# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg02219.fasta.nr -Q ../query/mKIAA1147.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1147, 357 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921236 sequences Expectation_n fit: rho(ln(x))= 4.7483+/-0.000182; mu= 12.1515+/- 0.010 mean_var=63.3496+/-12.254, 0's: 39 Z-trim: 40 B-trim: 0 in 0/67 Lambda= 0.161140 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|123791334|sp|Q3UHG7.1|LCHN_MOUSE RecName: Full= ( 455) 2455 579.3 5.3e-163 gi|148681639|gb|EDL13586.1| RIKEN cDNA E330009J07 ( 549) 2455 579.4 6.1e-163 gi|123778326|sp|Q0PGW2.1|LCHN_RAT RecName: Full=Pr ( 455) 2452 578.6 8.6e-163 gi|149065331|gb|EDM15407.1| similar to RIKEN cDNA ( 508) 2452 578.6 9.4e-163 gi|194209975|ref|XP_001915240.1| PREDICTED: simila ( 411) 2431 573.7 2.4e-161 gi|73978830|ref|XP_851582.1| PREDICTED: hypothetic ( 557) 2428 573.1 4.8e-161 gi|109068485|ref|XP_001083728.1| PREDICTED: hypoth ( 455) 2427 572.8 4.9e-161 gi|76633632|ref|XP_583518.2| PREDICTED: similar to ( 385) 2417 570.4 2.1e-160 gi|126340768|ref|XP_001368125.1| PREDICTED: simila ( 474) 2314 546.5 4e-153 gi|224095571|ref|XP_002197558.1| PREDICTED: simila ( 441) 2221 524.9 1.2e-146 gi|118082915|ref|XP_425490.2| PREDICTED: similar t ( 391) 2216 523.7 2.5e-146 gi|123903966|sp|Q4FZX0.1|LCHN_XENLA Protein LCHN ( 434) 2109 498.8 8.4e-139 gi|26344115|dbj|BAC35714.1| unnamed protein produc ( 391) 2023 478.8 8.1e-133 gi|123888927|sp|Q1LX49.1|LCHN_DANRE RecName: Full= ( 490) 1973 467.3 3e-129 gi|47218274|emb|CAF96311.1| unnamed protein produc ( 363) 1767 419.3 6.3e-115 gi|134024946|gb|AAI34862.1| Si:ch211-238n5.4 prote ( 410) 1499 357.0 3.9e-96 gi|109068487|ref|XP_001083837.1| PREDICTED: hypoth ( 351) 1482 353.0 5.4e-95 gi|90082154|dbj|BAE90358.1| unnamed protein produc ( 351) 1473 350.9 2.3e-94 gi|198427707|ref|XP_002127536.1| PREDICTED: simila ( 432) 1404 334.9 1.8e-89 gi|115975084|ref|XP_001191211.1| PREDICTED: hypoth (1285) 1409 336.5 1.9e-89 gi|210121594|gb|EEA69305.1| hypothetical protein B ( 283) 1200 287.4 2.5e-75 gi|215506998|gb|EEC16492.1| protein LCHN, putative ( 425) 1168 280.1 5.9e-73 gi|47197254|emb|CAF89180.1| unnamed protein produc ( 225) 995 239.6 4.6e-61 gi|72007674|ref|XP_785244.1| PREDICTED: hypothetic (1305) 1003 242.1 4.9e-61 gi|210126846|gb|EEA74531.1| hypothetical protein B ( 437) 996 240.1 6.6e-61 gi|47221852|emb|CAF98864.1| unnamed protein produc ( 404) 973 234.7 2.5e-59 gi|190585363|gb|EDV25431.1| hypothetical protein T ( 376) 919 222.1 1.4e-55 gi|74143139|dbj|BAE24121.1| unnamed protein produc ( 123) 830 201.1 1e-49 gi|156209345|gb|EDO30639.1| predicted protein [Nem ( 279) 601 148.1 2e-33 gi|115767466|ref|XP_788594.2| PREDICTED: similar t ( 140) 549 135.8 5.3e-30 gi|115975086|ref|XP_001191260.1| PREDICTED: simila ( 144) 549 135.8 5.4e-30 gi|163771367|gb|EDQ85035.1| predicted protein [Mon ( 393) 468 117.3 5.4e-24 gi|114616424|ref|XP_519430.2| PREDICTED: similar t ( 258) 428 107.9 2.5e-21 gi|210106236|gb|EEA54228.1| hypothetical protein B ( 778) 405 102.9 2.3e-19 gi|160704469|gb|EAT90414.2| hypothetical protein S ( 476) 332 85.8 2.1e-14 gi|221127240|ref|XP_002159296.1| PREDICTED: simila ( 211) 281 73.6 4.1e-11 gi|159104896|gb|EDP43784.1| hypothetical protein M ( 598) 207 56.8 1.4e-05 gi|49528157|emb|CAG61814.1| unnamed protein produc ( 454) 194 53.7 9e-05 gi|164641712|gb|EDR05971.1| predicted protein [Lac ( 607) 188 52.4 0.0003 gi|154697956|gb|EDN97694.1| hypothetical protein S ( 532) 181 50.7 0.00083 gi|119396889|gb|EAW07320.1| conserved hypothetical ( 618) 179 50.3 0.0013 gi|90302573|gb|EAS32204.1| hypothetical protein CI ( 624) 170 48.2 0.0055 gi|220701418|gb|EED57756.1| conserved hypothetical ( 566) 168 47.7 0.007 