FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0657.ptfa, 782 aa vs ./tmplib.26680 library 1768235 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8371+/-0.00505; mu= 17.4460+/- 0.337 mean_var=105.1504+/-24.538, 0's: 0 Z-trim: 10 B-trim: 136 in 1/35 Lambda= 0.1251 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1355 ( 1189 res) mpm05201 (1189) 211 49 2.7e-06 mKIAA3016 ( 714 res) mph00541 ( 714) 165 41 0.00063 mKIAA0364 ( 1026 res) mph01359 (1026) 163 41 0.001 mFLJ00376 ( 931 res) mbg07794 ( 931) 161 40 0.0012 mKIAA4170 ( 1376 res) mbg21326 (1376) 159 40 0.002 mKIAA0230 ( 1431 res) mbg10262 (1431) 155 39 0.0033 >>mKIAA1355 ( 1189 res) mpm05201 (1189 aa) initn: 110 init1: 82 opt: 211 Z-score: 205.4 bits: 49.4 E(): 2.7e-06 Smith-Waterman score: 300; 24.366% identity (29.070% ungapped) in 513 aa overlap (68-525:45-529) 40 50 60 70 80 90 mKIAA0 ERAYFTVTITDVFSWIVYPSSEVHVAAVRLERVVLTCELCRPWAE-----VRWTKDGEEV : .:: :.: : .. ..: . : . mKIAA1 LRLTVLSLIISQGADGRRKPEVVSVVGRAGESAVLGCDLLPPAGRPPLHVIEWLRFGFLL 20 30 40 50 60 70 100 110 120 130 mKIAA0 -------VESPALLLEKEDTIR-----RLVLPSVQLEDSGEYLCEI-----HDESASFT- . :: . . .: : . ....::.: : :.. :. .:. mKIAA1 PIFIQFGLYSPRIDPDYVGRVRLQTGASLQIEGLRVEDQGWYECRVLFLDQHSPEQDFAN 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 -----ITVTEPPVRIIYPQDEVTLHAVSLECVVLTCELSREDAP-VRWYKDGLEVEESEA .::. :: : ..:.. :: :.: : : : : : .. .... mKIAA1 GSWVHLTVNSPPQFQETPP--LVLEVKELEAVTLRCVARGSPQPYVTWKFRGQDLGKGQG 140 150 160 170 180 190 190 200 210 220 230 240 mKIAA0 LVLQSDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFT----VTVTAPPERIVHPAARSLD : ..: : . .. ..:...:.:... . .: . : .:: .: :. ... mKIAA1 QVQVQNGT---LWIRRVERGSAGDYTCQASSSEGSITHATQLLVLGPPVIVVPPSNSTVN 200 210 220 230 240 250 260 270 280 290 mKIAA0 LQFGAPGHVELRC--EVAPAGSQVRWYKDGLEV----EVSDALQLGAEGPARTLTLPHAQ . : : : :. ::. :..::..: .... ... ..: .: : .: mKIAA1 ----SSQDVSLACRAEAYPANLTYSWFQDGVNVFHISRLQSRVRILVDG---SLWLQATQ 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 PEDAGEYVCETRDEAVTFNVSLAELPVQFLAPEAAPNPLCVVP-GEPVVLSCELSRASAQ :.:::.:.: . . . : : : . : .. : .: : :. : . mKIAA1 PDDAGHYTCVPSNGFLHPPSASAYLTVLYPAQVTVMPPETPLPTGMRGVIRCPVRANPPL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 VF--WSHNGSPVQQGE--GLELRAEGPRRILCIQAADLAHTGVYTCQSGASPG--APSLS .: :...:. .: . : : ::. : : .. : :.: : : .:: mKIAA1 LFVTWTKDGQALQLDKFPGWSL---GPEGSLIIALGNEDALGEYSCTPYNSLGTAGPSPV 