FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0396.ptfa, 474 aa vs ./tmplib.26680 library 1768543 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2930+/-0.00426; mu= 15.2098+/- 0.285 mean_var=88.2562+/-20.510, 0's: 0 Z-trim: 22 B-trim: 0 in 0/36 Lambda= 0.1365 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1785 ( 617 res) mph01357 ( 617) 942 196 5.9e-51 mFLJ00246 ( 1454 res) mpm02140 (1454) 184 47 8.5e-06 mKIAA0957 ( 713 res) mfj01140 ( 713) 178 46 1.3e-05 mKIAA1223 ( 600 res) mfj51380 ( 600) 173 45 2.3e-05 mKIAA0172 ( 934 res) mbh02656 ( 934) 172 45 3.4e-05 mKIAA1334 ( 992 res) mpm09174 ( 992) 160 42 0.00018 mKIAA1148 ( 1589 res) mfj27189 (1589) 162 43 0.00018 mKIAA1146 ( 342 res) mbg10449 ( 342) 154 41 0.00022 mKIAA0946 ( 465 res) mbx00001 ( 465) 149 40 0.00052 mKIAA1758 ( 1565 res) mic23055 (1565) 154 41 0.00054 mKIAA0229 ( 1198 res) mpf00455 (1198) 152 41 0.0006 mKIAA1139 ( 1224 res) mpg00286 (1224) 148 40 0.0011 mFLJ00040 ( 638 res) mpm09196 ( 638) 143 39 0.0014 mKIAA1518 ( 587 res) mej02266 ( 587) 142 39 0.0016 mKIAA1575 ( 1724 res) mpf01039 (1724) 146 40 0.0017 mKIAA1250 ( 1693 res) mbg07525 (1693) 145 40 0.0019 mKIAA4146 ( 616 res) msj06308 ( 616) 139 38 0.0024 mKIAA0771 ( 1105 res) mfj22320 (1105) 136 38 0.0051 >>mKIAA1785 ( 617 res) mph01357 (617 aa) initn: 812 init1: 323 opt: 942 Z-score: 1007.2 bits: 196.1 E(): 5.9e-51 Smith-Waterman score: 987; 38.115% identity (41.150% ungapped) in 488 aa overlap (2-474:150-616) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKA .:::::. :::: ....::::. :: : :. mKIAA1 LRAACFDGHLEIVKYLVEHKADLEVSNRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKS 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA0 HCGATALHFAAEAGHIDIVKELIKWRAAIVVNGHGMTPLKVAAESCKADVVELLLSHADC : :::: ::.: .::.: :. . : . .:.::::: :. . ....:..: ::. mKIAA1 VKGNTALHDCAESGSLDIMKMLLMYCAKMEKDGYGMTPLLSASVTGHTNIVDFLTHHAQT 180 190 200 210 220 230 100 110 120 130 140 mKIAA0 DRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPP--IHAY .. ::.:::::::.:.. .. :.. . .: :: :..: ::. : : : : :: mKIAA1 SKTERINALELLGATFVDKKR--DLLGALKYWKKAMNMRYSDRTNIISKPV-PQTLIMAY 240 250 260 270 280 290 150 160 170 180 190 200 mKIAA0 GNRTECRNPQELEAIRQDRDALHMEGLIVRERILGADNIDVSHPIIYRGAVYADNMEFEQ : . .:::.. : : ..:..:..:::::: .. :.:. : ::::::::. .:.. mKIAA1 DYAKEVNSAEELEGLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKR 300 310 320 330 340 350 210 220 230 240 250 mKIAA0 CIKLWLHALHLRQKG----NRNTHKDLLRFAQVFSQMIH------LNEAVKAPDIECVLR ::.:: .:: ..:.. . : ..:: ::..:: :.. :. .: :. .: mKIAA1 CINLWKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTTVTFDDLMGILC 360 370 380 390 400 410 260 270 280 290 300 310 mKIAA0 CSVLEIEQSMNRVKNISDA-DVHSAMDNYECNLYTFLYLVCISTKTQCS-EEDQCRINKQ ::::::....... .: ....:.. .:.:.:. :. :. :.:. . .. mKIAA1 KSVLEIERAIKQTQCPADPLQLNKALS-------IILHLICLLEKVPCTVEQDHFK-KQT 420 430 440 450 460 320 330 340 350 360 370 mKIAA0 IYNLIHLDPRTREGFSLLHLAVNSNTPVDDFHTNDVCSFPNALVTKLLLDCGAEVNAVDN :: ...: :: ...:: :::::..:: . ::.::. :: .:..:::.::. :. mKIAA1 