# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg02982.fasta.nr -Q ../query/mKIAA1019.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1019, 480 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7894089 sequences Expectation_n fit: rho(ln(x))= 5.9822+/-0.000203; mu= 7.5673+/- 0.011 mean_var=133.9389+/-25.101, 0's: 29 Z-trim: 133 B-trim: 113 in 1/64 Lambda= 0.110821 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|189908181|gb|ACE60213.1| SON protein (predicted (1825) 2991 490.4 1.7e-135 gi|148671870|gb|EDL03817.1| Son cell proliferation (2451) 2990 490.4 2.3e-135 gi|114683938|ref|XP_001165799.1| PREDICTED: SON DN (2309) 2983 489.2 4.7e-135 gi|109492830|ref|XP_221656.4| PREDICTED: similar t (2417) 2975 488.0 1.2e-134 gi|30488|emb|CAA44793.1| DBP-5 protein [Homo sapie (1179) 2967 486.3 1.8e-134 gi|17046373|gb|AAL34497.1|AF380179_1 SON DNA bindi (2140) 2967 486.6 2.6e-134 gi|114683936|ref|XP_001165875.1| PREDICTED: simila (2140) 2967 486.6 2.6e-134 gi|109065559|ref|XP_001093086.1| PREDICTED: simila (2187) 2967 486.6 2.7e-134 gi|114683948|ref|XP_001165838.1| PREDICTED: SON DN (2233) 2967 486.6 2.7e-134 gi|119630219|gb|EAX09814.1| SON DNA binding protei (2325) 2967 486.7 2.8e-134 gi|17046377|gb|AAL34499.1|AF380181_1 SON DNA bindi (2325) 2967 486.7 2.8e-134 gi|114683934|ref|XP_001165903.1| PREDICTED: simila (2388) 2967 486.7 2.8e-134 gi|114683932|ref|XP_001165975.1| PREDICTED: SON DN (2426) 2967 486.7 2.9e-134 gi|21040326|ref|NP_620305.1| SON DNA-binding prote (2426) 2967 486.7 2.9e-134 gi|159487307|gb|ABW97197.1| SON DNA binding protei (2426) 2967 486.7 2.9e-134 gi|119630221|gb|EAX09816.1| SON DNA binding protei (2426) 2967 486.7 2.9e-134 gi|20141631|sp|P18583.3|SON_HUMAN RecName: Full=SO (2426) 2967 486.7 2.9e-134 gi|119630224|gb|EAX09819.1| SON DNA binding protei (2432) 2967 486.7 2.9e-134 gi|114683930|ref|XP_531438.2| PREDICTED: SON DNA-b (2459) 2967 486.7 2.9e-134 gi|119630227|gb|EAX09822.1| SON DNA binding protei (2459) 2967 486.7 2.9e-134 gi|119630222|gb|EAX09817.1| SON DNA binding protei (2482) 2967 486.7 2.9e-134 gi|167427274|gb|ABZ80253.1| SON DNA-binding protei (2454) 2964 486.2 4e-134 gi|169246083|gb|ACA51060.1| SON DNA-binding protei (2422) 2960 485.6 6.2e-134 gi|204305650|gb|ACG63674.2| SON DNA-binding protei (2411) 2958 485.2 7.8e-134 gi|218456207|gb|ACK77499.1| SON DNA-binding protei (2402) 2947 483.5 2.6e-133 gi|36546|emb|CAA45282.1| son-a [Homo sapiens] (1523) 2944 482.8 2.7e-133 gi|74001149|ref|XP_857186.1| PREDICTED: similar to (1320) 2942 482.4 3.1e-133 gi|74001151|ref|XP_857233.1| PREDICTED: similar to (1425) 2942 482.4 3.2e-133 gi|74001153|ref|XP_857275.1| PREDICTED: similar to (1442) 2942 482.4 3.2e-133 gi|14571500|gb|AAK07692.1| NREBP [Homo sapiens] (2386) 2944 483.0 3.6e-133 gi|74001159|ref|XP_857396.1| PREDICTED: similar to (2145) 2942 482.6 4.2e-133 gi|74001155|ref|XP_857313.1| PREDICTED: similar to (2314) 2942 482.7 4.4e-133 gi|74001157|ref|XP_857352.1| PREDICTED: similar to (2330) 2942 482.7 4.5e-133 gi|74001161|ref|XP_857437.1| PREDICTED: similar to (2393) 2942 482.7 4.5e-133 gi|74001163|ref|XP_857478.1| PREDICTED: similar to (2415) 2942 482.7 4.6e-133 gi|74001129|ref|XP_856774.1| PREDICTED: similar to (2431) 2942 482.7 4.6e-133 gi|74001165|ref|XP_535583.2| PREDICTED: similar to (2464) 2942 482.7 4.6e-133 gi|61966462|emb|CAG47115.1| SON DNA-binding protei (2136) 2940 482.3 5.3e-133 gi|124358955|ref|NP_849211.3| Son cell proliferati (2444) 2920 479.2 5.3e-132 gi|177773079|gb|ACB73274.1| SON DNA-binding protei (2432) 2916 478.5 8.2e-132 gi|194226216|ref|XP_001915595.1| PREDICTED: simila (2426) 2913 478.1 1.1e-131 gi|20139953|sp|Q9QX47.1|SON_MOUSE RecName: Full=SO (2404) 2909 477.4 1.8e-131 gi|114683942|ref|XP_001165709.1| PREDICTED: SON DN (2243) 2481 408.9 6.7e-111 gi|119630225|gb|EAX09820.1| SON DNA binding protei (2303) 2481 409.0 6.8e-111 gi|114683940|ref|XP_001165738.1| PREDICTED: SON DN (2303) 2481 409.0 6.8e-111 gi|17046375|gb|AAL34498.1|AF380180_1 SON DNA bindi (2303) 2481 409.0 6.8e-111 gi|21040314|ref|NP_115571.1| SON DNA-binding prote (2303) 2481 409.0 6.8e-111 gi|74001127|ref|XP_856728.1| PREDICTED: similar to (2250) 2456 404.9 1.1e-109 gi|74001141|ref|XP_848772.1| PREDICTED: similar to (2292) 2456 405.0 1.1e-109 gi|126325255|ref|XP_001365912.1| PREDICTED: simila (2421) 2384 393.5 3.3e-106 >>gi|189908181|gb|ACE60213.1| SON protein (predicted) [S (1825 aa) initn: 2991 init1: 2991 opt: 2991 Z-score: 2589.1 bits: 490.4 E(): 1.7e-135 Smith-Waterman score: 2991; 96.835% identity (99.156% similar) in 474 aa overlap (1-474:1225-1698) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|189 KKKNREKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1200 1210 1220 1230 1240 1250 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|189 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKSVRARSRT 1260 1270 1280 1290 1300 1310 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|189 PSRRSRSHTPSRRRRSRSVGRRRSFSVSPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1320 1330 1340 1350 1360 1370 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|189 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1380 1390 1400 1410 1420 1430 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 1440 1450 1460 1470 1480 1490 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|189 LTEKCKQIAQSKEDDDVIVNKPHVSDEEDEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 1500 1510 1520 1530 1540 1550 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|189 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1560 1570 1580 1590 1600 1610 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 1620 1630 1640 1650 1660 1670 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::::... ::. :: gi|189 ANTGAQAWIKKVHSICIYKTDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPI 1680 1690 1700 1710 