FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0799.ptfa, 1450 aa vs ./tmplib.26680 library 1767567 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.4809+/-0.00832; mu= 2.2602+/- 0.551 mean_var=422.5805+/-102.149, 0's: 0 Z-trim: 9 B-trim: 25 in 1/35 Lambda= 0.0624 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA2028 ( 1392 res) mib04094 (1392) 274 41 0.0024 >>mKIAA2028 ( 1392 res) mib04094 (1392 aa) initn: 420 init1: 134 opt: 274 Z-score: 152.3 bits: 40.7 E(): 0.0024 Smith-Waterman score: 477; 21.402% identity (25.876% ungapped) in 1070 aa overlap (420-1436:413-1350) 390 400 410 420 430 440 mKIAA0 EADDDAFKDSPNPSEHGHSDQRTSGIRTSDDSSEEDPYMNYTVVPTSPSADSTVLLAASM :.. .: ..: : ::. : mKIAA2 NAISMIRPLRPQETDLDVVDGDGAEAVNRMDTGCDDGLFSYDSQDPPPCADDQENSEAPK 390 400 410 420 430 440 450 460 470 480 490 500 mKIAA0 Q------DSASLHNSSSGESTYCMPQNNGDLPSPDGDYDYDQDDYEDGAITSGSSVTFSN . . :: : :: ..: : .... . . : :..:. : mKIAA2 KAPCNKPPTPPLHRFPSWESRIYAVAKSGIRVSEAFNMEHANKNSADILSYSAASLYTSL 450 460 470 480 490 500 510 520 530 540 550 560 mKIAA0 SYGSQWSPDYRYSVGTYNSSGAYRFSSEGAQSSFEDSEEDFDSRFDTDDELSYRRDSVYS : .. .: : : .. .. : .... :. ::: .. .::.. .: : : mKIAA2 IYKNMTTPVYTTLKGKATQISSSPFLDDSSGSDEEDSSRS-SSRLSESDARSRSGPS--- 510 520 530 540 550 570 580 590 600 610 mKIAA0 CVTLPYFHSFLYMKGGLMNSW---KRRWCVLKDETFLWFRSKQ--EALKQGWLHKKGGGS : :: :. .: . . . : . . .: . : . : . .:. mKIAA2 --------SPRAMKRGVSDSSAASESDYAIPPDAYPIDAECSQPEQKLLKTCLASCDNGK 560 570 580 590 600 610 620 630 640 650 660 670 mKIAA0 STLSRR--NWKKRWFVLRQSKLMYFENDSE--EKLKGTVEVRTAKEIIDNTSKENGIDII . .: : .::.:::::. ..:.:... :. .: .: .:. .. :. . .:.. ... mKIAA2 NEMSVRVKTWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQT-VQLA 620 630 640 650 660 680 690 700 710 720 730 mKIAA0 LADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDEQANPQNAVGTLDVGLIDSVC .:..: :.::. .:..::..: .. . ::: .: mKIAA2 TEKHTYYLTADSPNILEEWIKVLQSV----------LRVQAANP--------------LC 670 680 690 700 740 750 760 770 780 790 mKIAA0 ASDSPD-RPNSFVIITANRVLHCNADTPEEMHHWITLLQRSKGDTRVEGQEFIVRGWLHK . :. .: ..: .: : . : :. . : . ..: mKIAA2 LQ--PEGKPAVKGLLT--KVKHGYSKRV-----WCMLVGKVLYYFRNQEDKF-------- 710 720 730 740 800 810 820 830 840 850 mKIAA0 EVKNSPKMSSLKLKKRWFVLTHNSLDYYKSSEKNALKLGTLVLNSLCSV-VPPDEKIFKE : ...::: : . ... .: .:... : .:.. .. : : :. mKIAA2 -----P-LGQLKL---WEAKVEE-VDRSCDSDEDYETRGCYLLSTHYTIIVHP-----KD 750 760 770 780 790 860 870 880 890 900 910 mKIAA0 TGYWNVTVYGRKHCYRLYTKLLNEATRWSSAIQNVTDTKAPIDTPTQQLIQDIKENCLNS : . . : :: . . :. : : ... . . .::. . . ... mKIAA2 QGPTYLLI-GSKHEKEAWLYHLTVA---------VGSNNINVGSEFEQLVCKLLN--IEG 