IYRFLKLHPRGKNNFSPLHLAVDKNTTCVGRYP--VCKFPSLQVTAILIECGADVNVRDS 470 480 490 500 510 520 380 390 400 410 420 430 mKIAA0 EGNSALHIIVQYNRPISDFLTLHSIIISLVEAGAHTDMTNKQNKTPLDK-STTGVSEILL . :: ::: . :.: :...: :...::: : :: ...: : . ... :. mKIAA1 DDNSPLHIAALNNHP--DIMNL------LIKSGAHFDATNLHKQTASDLLDEKEIAKNLI 530 540 550 560 570 440 450 460 470 mKIAA0 KTQMKMSLKCLAARAVRANDINYQDQIPRTLEEFVGFH . . .:.:::::.. . : :. .::. :: ::..: mKIAA1 QPINHTTLQCLAARVIVNHRIYYKGNIPEKLETFVSLHR 580 590 600 610 >>mFLJ00246 ( 1454 res) mpm02140 (1454 aa) initn: 435 init1: 132 opt: 184 Z-score: 196.4 bits: 47.3 E(): 8.5e-06 Smith-Waterman score: 184; 42.697% identity (43.182% ungapped) in 89 aa overlap (1-88:274-362) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAK : : :: :. :. :.:. :: . :: :.. mFLJ00 LCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQ 250 260 270 280 290 300 40 50 60 70 80 mKIAA0 AHCGATALHFAAEAGHIDIVKELIKWRAAIVV-NGHGMTPLKVAAESCKADVVELLLSHA . : ::: .: .: ::::: :.. : : : .: ::: :: . ...:...::.:. mFLJ00 SATGNTALTYACAGGFIDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHG 310 320 330 340 350 360 90 100 110 120 130 140 mKIAA0 DCDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAY mFLJ00 AGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 370 380 390 400 410 420 >>mKIAA0957 ( 713 res) mfj01140 (713 aa) initn: 212 init1: 130 opt: 178 Z-score: 193.3 bits: 45.7 E(): 1.3e-05 Smith-Waterman score: 178; 38.000% identity (38.384% ungapped) in 100 aa overlap (2-100:176-275) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKA .::: .:: .: .::: ::. . . : mKIAA0 LHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKN 150 160 170 180 190 200 40 50 60 70 80 90 mKIAA0 HCGATALHFAAEAGHIDIVKELIKWRA-AIVVNGHGMTPLKVAAESCKADVVELLLSHAD . : :::: :: .: .:: :.. : . .::. :.:::..: . .:. :: . . mKIAA0 QAGDTALHVAAALNHKKVVKVLLEAGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 210 220 230 240 250 260 100 110 120 130 140 150 mKIAA0 CDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAYG : :: ..:. mKIAA0 ILRFSRGRSLRKRRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVPQKEEARRDC 270 280 290 300 310 320 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 337 init1: 156 opt: 173 Z-score: 188.7 bits: 44.6 E(): 2.3e-05 Smith-Waterman score: 182; 27.273% identity (30.405% ungapped) in 165 aa overlap (3-164:154-304) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKAH : : .. ..::...:: :. .:: :: . mKIAA1 YILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHVEMVRVLIACHADVNAADN 130 140 150 160 170 180 40 50 60 70 80 mKIAA0 CGATALHFAAEAGHIDIVKELIKWRAAIV--VNGHGMTPLKVAAESCKADVVELLLSH-A .::. :: ::. .:. ::. ..:.: . ..: : : .::. ..:::..:: : : mKIAA1 EKRSALQSAAWQGHVKVVQLLIE-HGAVVDHTCNQGATALCIAAQEGHVDVVQVLLEHGA 190 200 210 220 230 240 90 100 110 120 130 140 mKIAA0 DCDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAY : .. ... . :. :. : . .::.. : . :. :.:.. mKIAA1 DPNHADQFGRTAMRVAA-----------KNGHSQIIKLLEKY--GASSLNGCSPSPVHTM 250 260 270 280 150 160 170 180 190 200 mKIAA0 GNRTECRNPQELEAIRQDRDALHMEGLIVRERILGADNIDVSHPIIYRGAVYADNMEFEQ .. :...... mKIAA1 EQKPPQSAPSKMQSLTIRSNSSGGTGGGDLQPSLRGLPNGPAHAFSSPSESPDSTVDRQK 290 300 310 320 330 340 >>mKIAA0172 ( 934 res) mbh02656 (934 aa) initn: 162 init1: 128 opt: 172 Z-score: 185.6 bits: 44.7 E(): 3.4e-05 Smith-Waterman score: 172; 38.542% identity (42.045% ungapped) in 96 aa overlap (3-93:818-910) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKAH : ::.:. .:. :.:. :: :: : . mKIAA0 AAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKGLLACGADVNIQDD 790 800 810 820 830 840 40 50 60 70 80 mKIAA0 CGATALHFAAEAGHIDIVKELIKWRAAIVVNGH-----GMTPLKVAAESCKADVVELLLS :.::: :.: ::..::: :. : ::: : : :..: :. . :.. :: . mKIAA0 EGSTALMCASEHGHVEIVKLLL---AQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLYA 850 860 870 880 890 900 90 100 110 120 130 140 mKIAA0 HADCDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIH : . .. mKIAA0 HLNFSKAQSPSTPRLGRKTSPGPTHRGSFD 910 920 930 >>mKIAA1334 ( 992 res) mpm09174 (992 aa) initn: 180 init1: 126 opt: 160 Z-score: 172.6 bits: 42.4 E(): 0.00018 Smith-Waterman score: 163; 27.966% identity (28.448% ungapped) in 118 aa overlap (2-117:100-217) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKA .. : .:: .:: . .: ::. .. . mKIAA1 FHLAAAKGHVECLKVMVTHGVDVTAQDSSGHSALHVAAKNGHPECIRKLLQYKSPAENID 70 80 90 100 110 120 40 50 60 70 80 mKIAA0 HCGATALHFAAEAGHIDIVKELIKWRAAIVVNG-HGMTPLKVAAESCKADVVELLLSH-A . : ::::.:: : .. :. : . .. : .. : :: ::... .... ..::.: : mKIAA1 NSGKTALHYAAAQGCLQAVQLLCEHKSPINLKDLDGNIPLLVAVQNGHSEACHFLLDHGA 130 140 150 160 170 180 90 100 110 120 130 140 mKIAA0 DCDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAY : . :.. :. : ... .. : . mKIAA1 DVNSRDKNGRTALMLACETGSSNTVDALIKKGADLSLVDSLGHNALHYSKLSENAGIQNL 190 200 210 220 230 240 >>mKIAA1148 ( 1589 res) mfj27189 (1589 aa) initn: 232 init1: 115 opt: 162 Z-score: 172.6 bits: 43.0 E(): 0.00018 Smith-Waterman score: 162; 39.080% identity (39.535% ungapped) in 87 aa overlap (3-88:687-773) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKAH : ::.:: .:: .: .:: : :. . mKIAA1 FSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDK 660 670 680 690 700 710 40 50 60 70 80 90 mKIAA0 CGATALHFAAEAGHIDIVKELIKWRAAIV-VNGHGMTPLKVAAESCKADVVELLLSHADC : ::: .: ::...:. :. :: .. .: ::: .:: :.::..:..:. mKIAA1 EGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGAM 720 730 740 750 760 770 100 110 120 130 140 150 mKIAA0 DRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAYGN mKIAA1 IEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGCQTLPSRPRGPATWAMATSKPDIMI 780 790 800 810 820 830 >>mKIAA1146 ( 342 res) mbg10449 (342 aa) initn: 275 init1: 131 opt: 154 Z-score: 171.1 bits: 40.5 E(): 0.00022 Smith-Waterman score: 154; 40.299% identity (40.909% ungapped) in 67 aa overlap (3-69:120-185) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKAH : :..:. .:: . .. ::: ::::.. : mKIAA1 RIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEAGADPNGSRH 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA0 CGATALHFAAEAGHIDIVKELIKWRAAIVVNGHGMTPLKVAAESCKADVVELLLSHADCD .: .. :...:. ::.: ::.. : . :: : .:: mKIAA1 