FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mKIAA0471.ptfa, 262 aa
 vs ./tmplib.26680 library

1768755 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 7.0680+/-0.00736; mu= 4.3777+/- 0.490
 mean_var=279.4745+/-68.917, 0's: 0 Z-trim: 7  B-trim: 25 in 1/35
 Lambda= 0.0767

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mKIAA4104  ( 1065 res)   mbg15134                  (1065) 1079  132 8.4e-32


>>mKIAA4104  ( 1065 res)   mbg15134                       (1065 aa)
 initn: 1104 init1: 1079 opt: 1079  Z-score: 663.3  bits: 132.4 E(): 8.4e-32
Smith-Waterman score: 1079;  65.992% identity (65.992% ungapped) in 247 aa overlap (1-247:814-1060)

                                             10        20        30
mKIAA0                               EKEYQAMRENQLQQEDPMDRYKRENRRLQE
                                     ::::..:::.: :::::..:..::::::::
mKIAA4 PKRYRSEENAKRLMELACNTKISQKKLKKFEKEYHTMREQQAQQEDPIERFERENRRLQE
           790       800       810       820       830       840   

               40        50        60        70        80        90
mKIAA0 ASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLFTKQRLVETEEEKRKQEE
       :.::::::::::::::::::::::.:::.::.:::.::::::.:::.:...:.:::. ::
mKIAA4 ANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEDEKRRLEE
           850       860       870       880       890       900   

              100       110       120       130       140       150
mKIAA0 ETAQLKEVFRKQLEKAEYEIKKTTAIIAEYKQICSQLSTRLEKQQAASKEELEAVKGKMM
       :.:::::. :..:.::: ::::...::..::::::::: ::::::.:.: :.: .. :. 
mKIAA4 ESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKVEIEKIRQKVD
           910       920       930       940       950       960   

              160       170       180       190       200       210
mKIAA0 ACKHCSDIFSKEGALKPVAVNREDQGLEADDEKDSLKKQLREMELELAQTKLQLVEAKCK
        : .: :.:.::: .: ..  .  .  ..:.::..::.:::::::::::::::::::.::
mKIAA4 DCDRCRDFFNKEGRVKGISSAKGVSDEDTDEEKETLKNQLREMELELAQTKLQLVEAECK
           970       980       990      1000      1010      1020   

              220       230       240       250       260  
mKIAA0 IQELEHQRGALMNEIQAAKNSWFSKTLNSIKTATGTQPLQPPQAPQPPKEST
       ::.:::. :  ..:.::::..::..::.:::::::.:               
mKIAA4 IQDLEHHLGLALSEVQAAKKTWFNRTLSSIKTATGVQGKETC          
          1030      1040      1050      1060               




262 residues in 1 query   sequences
1768755 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:21:37 2006 done: Mon Mar 27 10:21:37 2006
 Scan time:  0.470 Display time:  0.010

Function used was FASTA [version 3.4t11 Apr 17, 2002]