FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0521.ptfa, 740 aa vs ./tmplib.26680 library 1768277 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.3021+/-0.00819; mu= -2.8779+/- 0.546 mean_var=373.0651+/-85.584, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.0664 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1998 ( 1366 res) mbg16805 (1366) 1058 116 2.7e-26 mKIAA0651 ( 985 res) mbg06227 ( 985) 826 94 1.1e-19 mKIAA0380 ( 653 res) mfj03079 ( 653) 237 37 0.0081 >>mKIAA1998 ( 1366 res) mbg16805 (1366 aa) initn: 540 init1: 540 opt: 1058 Z-score: 564.5 bits: 116.0 E(): 2.7e-26 Smith-Waterman score: 1058; 53.529% identity (54.491% ungapped) in 340 aa overlap (2-339:1030-1365) 10 20 30 mKIAA0 LGVQECILLVTQRITKYPVLVERIIQNTEAG :. ::::::::::::::::::::.: :. mKIAA1 AMSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKER 1000 1010 1020 1030 1040 1050 40 50 60 70 80 90 mKIAA0 TEDYKDLSQALSLIKDIISQVDAKVSEYEKDQRLKEIAAKTDQKSSGKLKNGLTFRKEDM ::...:: .::.::::.:. :: :::::::.:. :: : ..:. ::::: .:::. . mKIAA1 TEEHRDLCKALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQAL 1060 1070 1080 1090 1100 1110 100 110 120 130 140 150 mKIAA0 L-QQRQLHLEGALCWKSTSGRLKDVLAVLLTDVLLLLQEKDQKYVFASVDSKPPVISLQK : :.: : .: . ::...::.::.::.:::::::.::::::::.::.::.:: :::::: mKIAA1 LSQERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQK 1120 1130 1140 1150 1160 1170 160 170 180 190 200 210 mKIAA0 LIVREVANEEKAMFLISASMQGPEMYEMYTSSKEDRNIWMAHIRRAVESCPDEEEDVFSE ::.:::::::..::::::: ::::::..:.:::.:: :: .:..::::::.:: :: mKIAA1 LIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSE 1180 1190 1200 1210 1220 1230 220 230 240 250 260 mKIAA0 A-EEKKIAEARTMKLQEFQERLSLKDQLIAQSLLEKQQIYLEMAQLSGLEESAQNRGLFR . ::.. ::::. :.:. :: :: .:: : : :: .:: :...:::.:. . :. mKIAA1 SDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLI 1240 1250 1260 1270 1280 1290 270 280 290 300 310 320 mKIAA0 GGGDPSETLRGEQILRSAMSEIEGIQSLICQRHLGSTSSQVEEGSVSAGLPRRAETFGGY ::.: .. ..: .:. : :..: . ..:..:.. :: : : .: . mKIAA1 KP-DPGEPPQAASLLAAALREAESLQVAVKASKMGDVSQSSEE---SPGGTVLMDTPSTQ 1300 1310 1320 1330 1340 1350 330 340 350 360 370 380 mKIAA0 DSVGSPSKGGSFKRKVSNSDLRPQDWQGPASSPDSRPCDNSAPSGCCEESPQAVEMPSTE : .::. : mKIAA1 DVPASPTACGI 1360 >>mKIAA0651 ( 985 res) mbg06227 (985 aa) initn: 818 init1: 287 opt: 826 Z-score: 445.9 bits: 93.6 E(): 1.1e-19 Smith-Waterman score: 911; 33.436% identity (37.674% ungapped) in 649 aa overlap (2-635:380-970) 10 20 30 mKIAA0 LGVQECILLVTQRITKYPVLVERIIQNTEAG :::::::::::::::::::..::.::... mKIAA0 LKLYKELYARDKRFQQFIRKMTRSAVLKRHGVQECILLVTQRITKYPVLINRILQNSHGV 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA0 TEDYKDLSQALSLIKDIISQVDAKVSEYEKDQRLKEIAAKTDQKSSGKLKNGLTFRKEDM :.:.::..::.:.:...:.:: : : ::. ::.:: . : ... . . : .... mKIAA0 EEEYQDLASALGLVKELLSNVDQDVHELEKEARLQEIYNRMDPRAQTPVPGKGPFGRDEL 410 420 430 440 450 460 100 110 120 130 140 150 mKIAA0 LQQRQLHLEGALCWKSTSGRLKDVLAVLLTDVLLLLQEKDQKYVFASVDSKPPVISLQKL :... .: :: : ::...::.:::: .:.::::..::::::::.:.:.: :: :.:::.: mKIAA0 LRRKLIH-EGCLLWKTATGRFKDVLLLLMTDVLVFLQEKDQKYIFTSLD-KPSVVSLQNL 470 480 490 500 510 520 160 170 180 190 200 210 mKIAA0 IVREVANEEKAMFLISASMQGPEMYEMYTSSKEDRNIWMAHIRRAVESCPDEEEDVFSEA :::..::. :.:::::.. :::::....:..::. :. :...:. ::..:. . :. mKIAA0 IVRDIANQAKGMFLISSG--PPEMYEVHAASRDDRTTWIRVIQQSVRLCPSREDFPLIET 