FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0515.ptfa, 915 aa vs ./tmplib.26680 library 1768102 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.8049+/-0.00745; mu= 2.5547+/- 0.493 mean_var=371.2405+/-89.918, 0's: 0 Z-trim: 8 B-trim: 0 in 0/36 Lambda= 0.0666 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1096 ( 2062 res) mbg00585 (2062) 533 66 4.9e-11 >>mKIAA1096 ( 2062 res) mbg00585 (2062 aa) initn: 501 init1: 275 opt: 533 Z-score: 290.4 bits: 66.2 E(): 4.9e-11 Smith-Waterman score: 620; 30.277% identity (34.899% ungapped) in 687 aa overlap (1-647:1407-2042) 10 20 mKIAA0 RHAKPPRFRRLRQERESLG----LWGPEEE :. ::::::::: :::. . . : . mKIAA1 IPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLR-EREAASKTSEVLVPSNG 1380 1390 1400 1410 1420 1430 30 40 50 60 70 80 mKIAA0 SHLLASQWPGRSKLCPGDKSGPGGHRSPELSYQNSSDHANEEWETASESSDFSERRERRE . . : : :.: :: ...:.:: :::::.::::::::::::::.::::: : mKIAA1 TANNVVQEPVNP---PADISG---NKTPDLSNQNSSDQANEEWETASESSDFNERRERDE 1440 1450 1460 1470 1480 90 100 110 120 130 140 mKIAA0 GLVAEPEAQGDGGLSGSSLGEKKELAKRSFSSQRPLADRQSRKLEPGGFGEKPVRPGGGE :. .:. . : : :.:.:::::::::: .:::.:. . : : . : . mKIAA1 KKNADMSSQAVVKAGESVLPPKREIAKRSFSSQRPGVDRQNRRGNNG-----PPKSGRNF 1490 1500 1510 1520 1530 1540 150 160 170 180 190 200 mKIAA0 PSPRCESQQSGTPLKV-KRSPDEALPGGLGSHSPYALERTTHASS--DGPETPSKKS--- .:: : ...: : : ::.: . .: .. .: . . . : . .: ..:. mKIAA1 SGPRNE-RRNGPPSKGGKRGPFDDQASGTAGADPVSGNSAHHQEGVPNGAGQKNSKDAAG 1550 1560 1570 1580 1590 1600 210 220 230 240 250 mKIAA0 -EREVSLP-TQRASEQEEARKQFDLG-YGNA-LIDNCASSPGEENEASSVVGEGFIEVLT .:: . : .. .:. .: .::::. :... .::. :. :.. .:: ::.. mKIAA1 KKREDTKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVVS 1610 1620 1630 1640 1650 1660 260 270 280 290 300 mKIAA0 KKQ-RRLLEEERRKKE-QAAQV------PVKGRGLSSRIPPRFAKKQ-NGLCLEQ---DV ::: .:: .::::::: :..:: :::. .:..:::::::: .: : .. mKIAA1 KKQQKRLQDEERRKKEEQVVQVWSKKNIGEKGRSQTSKLPPRFAKKQATGTQQIQAPPSA 1670 1680 1690 1700 1710 1720 310 320 330 340 350 mKIAA0 TVPGSSLGTEIWENSSQA-----LPVQGAASDSWRTAVTAFSSTEP--GTSEGFKSSQGD :: :: . . .. : :: :: ::.. :. : . . .... mKIAA1 PVPVSSSAPGLTAPAAAAPASTPAPVPILASA---TALVPVSTPAPVLTSCPAPVPTSAS 1730 1740 1750 1760 1770 1780 360 370 380 390 400 410 mKIAA0 SGVDLSAESRESSATSSQRSSPYGTLKPEEISGPGLAESKADSHKDQAQKQAEHKDSEQG . : :. : ....::: : : : : :: : . . . .: .. mKIAA1 APVPASTSSPVTASSSSQPSVPAPT--------PVLA-SASTTVSVPILTSASIPILASA 1790 1800 1810 1820 1830 420 430 440 450 460 470 mKIAA0 SAQSKEHRPGPIGNERSLKNRKGSEGAERLPGAVVP--PVNGVEIHVDSVLPVPPIEFGV : . : :. . .. . . : : :: :.... :..: : .. .. mKIAA1 LAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAA-----STVPPPGLD-SA 1840 1850 1860 1870 1880 480 490 500 510 520 530 mKIAA0 SPKDSDFSLPPGSVSGPVGNPVAKLQDVLASNAGLTQSIPILRRDHHMQRAIGLSPMSFP .: : : . : :. : .. ... : .: :: .:.: . . . : .. : mKIAA1 DP-DPDPQTSPESTRLPSAQ-TSNGTDFVA--AG--KSMPTSQSHGSLTAELWDSKVAAP 1890 1900 1910 1920 1930 540 550 560 570 580 590 mKIAA0 TA--DLTLKMESARKAWENSPSLPEQSSPGGAGSGIQPPSSVGA---SNGVNYSSFGGVS .. :.. :. .: : : : .... .: .: :. :.:. .. .:: mKIAA1 AVLNDISKKL---------GPISPPQ--PPSVSAWNKPLTSFGSATSSEGTRNGQESGVE 1940 1950 1960 1970 1980 600 610 620 630 640 650 mKIAA0 MPPMPVASVAPSASIPGSHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAATAQQIPISL . . ::... ... :. :. .. . :. :. :.: ::..: mKIAA1 IGIDTIQFGAPASNGNENEVVPV-LSEKATDKVPE--PKEQRQKQPRAGPIKAQKLPDLS 1990 2000 2010 2020 2030 2040 660 670 680 690 700 710 mKIAA0 HTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYS mKIAA1 LVENKEHKPGPIGKERS 2050 2060 915 residues in 1 query sequences 1768102 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:04 2006 done: Mon Mar 27 10:22:05 2006 Scan time: 1.000 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]