gi|46101580|gb|EAK86813.1| hypothetical protein UM ( 830) 168 47.8 0.0094 >>gi|123791334|sp|Q3UHG7.1|LCHN_MOUSE RecName: Full=Prot (455 aa) initn: 2455 init1: 2455 opt: 2455 Z-score: 3082.7 bits: 579.3 E(): 5.3e-163 Smith-Waterman score: 2455; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:99-455) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::::::::::::: gi|123 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 250 260 270 280 290 300 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR 310 320 330 340 350 360 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 370 380 390 400 410 420 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|123 GDRSFLMDLLEAYGIDVMLVIDNPCCP 430 440 450 >>gi|148681639|gb|EDL13586.1| RIKEN cDNA E330009J07 [Mus (549 aa) initn: 2455 init1: 2455 opt: 2455 Z-score: 3081.6 bits: 579.4 E(): 6.1e-163 Smith-Waterman score: 2455; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:193-549) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::::::::::::: gi|148 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG 170 180 190 200 210 220 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 230 240 250 260 270 280 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 290 300 310 320 330 340 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 350 360 370 380 390 400 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR 410 420 430 440 450 460 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 470 480 490 500 510 520 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|148 GDRSFLMDLLEAYGIDVMLVIDNPCCP 530 540 >>gi|123778326|sp|Q0PGW2.1|LCHN_RAT RecName: Full=Protei (455 aa) initn: 2452 init1: 2452 opt: 2452 Z-score: 3078.9 bits: 578.6 E(): 8.6e-163 Smith-Waterman score: 2452; 99.720% identity (100.000% similar) in 357 aa overlap (1-357:99-455) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::::::::::::: gi|123 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 250 260 270 280 290 300 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|123 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKLNSADREKYRRLNEQR 310 320 330 340 350 360 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 370 380 390 400 410 420 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|123 GDRSFLMDLLEAYGIDVMLVIDNPCCP 430 440 450 >>gi|149065331|gb|EDM15407.1| similar to RIKEN cDNA E330 (508 aa) initn: 2452 init1: 2452 opt: 2452 Z-score: 3078.3 bits: 578.6 E(): 9.4e-163 Smith-Waterman score: 2452; 99.720% identity (100.000% similar) in 357 aa overlap (1-357:152-508) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::::::::::::: gi|149 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKLNSADREKYRRLNEQR 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 430 440 450 460 470 480 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|149 GDRSFLMDLLEAYGIDVMLVIDNPCCP 490 500 >>gi|194209975|ref|XP_001915240.1| PREDICTED: similar to (411 aa) initn: 2431 init1: 2431 opt: 2431 Z-score: 3053.1 bits: 573.7 E(): 2.4e-161 Smith-Waterman score: 2431; 98.880% identity (99.440% similar) in 357 aa overlap (1-357:55-411) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::.:::::::::: gi|194 RAVFLVLGLKKTQVCLSVRTSRNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|194 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLETPGHYSHL 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::: ::.:::::::::::::::::::::::::::::::::::::::::::::: gi|194 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 330 340 350 360 370 380 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|194 GDRSFLMDLLEAYGIDVMLVIDNPCCP 390 400 410 >>gi|73978830|ref|XP_851582.1| PREDICTED: hypothetical p (557 aa) initn: 2428 init1: 2428 opt: 2428 Z-score: 