530 540 550 560 570 580 220 230 240 250 260 mKIAA0 EEKKIAEARTMKLQEFQERLSLKDQLIAQSLLEKQQIYLEM-------AQLSGLEESAQN :.: :.... .:. :.: ... : .. ... :: : . :. : mKIAA0 EDKAY-------LRRIKTKLQQKNQALVELLQKNVELFAEMVHFQALKAGFVGMPPPALP 590 600 610 620 630 270 280 290 300 310 320 mKIAA0 RGLFRGGGDPSETLRGEQILRSAMSEIEGIQSLICQRHLGSTSSQVEEGSVSAGLPRRAE ::::: . :.::::..:..:. :.::...:. :: . . : .:: .. mKIAA0 RGLFRL--ESFESLRGERLLKDALREVEGLKDLL----LGPCVD-LPTTSREPALPLDSD 640 650 660 670 680 690 330 340 350 360 370 380 mKIAA0 TFGGYDSVGSPSKGGSFKRKVSNSDLRPQDWQGPASSPDSRPCDNSAPSGCCEESPQAVE . :. .: . ... .:. .. .: : :: : . : .::: mKIAA0 S-GSCPGVTANGEARTFNGSI---ELCRAD-------SDSSQKDRN---GNQLRSPQE-- 700 710 720 730 390 400 410 420 430 440 mKIAA0 MPSTESLPTVLELELVHRVQTLSQLLLSLQAVIAQQDSYVEMQRTAIQER-EKQFRLQST :... . .: :: .::::..::. .: :: :: : .: mKIAA0 -------------EVLQPLINLYGLLHGLQAVVVQQERLMEALFPEGPERWEKLSRANSR 740 750 760 770 780 450 460 470 480 490 500 mKIAA0 RGNLLLEQERQRNFEKQREERAGVEKLQSQLRQEQQRWER---ERARQQQELELAGARLQ :. . . ::: : : ... .. :..: .: .: ::: . :: :::. mKIAA0 DGEAGRAAVASVTPEKQATELALLQRQHTLLQEELRRCQRLGEERATEAGSLE---ARLR 790 800 810 820 830 510 520 530 540 550 mKIAA0 EREGEARQMRQRLDQERTELERQRQAYQHDLERLREAQRAVDRERERLELLRR-FKKQNT : : : : :..: :..:: : .. :: : :. :. :: . .. mKIAA0 ESE----QARALLEREAEEIRRQLAALGQNEPLPAEAPWA----RRPLDPRRRSLPAGDA 840 850 860 870 880 890 560 570 580 590 600 610 mKIAA0 VPGAL-PPEVLAEAQPASHPPSFNGDGLEGHSAPAKAPGTQGSAMLHGTGPDNVERPEVA . .. ::. . . : . . . :. :. . . .. ::. . ::. mKIAA0 LYLSFNPPQPSRGHDRLDLPVTVRSLHRPFDDREAQELGSPEDRLQDSSDPDTGSEEEVS 900 910 920 930 940 950 620 630 640 650 660 670 mKIAA0 RWDSAP--PESRPAKSDVPIQLLSATNQIQRQTAVQQQIPTKLAASTKGGKEKGSKSRGS : : :.. .:.: mKIAA0 SRLSPPHSPRDFTRMQDIPEETESRDGEPTASES 960 970 980 >>mKIAA0380 ( 653 res) mfj03079 (653 aa) initn: 261 init1: 142 opt: 237 Z-score: 143.0 bits: 36.9 E(): 0.0081 Smith-Waterman score: 366; 30.275% identity (32.512% ungapped) in 218 aa overlap (3-206:2-218) 10 20 30 40 50 60 mKIAA0 LGVQECILLVTQRITKYPVLVERIIQNTEAGTEDYKDLSQALSLIKDIISQVDAKVSEYE ... :. ::.::::.:.: ::..: .:: ... : .: . ..:.. :. :.. : mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGGTSEHEKLCRARDQCREILKFVNEAVKQTE 10 20 30 40 50 70 80 90 100 110 mKIAA0 KDQRLKEIAAKTDQKSSGKLKNGLT--FRKEDMLQQRQLHLEGALCWKSTSGRLKDVLAV . .::. . : . . .: :. :.. :. ....: :: : :. .. . :. .. mKIAA0 NRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIH-EGPLTWRISKDKTLDLQVL 60 70 80 90 100 110 120 130 140 150 160 mKIAA0 LLTDVLLLLQEKDQKYVF--------ASVDSKP---PVISLQKLIVREVANEEKAMFLIS :: :...:::....: .. .: ::: ::..:. ...: ::....:.:.: mKIAA0 LLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIIC 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 ASMQGP-EMYEMYTSSKEDRNIWMAHIRRAVESCPDEEEDVFSEAEEKKIAEARTMKLQE .: :: ..::. . .. :.:::: ...::.. . :. mKIAA0 TSELGPPQIYELVALTSSDKNIWMELLEEAVQNATKHPGDAPVLNHPSPPGSQEPAYQGS 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 FQERLSLKDQLIAQSLLEKQQIYLEMAQLSGLEESAQNRGLFRGGGDPSETLRGEQILRS mKIAA0 TSSRVEVNDSEVYPTEREPKKPSEGPGPEQRGQDKQLLAQEGPEQEEDAEELRALPCPPP 240 250 260 270 280 290 740 residues in 1 query sequences 1768277 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:13 2006 done: Mon Mar 27 10:22:14 2006 Scan time: 0.920 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]