FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4176.ptfa, 401 aa vs ./tmplib.26680 library 1768616 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.0905+/-0.00393; mu= 16.9449+/- 0.263 mean_var=72.5623+/-16.282, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1506 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1073 ( 424 res) meg01168 ( 424) 1158 261 1.2e-70 mKIAA0647 ( 1186 res) mbg01911 (1186) 881 201 3e-52 mKIAA3020 ( 1884 res) mbg15810 (1884) 468 112 4.1e-25 mKIAA1682 ( 801 res) mbh02812 ( 801) 392 95 2.2e-20 >>mKIAA1073 ( 424 res) meg01168 (424 aa) initn: 1070 init1: 1070 opt: 1158 Z-score: 1360.5 bits: 260.7 E(): 1.2e-70 Smith-Waterman score: 1158; 64.591% identity (65.098% ungapped) in 257 aa overlap (143-399:168-422) 120 130 140 150 160 170 mKIAA4 HVMRESLKKVKDIVYPNIEESHWLSSLESTHWLEHIKLVLTGAIQVADQVSSGKSSVLVH :. ..:.:.::...::.: :::.::.:: mKIAA1 ANIPDEELKRVASFRSRGRIPVSRLSRYIHHFKTCFQLILAGALRIADKVESGKTSVVVH 140 150 160 170 180 190 180 190 200 210 220 230 mKIAA4 CSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFGHKFASRIGHGDKNHADADR ::::::::::::::::::::..::::.:::.::.:::.::::.: :.:::::::::::: mKIAA1 CSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADR 200 210 220 230 240 250 240 250 260 270 280 290 mKIAA4 SPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFGTFLFNCDSARERQKLTER ::.:::::::::::..:::::::::: ::::.::::::: ::::: : .. : ...: .. mKIAA1 SPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKK 260 270 280 290 300 310 300 310 320 330 340 350 mKIAA4 TVSLWSLINSNKDKFKNPFYTKEINRVLYPVASMRHLELWVNYYIRWNPRVKQQQPNPVE :::::: :::. . : ::.: . :.:::::::::::::::.::::::::.: :.: .. mKIAA1 TVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKPQEP--IH 320 330 340 350 360 370 360 370 380 390 400 mKIAA4 QRYMELLALRDDYIKRLEELQLANSAKLADAPASTSSSSQMVPHVQTHF .:: :::: : . ...:::: : . ... .:: .: : ::: mKIAA1 SRYKELLAKRAELQRKVEELQREISNRSTSSSERASSPAQCVTPVQTVV 380 390 400 410 420 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 948 init1: 868 opt: 881 Z-score: 1030.4 bits: 201.1 E(): 3e-52 Smith-Waterman score: 881; 39.359% identity (40.541% ungapped) in 343 aa overlap (64-400:294-632) 40 50 60 70 80 90 mKIAA4 KMVIMRCSQPLVGMSGKRNKDDEKYLDVIRETNKQTSKLMIYDARPSVNAVANKATGGGY :.. .::.: ::: . ::::.: ::: mKIAA0 SGGSLSTGTNDASEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGGGC 270 280 290 300 310 320 100 110 120 130 140 150 mKIAA4 ESDDAYQNSELSFLDIHNIHVMRESLKKVKDIVYPNIEESHWLSSLESTHWLEHIKLVLT : .. : : :. :. . :::..:.:.. .. . . :.:::.::::.::.:....: mKIAA0 ECEEYYPNCEVLFMGMANIHAIRNSFQYLRAVCSQMPDPSNWLSALESTKWLQHLSVMLK 330 340 350 360 370 380 160 170 180 190 200 210 mKIAA4 GAIQVADQVSSGKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFG .:. ::. :. :::::::::::: :...:: ..:: .:::.:::..::...:..:: mKIAA0 AAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVESDWLDFG 390 400 410 420 430 440 220 230 240 250 260 270 mKIAA4 HKFASRIGHGDKNHADADRSPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRF :::..: :: .. . . .. :.:::..: : :. :::: :::::.::. ...: ::: . mKIAA0 HKFGDRCGHQENAEDQNEQCPVFLQWLDSVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLY 450 460 470 480 490 500 280 290 300 310 320 330 mKIAA4 GTFLFNCDSARERQKLTERTVSLWSLINSNKDKFKNPFYTKEINRVLYPVASMRHLELWV :::: : ::.... .:: :.:.:. ... .:.: .:: . ::.:: .: :.::. mKIAA0 GTFLANNPCEREKRNIYKRTCSVWALLRAGNKNFHNFLYTPGSDVVLHPVCHVRALHLWT 510 520 530 540 550 560 340 350 360 370 380 mKIAA4 NYYIRWNPRVKQQQPN------PVEQRYMELLALRDDYIKRLEELQLANSAKLADAPAST :. . . : :: : .:. . : . . . .. :: ...: . mKIAA0 