800 810 820 830 840 920 930 940 950 960 970 mKIAA0 DVVEQIYKRNPILRYTHHPLHSPLLPLPYGDINLNLLKDKGYTTLQDEAIKIFNSLQQL- . ::. :.:.: .... . ::: :: .:: ::::.:.. : . mKIAA2 EPSSQIW-RHPMLCHSKEGILSPLTTLPS-------------EALQTEAIKLFKTCQLFI 850 860 870 880 980 990 1000 1010 1020 mKIAA0 -ESMSDP-----IPIIQGILQTGHDLRPLRDELYCQLIKQTNKVPHPGSVGNLYSWQILT ....: : . :. ::. :..:. ::::::: . .. : : .::.:. mKIAA2 NAAVDSPAIDYHISLAQSALQVCLTHPELQNEICCQLIKQTRRRQLQNQPGPLQGWQLLA 890 900 910 920 930 940 1030 1040 1050 1060 1070 1080 mKIAA0 CLSCTFLPSRGILKYLKFHLKRIREQFPGTEMEKYALFIYESLKKTKC---REFVPSRDE ::: . .: :..::.: .. ::. :::.. . ...:. :: ::: : mKIAA2 LCVGLFLPHHPFLWLLQLHLQRNADSR--TEFGKYAIYCQRCVERTQQNGDREARPSRME 950 960 970 980 990 1000 1090 1100 1110 1120 1130 mKIAA0 IEALI------HRQEMTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAM-EDSRNMFA : . . : . .. :. .: . ... ::. : .. : . .: . ... :: mKIAA2 ILSTLLRNPYHHSRPFSIPVHFMNGLYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFA 1010 1020 1030 1040 1050 1060 1140 1150 1160 1170 1180 mKIAA0 LF--EYNGQ-VDKAIESRTIVADVLAKFEKLAATSEAGDAPW----KFYFKLYCFLDTDS :: . .:. ... ... . :...:.:. . .. : .. .: ...... mKIAA2 LFTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKCEGSRTVRLTYKNRLYFSVQA 1070 1080 1090 1100 1110 1120 1190 1200 1210 1220 1230 1240 mKIAA0 MPKDSVEFAFMFEQAHEAVIHGHHPAPEESLQVLAALRLQYLQGDYT-PHTSIPPLEEVY . . : .... :... .:.: : .. .::: : ::. : .. : : mKIAA2 RGETDREKTLLLYQTNDQIINGLFPLNKDLALEMAALLAQVDIGDFERPFST--PAGPVT 1130 1140 1150 1160 1170 1180 1250 1260 1270 1280 1290 1300 mKIAA0 SVQRLRARISQSTKTFTPYERLEKRRTSFLEGTLRRSFRTGSVVRQKAEEEQMLDMWIKE . . ..: . : : :: .: : :::. ... mKIAA2 NQCKANQTLKQVIERFYP-----KR------------YREGC------SEEQLRQLY--- 1190 1200 1210 1310 1320 1330 1340 1350 1360 mKIAA0 EVCSARTSIIDKWKKLQGMNQEQAMAKYMALIKEWPGYGSTLF---DVECKEGGFPQELW : : :: :.: . . . :... ..:: .:. :: . . : . .: mKIAA2 ----QRLST--KWMALRGHSAADCIRIYLTVARKWPFFGAKLFFAKPIAPSSLG-NNCVW 1220 1230 1240 1250 1260 1270 1370 1380 1390 1400 1410 mKIAA0 LGVSADAVSVYKRGEGKPLEVFQYEHILSFGAPLANTYKIVVDE------RELLFETSE- :.: ...:. . . . ..:. ...::. . . .: . ..::: .. mKIAA2 LAVHENGLSILEYTSMRLVTSYMYKGLMTFGGYQEDFMVVVSTQSKDRPTEKLLFAMAKH 1280 1290 1300 1310 1320 1330 1420 1430 1440 1450 mKIAA0 -VVDVAKLMKAYISMIVKKRYSTTRSVSSQGSSR ..... :. .::. . ... mKIAA2 KILEITLLIASYINSFHQQKTTFHHLSAPALLSPRTQAPQARVMGSQPPLSNSRPTKGPT 1340 1350 1360 1370 1380 1390 1450 residues in 1 query sequences 1767567 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:53 2006 done: Mon Mar 27 10:28:54 2006 Scan time: 1.230 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]