370 380 390 400 410 420 430 440 450 460 mKIAA0 FNVQVAEPPVRVVAP--EAAQTSVRSTPGGDLELVVHLSRPGTP---VRWYKDGERLASQ : . ::. . : : : : ::.. : : : : : : :. : : mKIAA1 TRVLLKAPPAFIDQPKEEYFQEVGR-------ELLIPCSARGDPPPIVSWAKVGRGL--Q 420 430 440 450 460 470 470 480 490 500 510 520 mKIAA0 GRVQLEQAGARQVLRVRGARRGDAGEYLCDAPQD-SRIFI---VSVEGNHAPLIPTKTTS :..:... .. : .: . :.. :.: . .:. : : :. .: . :... mKIAA1 GQAQVDSNNS---LVLRPLTKEAQGRWECSASNAVARVTTSTNVYVLGT-SPHVVTNVSV 480 490 500 510 520 530 540 550 560 570 580 mKIAA0 HPLDPFHLLYLTQLLSMVPTNAFMTVTVRGHLPFFQHPSIAGCIAQWIKRRTLESTCPGC :: mKIAA1 VPLPKGANVSWEPGFDGGYLQRFSVWYTPLAKRPDRAHHDWVSLAVPIGATHLLVPGLQA 530 540 550 560 570 580 >>mKIAA3016 ( 714 res) mph00541 (714 aa) initn: 90 init1: 62 opt: 165 Z-score: 162.9 bits: 40.8 E(): 0.00063 Smith-Waterman score: 178; 21.993% identity (24.060% ungapped) in 291 aa overlap (146-420:104-385) 120 130 140 150 160 mKIAA0 LEDSGEYLCEIHDESASFTITVTEPPVRIIYPQDEVTLH-----AVSLECVVLTCEL-SR .:. ..:.. :.. : .:: : mKIAA3 SFVNASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQSAIKGSDVSFTCSAASS 80 90 100 110 120 130 170 180 190 200 210 220 mKIAA0 EDAPVR--WYKDGLEVEESEALVLQSDGPRRRLVLPAAQPEDGGEFVCDAGDD-SAFFTV :.:. : ::. ....: ... . : . . :.. : .. .. ..: mKIAA3 SDSPMTFAWKKDNEALQDAE---MENYAHLRAQGGELMEFTSEGKYQCVISNHFGSSYSV 140 150 160 170 180 190 230 240 250 260 270 280 mKIAA0 TVTAPPERIVHPAARSLDLQFGAPGHVELRCE-VAPAGSQVRWYKDG-LEVEVSDALQLG . . . . .:: . : . ..:.: :. . :. : ::: . .. .. mKIAA3 KAKLTINMLPSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDGGTDFPAARERRMH 200 210 220 230 240 250 290 300 310 320 330 340 mKIAA0 AEGPARTLTLPHAQPEDAGEYVCETRDEA--VTFNVSLA--ELPVQFLAPEAAPNPLCVV . .. . .. :: : : : ... : :. :..:. : : .:: : . :. mKIAA3 VMPEDDVFFIVDVKIEDIGVYSCTAQNSAGSVSANATLTVLETP-SFLRPLLDRT---VT 260 270 280 290 300 350 360 370 380 390 mKIAA0 PGEPVVLSC-ELSRASAQVFWSHNGSPVQQGEGLELRAEGPRRILCIQAADLAHTGVYTC :: .::.: . .. :... ::. : .. : : ..: : .:.. .: ::: mKIAA3 KGETAVLQCIAGGSPPPRLNWTKDDSPLVVTER-HFFAAG-NQLLIIVDSDVSDAGKYTC 310 320 330 340 350 360 400 410 420 430 440 450 mKIAA0 QSGASPGAPSLSFNVQVAEPPVRVVAPEAAQTSVRSTPGGDLELVVHLSRPGTPVRWYKD . . . :. . ..: :. mKIAA3 EMSNTLGTERGNVRLSVIPTPTCDSPHMTAPSLDGDGWATVGVVIIAVVCCVVGTSLVWV 370 380 390 400 410 420 >>mKIAA0364 ( 1026 res) mph01359 (1026 aa) initn: 125 init1: 65 opt: 163 Z-score: 159.2 bits: 40.7 E(): 0.001 