FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0858.ptfa, 1625 aa vs ./tmplib.26680 library 1767392 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.6887+/-0.00713; mu= 18.6737+/- 0.480 mean_var=364.9582+/-84.605, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.0671 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1102 ( 785 res) mbh02389 ( 785) 338 48 1.2e-05 >>mKIAA1102 ( 785 res) mbh02389 (785 aa) initn: 594 init1: 311 opt: 338 Z-score: 193.8 bits: 47.7 E(): 1.2e-05 Smith-Waterman score: 499; 26.339% identity (34.601% ungapped) in 691 aa overlap (589-1257:53-600) 560 570 580 590 600 610 mKIAA0 WEAIWEASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAED---VQNLRQVRYEEMQKIK : :: :. :. : ..: :..: :. mKIAA1 RKSWSTATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLIN 30 40 50 60 70 80 620 630 640 650 660 670 mKIAA0 SQLKEQDQKWQDDLAKWKNRRKSYTSDLQKKKEEREEIEK-----QALEKSDRSSKTFRE .::.:.:.:::::::.::.::.: ..:: ::.:::...:: .. . .: ::.:: mKIAA1 NQLREEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYRE 90 100 110 120 130 140 680 690 700 710 720 mKIAA0 MLQDRESRGSTV-TSWRRTYSSDDILDDGVLPPTV---TLSETSYQSERLEDEARAHPAE ..:..: : . ... . :... .:.: . :.::. :::: mKIAA1 IVQEKERRERELHEAYKNARSQEEA--EGILQQYIERFTISEAVL--ERLE--------- 150 160 170 180 730 740 750 760 770 780 mKIAA0 MPKEDSTTFANREDSVVAETQLASHSPEEQRLAPSPSEEPRQASGSSAEPHQAPLLSTEP ::: . : ::: : :. : : . : :. . mKIAA1 MPK-------------ILER---SHSTE-----PNVSSFPNDPS---------PMKYLRQ 190 200 210 790 800 810 820 830 840 mKIAA0 RRTPLPSEEPHQASLSSTLQRPSSLSSQQSWSTRAESTRISASLPRSYQRTDTARLTSVV . : :. :.. .:. : : : : .: . : :. : . . .. mKIAA1 QSLPPPK---FTATVETTIARTSVPESIASAGTGSPSKIIT---PNT---------VPML 220 230 240 250 260 850 860 870 880 890 900 mKIAA0 TARPFGTSSRGISSLPRSYTMDDGWKYNGDV----EVVKREQLDLGRATGPKPDSSHFIS : ::. .. .. . . ... .: ..::.. : :... . : ::. .:... mKIAA1 TPRPY-SQPKNSQEVLKTFKVDGKVSMNGEMAPGDEEGKEKEGPAAAAPGPSLTKSQMFE 270 280 290 300 310 320 910 920 930 940 950 960 mKIAA0 GSASEKEVIATEDVASLSSPTLPSSSLSHDRAVSSKATFSSMSGLDSVSDSGEGRGSPLR : :. .. ::. ... :.. .. : :. . : ..:. :. :. mKIAA1 GVATVHD-----------SPVQVKQG-SNSIEINIKKPNSAPQELTAASEETESNGQE-- 330 340 350 360 970 980 990 1000 1010 1020 mKIAA0 EVSRSLDQFSDMRVSINQTPGNKPVFGFTIKWDISGIFVASVEQGSPAEFSQLQVDDEIL :. .. : ::. . . . :...: . ::. mKIAA1 ------DEDGEER------PGTGDLEPDSAE---PQHFTTTVTRCSPT------------ 370 380 390 400 1030 1040 1050 1060 1070 1080 mKIAA0 AINNTKFSYKDTKKWEEVMANAQETGNLVMDVRRYGKSGSSETKWIDTTSGIYNSDKSSS . ..:: .: : : .: . :.. : : :: mKIAA1 -VALVEFS-----------SNPQ----LKNEVPEQGQK-----KPEDEMSG--------- 410 420 430 1090 1100 1110 1120 1130 1140 mKIAA0 LSVTTDFSESLQSPYTESKEVNGIHEESNPFDSKASESISLKNLKRRSQFFEQGSSDSVA .: .:... .: . :.. . :: .: :. .:. . . ::.. . mKIAA1 -KVELVLSQKVAKPKSPEPEAT----LTFPFLDKMPETNQLH--------LPNPSSQADS 440 450 460 470 1150 1160 1170 1180 1190 1200 mKIAA0 PDLPVPTLSAPSR-WAWDQEEERRRQERWQKEQDRLLQEKYQREQEKLREEWQRAQQEAE :. :.: . :::: ::::::::.::.::.:::::.::.::.::.:::..::.:.: mKIAA1 PSSEKSPGSTPFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVE 480 490 500 510 520 530 1210 1220 1230 1240 1250 mKIAA0 RENSKYLDEELMVLNSN----SISLTSREPVAATWEATWSEGSKS-LDSEGTRAGEEDRG .:. .: .:: ..... .:: .: . .... .: . :... .: :. :..: mKIAA1 EEERRYYEEERKIIEDTVVPFTISSSSADQLSTSLSVTEGSGTRNKMDLENCPDKENERR 540 550 560 570 580 590 1260 1270 1280 1290 1300 1310 mKIAA0 QLEDDAVYEDQSQKLQELEQEKKRKEQEAQEEERRKQREAQAWAEAEAKAWAEAQARAEA : mKIAA1 QKTPFQENDGDSLLKTREGGLPEEQSLTPSPSANPEISVSKGIHQDPQLEAEAGAPHCGT 600 610 620 630 640 650 1625 residues in 1 query sequences 1767392 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:30:26 2006 done: Mon Mar 27 10:30:27 2006 Scan time: 1.290 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]