1720 1730 >>gi|148671870|gb|EDL03817.1| Son cell proliferation pro (2451 aa) initn: 3369 init1: 2990 opt: 2990 Z-score: 2586.7 bits: 490.4 E(): 2.3e-135 Smith-Waterman score: 2990; 99.784% identity (99.784% similar) in 463 aa overlap (1-463:1860-2322) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|148 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1830 1840 1850 1860 1870 1880 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT 1890 1900 1910 1920 1930 1940 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1950 1960 1970 1980 1990 2000 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 2010 2020 2030 2040 2050 2060 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 2070 2080 2090 2100 2110 2120 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 2130 2140 2150 2160 2170 2180 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS 2190 2200 2210 2220 2230 2240 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 2250 2260 2270 2280 2290 2300 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|148 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 2310 2320 2330 2340 2350 2360 >>gi|114683938|ref|XP_001165799.1| PREDICTED: SON DNA-bi (2309 aa) initn: 3361 init1: 2983 opt: 2983 Z-score: 2580.9 bits: 489.2 E(): 4.7e-135 Smith-Waterman score: 2983; 97.447% identity (99.574% similar) in 470 aa overlap (1-470:1835-2304) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|114 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1810 1820 1830 1840 1850 1860 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|114 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1870 1880 1890 1900 1910 1920 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1930 1940 1950 1960 1970 1980 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|114 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1990 2000 2010 2020 2030 2040 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 2050 2060 2070 2080 2090 2100 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 2110 2120 2130 2140 2150 2160 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|114 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 2170 2180 2190 2200 2210 2220 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 2230 2240 2250 2260 2270 2280 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::::... :.. gi|114 ANTGAQAWIKKVHSICTYESVEQKV 2290 2300 >>gi|109492830|ref|XP_221656.4| PREDICTED: similar to SO (2417 aa) initn: 3353 init1: 2975 opt: 2975 Z-score: 2573.8 bits: 488.0 E(): 1.2e-134 Smith-Waterman score: 2975; 99.136% identity (99.784% similar) in 463 aa overlap (1-463:1826-2288) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|109 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1800 1810 1820 1830 1840 1850 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|109 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1860 1870 1880 1890 1900 1910 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1920 1930 1940 1950 1960 1970 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1980 1990 2000 2010 2020 2030 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 2040 2050 2060 2070 2080 2090 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 2100 2110 2120 2130 2140 2150 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS 2160 2170 2180 2190 2200 2210 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 2220 2230 2240 2250 2260 2270 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|109 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 2280 2290 2300 2310 2320 2330 >>gi|30488|emb|CAA44793.1| DBP-5 protein [Homo sapiens] (1179 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2570.6 bits: 486.3 E(): 1.8e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:691-1153) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|304 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 670 680 690 700 710 720 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|304 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 730 740 750 760 770 780 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 790 800 810 820 830 840 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|304 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 850 860 870 880 890 900 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 910 920 930 940 950 960 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 970 980 990 1000 1010 1020 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|304 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1030 1040 1050 1060 1070 1080 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 1090 1100 1110 1120 1130 1140 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|304 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKWAGEKEKD 1150 1160 1170 >>gi|17046373|gb|AAL34497.1|AF380179_1 SON DNA binding p (2140 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2567.5 bits: 486.6 E(): 2.6e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:1516-1978) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|170 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1490 1500 1510 1520 1530 1540 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|170 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1550 1560 1570 1580 1590 1600 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1610 1620 1630 1640 1650 1660 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|170 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1670 1680 1690 1700 1710 1720 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 1730 1740 1750 1760 1770 1780 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 1790 1800 1810 1820 1830 1840 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|170 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1850 1860 1870 1880 1890 1900 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 