AVYLPASSPCTLGEENMDLYLSPVAQS-QEFSGRSLDRLPKTRSMDDLLSACDTSSPLTR 570 580 590 600 610 620 390 400 mKIAA4 SSSSQMVPHVQTHF .::. :....: mKIAA0 TSSD---PNLNNHSQEVRGSLEPWHSSPEGAETVIDSGVGSPQLTVGEMGLPPPLPSSQK 630 640 650 660 670 >>mKIAA3020 ( 1884 res) mbg15810 (1884 aa) initn: 376 init1: 241 opt: 468 Z-score: 543.3 bits: 111.6 E(): 4.1e-25 Smith-Waterman score: 503; 34.768% identity (38.603% ungapped) in 302 aa overlap (78-353:1340-1637) 50 60 70 80 90 100 mKIAA4 SGKRNKDDEKYLDVIRETNKQTSKLMIYDARPSVNAVANKATGGGYESDDAYQNSELSFL : .. ...:: : . : :. :: . mKIAA3 DVGSRLAGRDLLSTPHTNGAPPDSGFLRPQRAALYIIGDKAQLKGVRPDP-LQQWELVPI 1310 1320 1330 1340 1350 1360 110 120 130 140 150 160 mKIAA4 DIHNIHVMRESLKKV-KDIVY--PNIEES--HWLSSLESTHWLEHIKLVLTGAIQVADQV .. . . .. :.::. : : : : : .: :::...:: .:. .: .. :.. . mKIAA3 EVFEARQVKASFKKLLKACVPGCPATEPSPASFLRSLEDSEWLIQIHKLLQISVLVVELL 1370 1380 1390 1400 1410 1420 170 180 190 200 210 220 mKIAA4 SSGKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFGHKFASRIGH .:: ::::: :::: :.:..::..:. : ::::.:::..::.:::.::::.:. : .: mKIAA3 DSG-SSVLVSLEDGWDITTQVVSLVQLLSDPFYRTLEGFRLLVEKEWLSFGHRFSHRGAH 1430 1440 1450 1460 1470 1480 230 240 250 260 270 280 mKIAA4 GDKNHADADRSPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFGTFLFNCDS ..... .:.::::.::: :. ::: :::.. .: . : : :: :::.. : mKIAA3 TLAGQSSG-FTPVFLQFLDCVHQVHLQFPMEFEFSQFYLKFLGYHHTSRRFRTFLLDSDY 1490 1500 1510 1520 1530 1540 290 300 310 320 mKIAA4 ARERQKLT-----ERT-----VSLWSLINSNKDK---FKNPFYTKEINRVLYPVASMRHL : . : :: :.: .. . . : : :. : ..:: : ... .: mKIAA3 ERIELGLLYEEKGERRGQLACKSVWEYVDRLSKRTPMFYNYTYAPEDTEVLRPYSNVSNL 1550 1560 1570 1580 1590 1600 330 340 350 360 370 380 mKIAA4 ELWVNYYIR--------WNPRVKQQQPNPVEQRYMELLALRDDYIKRLEELQLANSAKLA ..: ..: . .. .. : :.: :.. mKIAA3 KVW-DFYTEETLAEGPPYDWELAQGPPEPPEEERPDGGAPQSRRRVVWPCYDSRPRVQPD 1610 1620 1630 1640 1650 1660 390 400 mKIAA4 DAPASTSSSSQMVPHVQTHF mKIAA3 AISRLLEELQRLETELGRPSERWKDTWDRVKAAQRLESRQDGRGTPSSLLVSAVPHHRRS 1670 1680 1690 1700 1710 1720 >>mKIAA1682 ( 801 res) mbh02812 (801 aa) initn: 414 init1: 210 opt: 392 Z-score: 458.2 bits: 94.7 E(): 2.2e-20 Smith-Waterman score: 403; 36.082% identity (39.106% ungapped) in 194 aa overlap (135-315:407-598) 110 120 130 140 150 160 mKIAA4 SFLDIHNIHVMRESLKKVKDIVYPNIEESHWLSSLESTHWLEHIKLVLTGAIQVADQVSS :.: :::. ::. :. : ::.... . . mKIAA1 SLQEIQSAYCKFKQLFLIDNSSEFWDTDIKWFSLLESSSWLDIIRRCLKKAIEITECLEA 380 390 400 410 420 430 170 180 190 200 210 220 mKIAA4 GKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFGHKFASRIGHGD . .::. .. : :.::...:.:. :: ::. :.::::. ::.: .: .: mKIAA1 QNVNVLLLEENASDLCCLLSSLVQVMMDAHCRTRTGFQSLIQKEWVMGGHSFLDRCNH-- 440 450 460 470 480 490 230 240 250 260 270 280 mKIAA4 KNHADADRSPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFGTFLFNC---- ...: .. :::: :.:::::. .:.: ::::.: .: .. : :: :.::.:: mKIAA1 LHQSDKEEVPIFLLFLDCVWQLVHQYPPAFEFTETYLTVLSDSLYIPIFSTFFFNSPHQK 500 510 520 530 540 550 290 300 310 320 330 mKIAA4 DSARERQKLTERTVSL-------WSLINSNKDK--FKNPFYTKEINRVLYPVASMRHLEL :. :..: .. : ::. : . ..::.:... mKIAA1 DTNMGRENLDAQSKPLTLLTVWDWSVQFEPKAQTLLRNPLYVEKPKLDRGQQKGSRFKHQ 560 570 580 590 600 610 340 350 360 370 380 390 mKIAA4 WVNYYIRWNPRVKQQQPNPVEQRYMELLALRDDYIKRLEELQLANSAKLADAPASTSSSS mKIAA1 RQLSLPLTQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDDLQDSSREFYDSWHSKP 620 630 640 650 660 670 401 residues in 1 query sequences 1768616 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:04:09 2006 done: Mon Mar 27 11:04:10 2006 Scan time: 0.610 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]