# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg04582.fasta.nr -Q ../query/mKIAA4067.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4067, 245 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921240 sequences Expectation_n fit: rho(ln(x))= 5.1443+/-0.00018; mu= 9.2664+/- 0.010 mean_var=68.5459+/-13.339, 0's: 43 Z-trim: 45 B-trim: 0 in 0/67 Lambda= 0.154911 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|19353608|gb|AAH24533.1| Atg2b protein [Mus musc ( 419) 1417 325.2 1.1e-86 gi|114325437|gb|AAH46427.3| Atg2b protein [Mus mus ( 908) 1417 325.4 2e-86 gi|148686809|gb|EDL18756.1| mCG1151, isoform CRA_c ( 975) 1417 325.4 2.1e-86 gi|205371779|sp|Q80XK6.3|ATG2B_MOUSE RecName: Full (2075) 1417 325.6 3.8e-86 gi|59808210|gb|AAH89882.1| RGD1304878 protein [Rat ( 820) 1410 323.8 5.4e-86 gi|118341317|gb|AAH62182.1| Atg2b protein [Mus mus (2075) 1414 325.0 6.1e-86 gi|149044218|gb|EDL97600.1| rCG27761, isoform CRA_ (1014) 1410 323.8 6.4e-86 gi|62914010|gb|AAH15016.3| ATG2B protein [Homo sap ( 775) 1391 319.5 9.8e-85 gi|73964446|ref|XP_537549.2| PREDICTED: similar to (1893) 1392 320.0 1.7e-84 gi|109084826|ref|XP_001101467.1| PREDICTED: hypoth (2053) 1391 319.8 2.1e-84 gi|205371799|sp|Q96BY7.4|ATG2B_HUMAN RecName: Full (2078) 1391 319.8 2.2e-84 gi|194225344|ref|XP_001489245.2| PREDICTED: ATG2 a (2025) 1388 319.1 3.4e-84 gi|114654809|ref|XP_510152.2| PREDICTED: hypotheti (2065) 1387 318.9 4e-84 gi|34535570|dbj|BAC87363.1| unnamed protein produc ( 909) 1380 317.1 6.1e-84 gi|7022159|dbj|BAA91504.1| unnamed protein product ( 662) 1376 316.1 8.8e-84 gi|126290281|ref|XP_001367893.1| PREDICTED: hypoth (2074) 1343 309.1 3.6e-81 gi|149636910|ref|XP_001512043.1| PREDICTED: hypoth (2088) 1343 309.1 3.7e-81 gi|118092150|ref|XP_421350.2| PREDICTED: hypotheti (2043) 1309 301.5 7e-79 gi|169641920|gb|AAI60599.1| Unknown (protein for I ( 714) 1269 292.2 1.5e-76 gi|114107628|gb|AAI23023.1| Atg2b protein [Xenopus ( 898) 1269 292.3 1.8e-76 gi|117558609|gb|AAI27335.1| ATG2 autophagy related (2067) 1269 292.5 3.5e-76 gi|12846123|dbj|BAB27040.1| unnamed protein produc ( 185) 1197 275.7 3.5e-72 gi|149044219|gb|EDL97601.1| rCG27761, isoform CRA_ ( 185) 1193 274.9 6.6e-72 gi|194687192|ref|XP_587455.4| PREDICTED: similar t ( 179) 1127 260.1 1.8e-67 gi|210123457|gb|EEA71158.1| hypothetical protein B (2114) 1004 233.3 2.4e-58 gi|210123461|gb|EEA71162.1| hypothetical protein B (2813) 1004 233.4 3e-58 gi|123884534|sp|Q08D51.1|ATG2A_XENTR RecName: Full (1997) 993 230.9 1.2e-57 gi|211828260|gb|AAH56482.2| Atg2a protein [Mus mus (1145) 989 229.8 1.5e-57 gi|149062166|gb|EDM12589.1| rCG47388 [Rattus norve (1916) 990 230.2 1.9e-57 gi|123782224|sp|Q6P4T0.2|ATG2A_MOUSE RecName: Full (1914) 989 229.9 2.2e-57 gi|148701284|gb|EDL33231.1| RIKEN cDNA 1810013C15, (1916) 989 229.9 2.2e-57 gi|119919243|ref|XP_608267.3| PREDICTED: similar t (1938) 989 229.9 2.3e-57 gi|166831568|gb|ABY90104.1| ATG2 autophagy related ( 332) 979 227.2 2.6e-57 gi|14250327|gb|AAH08593.1| ATG2A protein [Homo sap ( 519) 979 227.3 3.7e-57 gi|73983728|ref|XP_540877.2| PREDICTED: similar to (1960) 984 228.8 4.9e-57 gi|31565581|gb|AAH53596.1| ATG2A protein [Homo sap ( 752) 979 227.4 5e-57 gi|169731507|gb|ACA64880.1| ATG2 autophagy related (1865) 979 227.7 1e-56 gi|164612482|gb|ABY63643.1| ATG2 autophagy related (1907) 979 227.7 1.1e-56 gi|83404910|gb|AAI10651.1| ATG2 autophagy related (1938) 979 227.7 1.1e-56 gi|166221314|sp|Q2TAZ0.2|ATG2A_HUMAN RecName: Full (1938) 979 227.7 1.1e-56 gi|109105558|ref|XP_001114733.1| PREDICTED: simila (1938) 979 227.7 1.1e-56 gi|109730269|gb|AAI13092.1| ATG2A protein [Homo sa ( 331) 941 218.7 9.4e-55 gi|156212694|gb|EDO33743.1| predicted protein [Nem ( 891) 933 217.2 7.1e-54 gi|110756810|ref|XP_001122229.1| PREDICTED: simila (1976) 932 217.2 1.6e-53 gi|212512083|gb|EEB14915.1| conserved hypothetical (2022) 925 215.7 4.7e-53 gi|115913940|ref|XP_792926.2| PREDICTED: hypotheti (2119) 923 215.2 6.7e-53 gi|47230192|emb|CAG10606.1| unnamed protein produc (1976) 899 209.8 2.6e-51 gi|198418721|ref|XP_002123321.1| PREDICTED: simila (1902) 861 201.3 9.1e-49 gi|108880660|gb|EAT44885.1| conserved hypothetical ( 895) 847 198.0 4.4e-48 gi|167877818|gb|EDS41201.1| autophagy-specific