BAE39715.1| unnamed protein product [M (853 aa) initn: 4786 init1: 3801 opt: 5634 Z-score: 5351.2 bits: 1001.2 E(): 0 Smith-Waterman score: 5634; 99.532% identity (99.649% similar) in 855 aa overlap (6-860:1-853) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|741 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|741 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|741 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAHEE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS 780 790 800 810 820 830 850 860 mKIAA0 TESYKETLHKTMVTRFNEAQ :::::::::::::::::::: gi|741 TESYKETLHKTMVTRFNEAQ 840 850 >>gi|11134296|sp|P70501.1|RBM10_RAT RecName: Full=RNA-bi (852 aa) initn: 3545 init1: 2565 opt: 5552 Z-score: 5273.4 bits: 986.8 E(): 0 Smith-Waterman score: 5552; 97.778% identity (99.532% similar) in 855 aa overlap (6-860:1-852) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH :::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|111 MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|111 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|111 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|111 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESTWAAPEE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV :::::::::::::::::::::::::::::::.::::::::::: .:.:::.:::.:.::: gi|111 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNTKGPGMTGTKGDTSGAGPETSLEGGTDSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP :::::::::::::::::::::::::::.::::::::::.::::::.::::::.::: :.: gi|111 SLQAFSRAQPGAAPGLYQQSAEGSSGQGTATNSQSYTIMSPAVLKSELQSPTHPSS-ALP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 PATSPTAPESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS 780 790 800 810 820 830 850 860 mKIAA0 TESYKETLHKTMVTRFNEAQ :::::::::::::::::::: gi|111 TESYKETLHKTMVTRFNEAQ 840 850 >>gi|57209331|emb|CAI41700.1| RNA binding motif protein (853 aa) initn: 4017 init1: 3041 opt: 5442 Z-score: 5168.9 bits: 967.5 E(): 0 Smith-Waterman score: 5442; 95.561% identity (99.065% similar) in 856 aa overlap (6-860:1-853) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH :::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|572 MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 DYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|572 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::.:::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|572 RLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|572 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE :::::::::::::::::::::::::::.::::::::::::::::::::::::..::. :: gi|572 TIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEE 300 310 320 330 340 350 370 380 390 400 410 mKIAA0 PPVDYSYYQQDEGYGSSQGTDS-LYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADS :::::::::::::::.::::.: ::::::::..::::.:::::::.:.::::::: :::: gi|572 PPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADS 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 VSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAF ::.:::::::::::::.::::::.::.:.::.:::::::.::::::.::::::.::: :. gi|572 VSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSS-AL 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 PPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD :::::::: :.::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 PPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 GERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENF ::::::.:::::::::::.::: ::::::::::::::::::::::::::::::::::::: gi|572 GERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENF 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 KNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLV ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 KNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLV 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 AAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 AAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLE 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 IHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 IHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFE 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 QPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 QPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVT 780 790 800 810 820 830 840 850 860 mKIAA0 STESYKETLHKTMVTRFNEAQ ::::::::::::::::::::: gi|572 STESYKETLHKTMVTRFNEAQ 840 850 >>gi|13111845|gb|AAH03089.1| RNA binding motif protein 1 (852 aa) initn: 4011 init1: 3035 opt: 5435 Z-score: 5162.3 bits: 966.3 E(): 0 Smith-Waterman score: 5435; 95.444% identity (98.949% similar) in 856 aa overlap (6-860:1-852) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH :::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|131 MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 DYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|131 HSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCFKCGVPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::.:::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|131 RLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL :::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|131 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI--EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE :::::::::::::::::::::::::::.::::::::::::::::::::::::..::. :: gi|131 TIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEE 300 310 320 330 340 350 370 380 390 400 410 mKIAA0 PPVDYSYYQQDEGYGSSQGTDS-LYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADS :::::::::::::::.::::.: ::::::::..::::.:::::::.:.::::::: :::: gi|131 PPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADS 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 VSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAF ::.:::::::::::::.::::::.::.:.::.:::::::.::::::.::::::.::: :. gi|131 VSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSS-AL 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 PPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD :::::::: :.::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 PPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 GERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENF ::::::.:::::::::::.::: ::::::::::::::::::::::::::::::::::::: gi|131 GERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENF 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 KNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLV ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 KNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLV 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 AAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 AAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLE 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 IHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 IHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFE 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 QPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVT 780 790 800 810 820 830 840 850 860 mKIAA0 STESYKETLHKTMVTRFNEAQ ::::::::::::::::::::: gi|131 STESYKETLHKTMVTRFNEAQ 840 850 >>gi|148682496|gb|EDL14443.1| mCG10403 [Mus musculus] (852 aa) initn: 3398 init1: 2458 opt: 5366 Z-score: 5096.8 bits: 954.1 E(): 0 Smith-Waterman score: 5366; 94.971% identity (97.895% similar) in 855 aa overlap (6-860:1-852) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH :::::::::::::::::::::::::::::::::::::::.::::::::: ::::: gi|148 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMEYRSYPREYGRQEGKH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 EYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQ :::::::::::::::::.::::.:::::::::::::::.::::::::::::.:::::::: gi|148 EYDDSSEEQSAEIRGQLKSHGVKAREVRLMRNKSSGQSQGFAFVEFSHLQDTTRWMEANQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 HSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCFKCGVPKSEAEQKLPLGT :::::::::::::::::.:::::.::::: ::::::::::::::::.::::::::::::: gi|148 HSLNILGQKVSMHYSDPNPKINENWLCNK-CGVQNFKRREKCFKCGMPKSEAEQKLPLGT 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPSSENANDTIILRNLNPHS :::::::::: ::::::::: :::::::::::::::::::::::::.:::::::::::: gi|148 RLDQQALPLGRRELSQGLLPQLQPYQAQGVLTSQALSQGSEPSSENASDTIILRNLNPHS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPPL ::::::::::::::::::::::::::::::::::::::::::: .::::::::::::::: gi|148 TMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV-EAAQLLQILQALHPPL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 TIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPEE ::::::::::::::::: ::::::::::::::::.::::::::::::::::::::::::: gi|148 TIDGKTINVEFAKGSKRGMASNEGSRINAASVASAAIAAAQWAISQASQGGESAWAAPEE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 PPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADSV ::.:::::::::::::::::::::::::::.:::::::::::::::.:::.::::::::: gi|148 PPLDYSYYQQDEGYGSSQGTDSLYAHGYLKDSKGPGMTGTKGDPAGAGPETSLEAGADSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 SLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAFP :::::: ::::::::::::::::.:::::::::::::::::::::.::::::.::: :.: gi|148 SLQAFSPAQPGAAPGLYQQSAEGGSGQSTATNSQSYTIISPAVLKSELQSPTHPSS-ALP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 PATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDG ::.:::: :.::::::::::::::::::::::: ::::::::: :::::::::::::::: gi|148 PASSPTALESYSQYPVPDVSTYQYDETSGYYYDSQTGLYYDPNYQYYYNAQSQQYLYWDG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 ERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFK : :::::::::::::::: ::::::::::::::::::::::::::::.::::::::::: gi|148 EWRTYIPALEQSADGHKDMRASSKEGKEKKEKHKTKTAQQIAKDMERWVRSLNKQKENFK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVA :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|148 NSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSKDLPKLASDDRPSPPRGLVA 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AYSGESDSEEKQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEI 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 HRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQ :::::::::::::::::: :::::::::::::::::::::::::::::::::.::::::: gi|148 HRRAHLSENELEALEKNDTEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISSASVDFEQ 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTS :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|148 PTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVPGSGLGARGSSYGVTS 780 790 800 810 820 830 850 860 mKIAA0 TESYKETLHKTMVTRFNEAQ :::::.:::::::::::::: gi|148 TESYKKTLHKTMVTRFNEAQ 840 850 >>gi|74148972|dbj|BAE32161.1| unnamed protein product [M (929 aa) initn: 4325 init1: 3807 opt: 5222 Z-score: 4959.5 bits: 928.9 E(): 0 Smith-Waterman score: 5475; 91.309% identity (91.416% similar) in 932 aa overlap (6-860:1-929) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 mKIAA0 EYDDSSEEQSAE------------------------------------------------ :::::::::::: gi|741 EYDDSSEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEE 60 70 80 90 100 110 80 90 100 mKIAA0 -----------------------------IRGQLQSHGVQAREVRLMRNKSSGQSRGFAF ::::::::::::::::::::::::::::::: gi|741 EEEDEEEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAF 120 130 140 150 160 170 110 120 130 140 150 160 mKIAA0 VEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCF :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|741 VEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCF 180 190 200 210 220 230 170 180 190 200 210 220 mKIAA0 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS 240 250 260 270 280 290 230 240 250 260 270 280 mKIAA0 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI- 300 310 320 330 340 350 290 300 310 320 330 340 mKIAA0 VRAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 -EAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA 360 370 380 390 400 410 350 360 370 380 390 400 mKIAA0 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD 420 430 440 450 460 470 410 420 430 440 450 460 mKIAA0 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV 480 490 500 510 520 530 470 480 490 500 510 520 mKIAA0 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN 540 550 560 570 580 590 530 540 550 560 570 580 mKIAA0 