Smith-Waterman score: 192; 24.314% identity (27.679% ungapped) in 255 aa overlap (253-495:681-916) 230 240 250 260 270 280 mKIAA0 FFTVTVTAPPERIVHPAARSLDLQFGAPGHVELRCEVAPAGSQVRWYKDGLEVEVSDALQ ...::. : :: : . :. : mKIAA0 SEPSEALELVGTDILPKPVISASLPIRGQELQIRCKGWLEGLGFALYKKGEQEPVQ---Q 660 670 680 690 700 290 300 310 320 330 mKIAA0 LGAEGPARTLTLPHAQPEDAGEYVCETRDEAVTFNVSLAELPVQFLAPEAAPNPL----- ::: : .:. . . .: :.: :.:. : :. : :.... : :.:. mKIAA0 LGAVGREAFFTIQRMEDKDEGNYSCRTHTEMQPFKWSEPSEPLELVIKEMYPKPFFKTWA 710 720 730 740 750 760 340 350 360 370 380 390 mKIAA0 --CVVPGEPVVLSCELSRASAQVFWSHNGSPVQQGEGLELRAEGPRRILCIQAADLAHTG :.:: :...: :. . . ..:. . ... : . : .. .. : mKIAA0 SPVVTPGSRVTFNCSTSHEHMSFILYKDGNEIASSDLAWGNPGGSTAHFLIISVGIGDGG 770 780 790 800 810 820 400 410 420 430 440 450 mKIAA0 VYTCQSGASPGAPSLSFNVQVAEP--PVRVVAPE---AAQTSVRSTPGGDLELVVHLSRP :.:. .:.. .:: ::..:. : .. :: :. : . : mKIAA0 NYSCRY--------YDFSIW-SEPSNPVELVVTEFYPKPTLLAQPGPGKDITLQCRGPLP 830 840 850 860 870 460 470 480 490 500 510 mKIAA0 GTPVRWYKDGERLASQGRVQLEQAGARQVLRVRGARRGDAGEYLCDAPQDSRIFIVSVEG :. .:::. : : :. . : . ..: .: :.: :. mKIAA0 GVEFVLEHDGEE-APQ---QFSEDGDFVIDNLEG--KG-IGNYSCSYRLQAYPDIWSEPS 880 890 900 910 920 930 520 530 540 550 560 570 mKIAA0 NHAPLIPTKTTSHPLDPFHLLYLTQLLSMVPTNAFMTVTVRGHLPFFQHPSIAGCIAQWI mKIAA0 DTLELVGAAGPVAQECTVGNIVRSTLIVVVVVALGIVLAVEWKKWPRLRTRGSETDGRDQ 940 950 960 970 980 990 >>mFLJ00376 ( 931 res) mbg07794 (931 aa) initn: 109 init1: 70 opt: 161 Z-score: 157.7 bits: 40.2 E(): 0.0012 Smith-Waterman score: 197; 27.559% identity (32.864% ungapped) in 254 aa overlap (117-344:11-249) 90 100 110 120 130 mKIAA0 KDGEEVVESPALLLEKEDTIRRLVLPSVQLEDSGEYLC--------EIHDESASFTITV- :: : : : :.. ... . : mFLJ00 GNLQIVNASQEDEGMYKCAAYNPVTQEVKTSGSGDRLRVR 10 20 30 40 140 150 160 170 180 190 mKIAA0 --TEPPVRIIYPQDEVTLHAVSLECVVLTCELSREDAP-VRWYKDGLEVEE-SEALVLQS : .::::: . :. ... . ..: : : : : : ::: . ... : : mFLJ00 RSTAEAARIIYPLEAQTVIVTKGQSLILECVASGIPPPRVTWAKDGSSIAAYNKTRFLLS 50 60 70 80 90 100 200 210 220 230 240 mKIAA0 DGPRRRLVLPAAQPEDGGEFVCDA----GDDSA---FFTVTVTAPPERIVHPAARSLDLQ . :.. ... ::.: . : : :: .: ...: : ::: :. . .: . mFLJ00 N-----LLIDTTSEEDSGTYRCMASNGVGDPGAAVILYNVQVFEPPEVTVELS--QLVIP 110 120 130 140 150 250 260 270 280 290 300 mKIAA0 FGAPGHVELRCEV--APAGSQVRWYKDGLEVEVSDALQLGAEGPARTLTLPHAQPEDAGE .: . .: ::: : : : : .... . :. :.:. :.: . . ::: : mFLJ00 