1910 1920 1930 1940 1950 1960 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|170 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 1970 1980 1990 2000 2010 2020 >>gi|114683936|ref|XP_001165875.1| PREDICTED: similar to (2140 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2567.5 bits: 486.6 E(): 2.6e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:1516-1978) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|114 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1490 1500 1510 1520 1530 1540 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|114 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1550 1560 1570 1580 1590 1600 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1610 1620 1630 1640 1650 1660 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|114 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1670 1680 1690 1700 1710 1720 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 1730 1740 1750 1760 1770 1780 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 1790 1800 1810 1820 1830 1840 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|114 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1850 1860 1870 1880 1890 1900 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 1910 1920 1930 1940 1950 1960 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|114 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 1970 1980 1990 2000 2010 2020 >>gi|109065559|ref|XP_001093086.1| PREDICTED: similar to (2187 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2567.4 bits: 486.6 E(): 2.7e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:1563-2025) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|109 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1540 1550 1560 1570 1580 1590 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|109 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1600 1610 1620 1630 1640 1650 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1660 1670 1680 1690 1700 1710 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1720 1730 1740 1750 1760 1770 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 1780 1790 1800 1810 1820 1830 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 1840 1850 1860 1870 1880 1890 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|109 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1900 1910 1920 1930 1940 1950 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 1960 1970 1980 1990 2000 2010 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|109 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 2020 2030 2040 2050 2060 2070 >>gi|114683948|ref|XP_001165838.1| PREDICTED: SON DNA-bi (2233 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2567.3 bits: 486.6 E(): 2.7e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:1642-2104) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|114 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1620 1630 1640 1650 1660 1670 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|114 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1680 1690 1700 1710 1720 1730 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1740 1750 1760 1770 1780 1790 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|114 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1800 1810 1820 1830 1840 1850 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 1860 1870 1880 1890 1900 1910 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 1920 1930 1940 1950 1960 1970 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|114 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 1980 1990 2000 2010 2020 2030 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 2040 2050 2060 2070 2080 2090 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|114 ANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRK 2100 2110 2120 2130 2140 2150 >>gi|119630219|gb|EAX09814.1| SON DNA binding protein, i (2325 aa) initn: 3345 init1: 2967 opt: 2967 Z-score: 2567.1 bits: 486.7 E(): 2.8e-134 Smith-Waterman score: 2967; 98.704% identity (99.784% similar) in 463 aa overlap (1-463:1835-2297) 10 20 30 mKIAA1 KSRKRTSESRSRARKRSSKSKSHRSQTRSR :::::::::::::::::::::::::::::: gi|119 KNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSR 1810 1820 1830 1840 1850 1860 40 50 60 70 80 90 mKIAA1 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRT ::::::::::::::::::::::::::::::::::::::::::::::::::::..:::::: gi|119 SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT 1870 1880 1890 1900 1910 1920 100 110 120 130 140 150 mKIAA1 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1930 1940 1950 1960 1970 1980 160 170 180 190 200 210 mKIAA1 SRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|119 SRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERG 1990 2000 2010 2020 2030 2040 220 230 240 250 260 270 mKIAA1 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEE 2050 2060 2070 2080 2090 2100 280 290 300 310 320 330 mKIAA1 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTEKCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTP 2110 2120 2130 2140 2150 2160 340 350 360 370 380 390 mKIAA1 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEESKDDDNVFSSSLPSEPVDIS ::::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::: gi|119 PKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDIS 2170 2180 2190 2200 2210 2220 400 410 420 430 440 450 mKIAA1 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQL 2230 2240 2250 2260 2270 2280 460 470 480 mKIAA1 ANTGAQAWIKKVQTVNKYKAKLFLCWFCFL ::::::::::: : gi|119 ANTGAQAWIKKGQILVAVFLPRSVPAVLFTTLLLPRPRISS 2290 2300 2310 2320 480 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 14:25:13 2009 done: Tue Mar 17 14:32:09 2009 Total Scan time: 936.290 Total Display time: 0.280 Function used was FASTA [version 34.26.5 April 26, 2007]