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK 600 610 620 630 640 650 590 600 610 620 630 640 mKIAA0 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL 660 670 680 690 700 710 650 660 670 680 690 700 mKIAA0 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA 720 730 740 750 760 770 710 720 730 740 750 760 mKIAA0 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 780 790 800 810 820 830 770 780 790 800 810 820 mKIAA0 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 840 850 860 870 880 890 830 840 850 860 mKIAA0 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ ::::::::::::::::::::::::::::::::::::: gi|741 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 900 910 920 >>gi|81880120|sp|Q99KG3.1|RBM10_MOUSE RecName: Full=RNA- (930 aa) initn: 4331 init1: 3813 opt: 5189 Z-score: 4928.2 bits: 923.1 E(): 0 Smith-Waterman score: 5482; 91.416% identity (91.524% similar) in 932 aa overlap (6-860:1-930) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 mKIAA0 EYDDSSEEQSAE------------------------------------------------ :::::::::::: gi|818 EYDDSSEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEE 60 70 80 90 100 110 80 90 100 mKIAA0 -----------------------------IRGQLQSHGVQAREVRLMRNKSSGQSRGFAF ::::::::::::::::::::::::::::::: gi|818 EEEDEEEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAF 120 130 140 150 160 170 110 120 130 140 150 160 mKIAA0 VEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCF :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|818 VEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCF 180 190 200 210 220 230 170 180 190 200 210 220 mKIAA0 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS 240 250 260 270 280 290 230 240 250 260 270 280 mKIAA0 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV 300 310 320 330 340 350 290 300 310 320 330 340 mKIAA0 VRAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 -EAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA 360 370 380 390 400 410 350 360 370 380 390 400 mKIAA0 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD 420 430 440 450 460 470 410 420 430 440 450 460 mKIAA0 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV 480 490 500 510 520 530 470 480 490 500 510 520 mKIAA0 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN 540 550 560 570 580 590 530 540 550 560 570 580 mKIAA0 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK 600 610 620 630 640 650 590 600 610 620 630 640 mKIAA0 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL 660 670 680 690 700 710 650 660 670 680 690 700 mKIAA0 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA 720 730 740 750 760 770 710 720 730 740 750 760 mKIAA0 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 780 790 800 810 820 830 770 780 790 800 810 820 mKIAA0 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 840 850 860 870 880 890 830 840 850 860 mKIAA0 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ ::::::::::::::::::::::::::::::::::::: gi|818 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 900 910 920 930 >>gi|74219368|dbj|BAE26813.1| unnamed protein product [M (930 aa) initn: 4325 init1: 3813 opt: 5183 Z-score: 4922.5 bits: 922.0 E(): 0 Smith-Waterman score: 5476; 91.309% identity (91.524% similar) in 932 aa overlap (6-860:1-930) 10 20 30 40 50 60 mKIAA0 NSYQDMEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MEYERRGGRGDRTGRYGATDRSQDDSGENRSRDHDYRDMDYRSYPREYGSQEGKH 10 20 30 40 50 70 mKIAA0 EYDDSSEEQSAE------------------------------------------------ :::::::::::: gi|742 EYDDSSEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEE 60 70 80 90 100 110 80 90 100 mKIAA0 -----------------------------IRGQLQSHGVQAREVRLMRNKSSGQSRGFAF ::::::::::::::::::::::::::::::: gi|742 EEEDEEEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAF 120 130 140 150 160 170 110 120 130 140 150 160 mKIAA0 VEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKQCGVQNFKRREKCF ::::::::::::.::::::::::::::::::::::::::::::::: ::::::::::::: gi|742 VEFSHLQDATRWVEANQHSLNILGQKVSMHYSDPKPKINEDWLCNK-CGVQNFKRREKCF 180 190 200 210 220 230 170 180 190 200 210 220 mKIAA0 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQGVLTSQALSQGSEPS 240 250 260 270 280 290 230 240 250 260 270 280 mKIAA0 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIV 300 310 320 330 340 350 290 300 310 320 330 340 mKIAA0 VRAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 -EAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWA 360 370 380 390 400 410 350 360 370 380 390 400 mKIAA0 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ISQASQGGESAWAAPEEPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGD 420 430 440 450 460 470 410 420 430 440 450 460 mKIAA0 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PAGTGPEASLEAGADSVSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAV 480 490 500 510 520 530 470 480 490 500 510 520 mKIAA0 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LKAELQSPTQPSSSAFPPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPN 540 550 560 570 580 590 530 540 550 560 570 580 mKIAA0 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SQYYYNAQSQQYLYWDGERRTYIPALEQSADGHKDTGASSKEGKEKKEKHKTKTAQQIAK 600 610 620 630 640 650 590 600 610 620 630 640 mKIAA0 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DMERWARSLNKQKENFKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDL 660 670 680 690 700 710 650 660 670 680 690 700 mKIAA0 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEA 720 730 740 750 760 770 710 720 730 740 750 760 mKIAA0 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 780 790 800 810 820 830 770 780 790 800 810 820 mKIAA0 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 840 850 860 870 880 890 830 840 850 860 mKIAA0 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ ::::::::::::::::::::::::::::::::::::: gi|742 VRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 900 910 920 930 860 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:03:17 2009 done: Thu Mar 12 23:11:53 2009 Total Scan time: 1129.610 Total Display time: 0.440 Function used was FASTA [version 34.26.5 April 26, 2007]