WGQSA--KLTCEVRGNPPPS-VLWLRNAVPLTSSQRLRLSR----RALRVVSVGPEDEGV 160 170 180 190 200 310 320 330 340 350 360 mKIAA0 YVCETRDEAVTFNVSLAEL----PVQFLAPEAAPNPLCVVPGEPVVLSCELSRASAQVFW : : ... :: ....: : : : .:. ..: : mFLJ00 YQCMAEN-AVGSAHAVVQLRTARPDTTLRPGRDTKPIAATPPMPPSRPSRPDQMLREQPG 210 220 230 240 250 260 370 380 390 400 410 420 mKIAA0 SHNGSPVQQGEGLELRAEGPRRILCIQAADLAHTGVYTCQSGASPGAPSLSFNVQVAEPP mFLJ00 LVKPPTSVQSTSLKCPGEEQVAPAEAPIILSSPRTSKTDSYELVWRPRHEGSSRTPILYY 270 280 290 300 310 320 >>mKIAA4170 ( 1376 res) mbg21326 (1376 aa) initn: 316 init1: 115 opt: 159 Z-score: 154.0 bits: 40.1 E(): 0.002 Smith-Waterman score: 173; 23.161% identity (26.984% ungapped) in 367 aa overlap (163-511:261-593) 140 150 160 170 180 190 mKIAA0 FTITVTEPPVRIIYPQDEVTLHAVSLECVVLTCELSREDAPVRWYKDGLEVEESEALVLQ :: . : ..:. :. . : ..: . : mKIAA4 RIRPRACKNHKSKTESQNKVLQENSPTFSDLTERRERASVPIPIPADSRDNELNHA-IEQ 240 250 260 270 280 200 210 220 230 240 250 mKIAA0 SDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTAPPERIVHPAARSLDLQFGAPGH .. ::. : :.. .:. . .. .: .. . :: :... :: .. :. . mKIAA4 REAKRREAELAAGEAA-AGDSTPGSSPSSLYYEEPLGQPP-RFTQKL-RSREVPEGS--R 290 300 310 320 330 340 260 270 280 290 300 310 mKIAA0 VELRCEVAPAGS-QVRWYKDGLEVEVSDALQLGAEGPARTLTLPHAQPEDAGEYVCETRD :.: : :. ::::: .: :.: : ... : ..::. .: ::.:.: : . . mKIAA4 VQLDCIVVGIPPPQVRWYCEGKELENSPDIHIVQAGNLHSLTIAEAFEEDTGRYSCFASN 350 360 370 380 390 400 320 330 340 350 360 370 mKIAA0 EAVTFNVSLAELPVQFLAPEAAPNPLCVVPGEPVVLSCELSRASAQVFWSHNGSPVQQGE : ..: ::. .. .. . :.: . :..: . .. .:: . mKIAA4 IYGTDSTS-AEIYIEGVSSSDSE-------GDPN--KEEMNRIQKP---NEVSSPPTTSA 410 420 430 440 450 380 390 400 410 420 430 mKIAA0 GLELRAEG-PRRILCIQAADLAHTGVYTCQSGASPGAPSLSFNVQVAEPPVRVVAPEAAQ .. ::. : ::. . : ::: :. .. ..: ..: . mKIAA4 AIPPAAEAQP------LAAQPRVSTVQQCQS------PTNYLQGLNGKP---IIAAPVFT 460 470 480 490 440 450 460 470 mKIAA0 TSVRSTPGGDLELVVHLSR----PGTPVRWYKDGERLASQGRVQLEQAGARQV------- ... ... .::: : :. :.::..: . .. .. : :.. mKIAA4 KMLQNLSASEGQLVVFECRVKGAPSPKVEWYREGTLIEDSPDFRILQKKPRSMAEPEEIC 500 510 520 530 540 550 480 490 500 510 520 530 mKIAA0 -LRVRGARRGDAGEYLCDAPQD----SRIFIVSVEGNHAPLIPTKTTSHPLDPFHLLYLT : . . :.: . : : . : : ..:.::. mKIAA4 TLVIAEVFSEDSGCFTCTASNKYGTVSSIAQLDVRGNEDISDNGALHSANSTTNPAVAEH 560 570 580 590 600 610 540 550 560 570 580 590 mKIAA0 QLLSMVPTNAFMTVTVRGHLPFFQHPSIAGCIAQWIKRRTLESTCPGCTYSCVVGTARSE mKIAA4 