gen (1978) 840 196.7 2.4e-47 >>gi|19353608|gb|AAH24533.1| Atg2b protein [Mus musculus (419 aa) initn: 1417 init1: 1417 opt: 1417 Z-score: 1712.8 bits: 325.2 E(): 1.1e-86 Smith-Waterman score: 1417; 100.000% identity (100.000% similar) in 218 aa overlap (28-245:202-419) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::::::::::::::::::::::::::::: gi|193 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGG 180 190 200 210 220 230 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 240 250 260 270 280 290 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 300 310 320 330 340 350 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES 360 370 380 390 400 410 240 mKIAA4 QKWRHGED :::::::: gi|193 QKWRHGED >>gi|114325437|gb|AAH46427.3| Atg2b protein [Mus musculu (908 aa) initn: 1417 init1: 1417 opt: 1417 Z-score: 1708.0 bits: 325.4 E(): 2e-86 Smith-Waterman score: 1417; 100.000% identity (100.000% similar) in 218 aa overlap (28-245:691-908) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::::::::::::::::::::::::::::: gi|114 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGG 670 680 690 700 710 720 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 730 740 750 760 770 780 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 790 800 810 820 830 840 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES 850 860 870 880 890 900 240 mKIAA4 QKWRHGED :::::::: gi|114 QKWRHGED >>gi|148686809|gb|EDL18756.1| mCG1151, isoform CRA_c [Mu (975 aa) initn: 1417 init1: 1417 opt: 1417 Z-score: 1707.6 bits: 325.4 E(): 2.1e-86 Smith-Waterman score: 1417; 100.000% identity (100.000% similar) in 218 aa overlap (28-245:758-975) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::::::::::::::::::::::::::::: gi|148 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGG 730 740 750 760 770 780 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 790 800 810 820 830 840 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 850 860 870 880 890 900 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES 910 920 930 940 950 960 240 mKIAA4 QKWRHGED :::::::: gi|148 QKWRHGED 970 >>gi|205371779|sp|Q80XK6.3|ATG2B_MOUSE RecName: Full=Aut (2075 aa) initn: 1417 init1: 1417 opt: 1417 Z-score: 1702.9 bits: 325.6 E(): 3.8e-86 Smith-Waterman score: 1417; 100.000% identity (100.000% similar) in 218 aa overlap (28-245:1858-2075) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::::::::::::::::::::::::::::: gi|205 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGG 1830 1840 1850 1860 1870 1880 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 1890 1900 1910 1920 1930 1940 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 1950 1960 1970 1980 1990 2000 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES 2010 2020 2030 2040 2050 2060 240 mKIAA4 QKWRHGED :::::::: gi|205 QKWRHGED 2070 >>gi|59808210|gb|AAH89882.1| RGD1304878 protein [Rattus (820 aa) initn: 1410 init1: 1410 opt: 1410 Z-score: 1700.2 bits: 323.8 E(): 5.4e-86 Smith-Waterman score: 1410; 99.083% identity (100.000% similar) in 218 aa overlap (28-245:603-820) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG ::::::::::::.::::::::::::::::: gi|598 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAITEWLSDIKKNQLPGILGG 580 590 600 610 620 630 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 640 650 660 670 680 690 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 700 710 720 730 740 750 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|598 IYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDES 760 770 780 790 800 810 240 mKIAA4 QKWRHGED :::::::: gi|598 QKWRHGED 820 >>gi|118341317|gb|AAH62182.1| Atg2b protein [Mus musculu (2075 aa) initn: 1414 init1: 1414 opt: 1414 Z-score: 1699.2 bits: 325.0 E(): 6.1e-86 Smith-Waterman score: 1414; 99.541% identity (100.000% similar) in 218 aa overlap (28-245:1858-2075) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::::::::::::::::::::::::::::: gi|118 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGG 1830 1840 1850 1860 1870 1880 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|118 VGPMHSLVQLVQGLKDLVWLPIEQYRRDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 1890 1900 1910 