HRSTPVYHASRVGRDDILKALIRYGADVDVNHH-LTPDTRPPFSRRLTSLVVCPLYISAA 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA0 RRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAYGNR mKIAA1 YHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHGCEAAFVSLLVEFGA 210 220 230 240 250 260 >>mKIAA0946 ( 465 res) mbx00001 (465 aa) initn: 150 init1: 111 opt: 149 Z-score: 164.3 bits: 39.7 E(): 0.00052 Smith-Waterman score: 149; 35.955% identity (36.782% ungapped) in 89 aa overlap (1-87:160-248) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAK ..: : :. .:: ..: :.. :::. mKIAA0 LHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI 130 140 150 160 170 180 40 50 60 70 80 mKIAA0 AHCGATALHFAAEAGHIDIVKELI-KWRAAIVVNGHGMTPLKVAA-ESCKADVVELLLSH : . .:.::. :: .:: :: : . . ... .::::: :: .. ..: ..:::. mKIAA0 DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 190 200 210 220 230 240 90 100 110 120 130 140 mKIAA0 ADCDRRSRIEALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHA mKIAA0 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLAKQRKNVWM 250 260 270 280 290 300 >>mKIAA1758 ( 1565 res) mic23055 (1565 aa) initn: 142 init1: 115 opt: 154 Z-score: 164.1 bits: 41.4 E(): 0.00054 Smith-Waterman score: 162; 25.852% identity (31.818% ungapped) in 352 aa overlap (2-343:733-1028) 10 20 30 mKIAA0 DNTCLMIAAYKGHTDVVRYLLEQRADPNAKA .. :. :: .:::: :: ::. .: .: mKIAA1 QQAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEARVDAAD 710 720 730 740 750 760 40 50 60 70 80 90 mKIAA0 HCGATALHFAAEAGHIDIVKELIKWRAAIVVNGHG-MTPLKVAAESCKADVVELLLSHAD . : : : :: ::.. .. : . : : .. : .::: .: .. . . ..::: .: mKIAA1 KNGFTPLCVAAAQGHFECIELLTAYNANINHSAAGGQTPLYLACKNGNKECIKLLL-EAG 770 780 790 800 810 820 100 110 120 130 140 mKIAA0 CDRRSRI-EALELLGASFANDRENYDIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAY :: . .. . : : : : : .: : : .: ..:. mKIAA1 TDRSIKTRDGWTPIHA--AVDTGNVDSLK------LLMYHR---------------VRAH 830 840 850 150 160 170 180 190 200 mKIAA0 GNRTECRNPQE-LEAIRQDRDALHMEGLIVRERILGADNIDVSHPIIYRGAVYADNMEFE :: ..:. : .. .. .: :: :. . . .: : . :. mKIAA1 GNSLSSEEPKSGLFSLNGGESPTGPSKPVV-----PADLINHADKEGWTAAHIAASKGFK 860 870 880 890 900 910 210 220 230 240 250 260 mKIAA0 QCIKLWLHALHL----RQKGNRNTHKDLLRFAQVFSQMIHLNEAVKAPDIECVLRCSVLE .:... . : :.: ::..: :. . .. :: : ..: : :: :: : mKIAA1 NCLEVLCRHGGLEPERRDKCNRTVH-DV-----ATDDCKHLLENLNALKIP--LRISVGE 920 930 940 950 960 270 280 290 300 310 320 mKIAA0 IEQSMNRVKNISDADVHSAMDNYECNLYTFLYLVC-ISTKTQCSEEDQCR-INKQIYNLI :. : ...:: ..::. . .: .. . : : :: . ... . : mKIAA1 IQPS----NDVSD--------DFECE-----HTICTLNIRKQTSWEDFSKAVSQALTN-- 970 980 990 1000 330 340 350 360 370 380 mKIAA0 HLDPRTREGF-SLLHLAVNSNTPVDDFHTNDVCSFPNALVTKLLLDCGAEVNAVDNEGNS :.. . .:. :: . :. : mKIAA1 HFQAISSDGWWSLEDGTFNNATDSCIGLGTSSIRSIMLGSMPWSTGQSFSQSPWDFLKKK 1010 1020 1030 1040 1050 1060 474 residues in 1 query sequences 1768543 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:19:47 2006 done: Mon Mar 27 10:19:48 2006 Scan time: 0.660 Display time: 0.160 Function used was FASTA [version 3.4t11 Apr 17, 2002]