QPSPLNPQPLSEEQPPKPKLEGVLVNHNEPRSSSRIGLRVHFNLPEDDKDMEASSGSGAA 620 630 640 650 660 670 >>mKIAA0230 ( 1431 res) mbg10262 (1431 aa) initn: 114 init1: 54 opt: 155 Z-score: 149.9 bits: 39.4 E(): 0.0033 Smith-Waterman score: 260; 25.180% identity (29.248% ungapped) in 417 aa overlap (70-453:216-607) 40 50 60 70 80 90 mKIAA0 AYFTVTITDVFSWIVYPSSEVHVAAVRLERVVLTCELC-RPWAEVRWTKDGEEV-VESPA : .::. : :. : ....:. ... . mKIAA0 VATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDS 190 200 210 220 230 240 100 110 120 130 140 mKIAA0 LLLEKEDTIRRLVLPSVQLEDSGEYLC---EIHDESASFTITVT---EP--PVRIIYPQD : .: :.. ..: : : : : .. :. . .:. : :. .: ::. mKIAA0 RLNLLDDGT--LMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRYLGSPARPTFVIQPQN 250 260 270 280 290 300 150 160 170 180 190 200 mKIAA0 EVTLHAVSLECVVLTCELSREDAP-VRWYK-DGLEVE-ESEALVLQSDGPRRRLVLPAAQ .: . : :.: : . . : . : . : . . .. . : : : . . mKIAA0 TEVLVG---ESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG----LYIQNVA 310 320 330 340 350 210 220 230 240 250 mKIAA0 PEDGGEFVCDAGD--DSAFFT--VTVTAPPERIVHPAAR------SLDLQFGAPGHVELR :.::..: :.. :: : . : : :. : : .: ..:.: .: :: . mKIAA0 QSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCAAKGHPQ-- 360 370 380 390 400 410 260 270 280 290 300 310 mKIAA0 CEVAPAGSQVRWYKDGLEVEVSDALQLGAEGPARTLTLPHAQPEDAGEYVCETRDEAVTF :. . : : : .. :. . . : :: . . .: :.: :.. . . mKIAA0 ----PV---IAWTKGGSQLSVDRRHLVLSSG---TLRISGVALHDQGQYECQAVNIIGSQ 420 430 440 450 460 320 330 340 350 360 370 mKIAA0 NVSLAELPVQ-FLAPEAA--PNPLCVVPGEPVVLSCE-LSRASAQVFWSHNGSPVQQGEG .: .:.: :: ..: : :. . : : : : : .. . :...: : .. mKIAA0 KV-VAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGK 470 480 490 500 510 520 380 390 400 410 420 430 mKIAA0 LELRAEGPRRILCIQAADLAHTGVYTCQSGASPGAPSLSFNVQVAEPPV-RVVAPEAAQT ... :: .: :. . : .: : : . . : :.:. ..: : : : : .: . mKIAA0 FHISPEG---FLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVPDVSRNGDPYVATS 530 540 550 560 570 580 440 450 460 470 480 mKIAA0 SVRSTPGGDLELV---VHL--SRPGTPVRWYKDGERLASQGRVQLEQAGARQVLRVRGAR :.. : . .:: ::: .: mKIAA0 IVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVGQARAGEIFERTLQLIQ 590 600 610 620 630 640 782 residues in 1 query sequences 1768235 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:25:33 2006 done: Mon Mar 27 10:25:35 2006 Scan time: 0.920 Display time: 0.200 Function used was FASTA [version 3.4t11 Apr 17, 2002]