1920 1930 1940 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 1950 1960 1970 1980 1990 2000 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES 2010 2020 2030 2040 2050 2060 240 mKIAA4 QKWRHGED :::::::: gi|118 QKWRHGED 2070 >>gi|149044218|gb|EDL97600.1| rCG27761, isoform CRA_b [R (1014 aa) initn: 1410 init1: 1410 opt: 1410 Z-score: 1698.9 bits: 323.8 E(): 6.4e-86 Smith-Waterman score: 1410; 99.083% identity (100.000% similar) in 218 aa overlap (28-245:797-1014) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG ::::::::::::.::::::::::::::::: gi|149 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGIDKLFSYAITEWLSDIKKNQLPGILGG 770 780 790 800 810 820 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 830 840 850 860 870 880 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 890 900 910 920 930 940 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 IYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDES 950 960 970 980 990 1000 240 mKIAA4 QKWRHGED :::::::: gi|149 QKWRHGED 1010 >>gi|62914010|gb|AAH15016.3| ATG2B protein [Homo sapiens (775 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1677.6 bits: 319.5 E(): 9.8e-85 Smith-Waterman score: 1391; 96.789% identity (100.000% similar) in 218 aa overlap (28-245:558-775) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::.::::::::.:::.::::::::::::: gi|629 DQGTLAGILIGLAQLNCSELKLKRLSYRHGLLGVDKLFSYAITEWLNDIKKNQLPGILGG 530 540 550 560 570 580 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 590 600 610 620 630 640 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT ::::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::: gi|629 IQAAAETAYDMVSPGTLSIEPKKTKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 650 660 670 680 690 700 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|629 IYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDES 710 720 730 740 750 760 240 mKIAA4 QKWRHGED ::::::.: gi|629 QKWRHGDD 770 >>gi|73964446|ref|XP_537549.2| PREDICTED: similar to Pro (1893 aa) initn: 1392 init1: 1392 opt: 1392 Z-score: 1673.2 bits: 320.0 E(): 1.7e-84 Smith-Waterman score: 1392; 96.789% identity (99.541% similar) in 218 aa overlap (28-245:1676-1893) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::.::::::::.:::.::::::::::::: gi|739 DQGTLAGILIGLAQLNCSELKLKRLFYRHGLLGVDKLFSYAITEWLTDIKKNQLPGILGG 1650 1660 1670 1680 1690 1700 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 1710 1720 1730 1740 1750 1760 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT ::::::::::::::.:::::::: :::::::::::::::::::::::::::::.:::::: gi|739 IQAAAETAYDMVSPGTLSIEPKKIKRFPHHRLAHQPVDLREGVAKAYSVVKEGLTDTAQT 1770 1780 1790 1800 1810 1820 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 IYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDES 1830 1840 1850 1860 1870 1880 240 mKIAA4 QKWRHGED :::::::: gi|739 QKWRHGED 1890 >>gi|109084826|ref|XP_001101467.1| PREDICTED: hypothetic (2053 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1671.5 bits: 319.8 E(): 2.1e-84 Smith-Waterman score: 1391; 96.789% identity (100.000% similar) in 218 aa overlap (28-245:1836-2053) 10 20 30 40 50 mKIAA4 YVVSKWESPDLQMYLYFFFALTVICSSLLGIDKLFSYAISEWLSDIKKNQLPGILGG :::.::::::::.:::.::::::::::::: gi|109 DQGTLAGILIGLAQLNCSELKLKRLSYRHGLLGVDKLFSYAITEWLNDIKKNQLPGILGG 1810 1820 1830 1840 1850 1860 60 70 80 90 100 110 mKIAA4 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQT 1870 1880 1890 1900 1910 1920 120 130 140 150 160 170 mKIAA4 IQAAAETAYDMVSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT ::::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::: gi|109 IQAAAETAYDMVSPGTLSIEPKKTKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQT 1930 1940 1950 1960 1970 1980 180 190 200 210 220 230 mKIAA4 IYETAAREHESRGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDES ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|109 IYETAAREHESRGVTGAVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDES 1990 2000 2010 2020 2030 2040 240 mKIAA4 QKWRHGED ::::::.: gi|109 QKWRHGDD 2050 245 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 08:44:57 2009 done: Tue Mar 17 08:50:06 2009 Total Scan time: 727.880 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]