3047.6 bits: 573.1 E(): 4.8e-161 Smith-Waterman score: 2428; 98.599% identity (99.440% similar) in 357 aa overlap (1-357:201-557) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::.:::::::::: gi|739 FLLGVQAWTLSSCRAPAPLAGGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|739 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLETPGHYSHL 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|739 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVRTHHDHLQPLLKINSADREKYRRLNEQR 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::: ::.:::::::::::::::::::::::::::::::::::::::::::::: gi|739 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 480 490 500 510 520 530 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::::: gi|739 GDRSFLMDLLEAYGIDVMLVIDNPCCP 540 550 >>gi|109068485|ref|XP_001083728.1| PREDICTED: hypothetic (455 aa) initn: 2427 init1: 2427 opt: 2427 Z-score: 3047.5 bits: 572.8 E(): 4.9e-161 Smith-Waterman score: 2427; 98.599% identity (99.720% similar) in 357 aa overlap (1-357:99-455) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::.:::::::::: gi|109 LGSKRGLRVHSVLIWSRGPSDGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 AAFYEDKKGVLHAGPGRGSSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 250 260 270 280 290 300 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR 310 320 330 340 350 360 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::::::::: ::.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 370 380 390 400 410 420 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP ::::::.:::::::::::::::::::: gi|109 GDRSFLLDLLEAYGIDVMLVIDNPCCP 430 440 450 >>gi|76633632|ref|XP_583518.2| PREDICTED: similar to LCH (385 aa) initn: 2417 init1: 2417 opt: 2417 Z-score: 3035.9 bits: 570.4 E(): 2.1e-160 Smith-Waterman score: 2417; 97.759% identity (99.440% similar) in 357 aa overlap (1-357:29-385) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKGPF :::::::::::::::::::.:::::::::::: gi|766 MGFCCADNVLLLGLGSSHPGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKGPF 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 FGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAA ::::::::::::::::::::::::::::::::::::.::::::::::::: ::::::::: gi|766 FGLACFANMPVESELERGARMKSVGILSPSYTLLYRHMHFLENQVRHQLETPGHYSHLAA 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 FYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 FYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILW 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 KFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLE :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::.:: gi|766 KFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTVPESKPFFYVNVADIETLE 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 VEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 VEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQM 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 LLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGD :::::::: ::.::::::::::::::::::::::::::.::::::::::::::::::::: gi|766 LLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSSSQDKTLTAEHARGMGLDPQGD 310 320 330 340 350 360 340 350 mKIAA1 RSFLMDLLEAYGIDVMLVIDNPCCP ::::::::::::::::::::::::: gi|766 RSFLMDLLEAYGIDVMLVIDNPCCP 370 380 >>gi|126340768|ref|XP_001368125.1| PREDICTED: similar to (474 aa) initn: 2314 init1: 2314 opt: 2314 Z-score: 2905.3 bits: 546.5 E(): 4e-153 Smith-Waterman score: 2314; 94.118% identity (98.039% similar) in 357 aa overlap (1-357:118-474) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::.:::::::::: gi|126 PLEEEEDQVVAVFVVTFDPRTGNMLEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::::::::::::. :. .:. ::.::::::::::::::::::::::::::::::::::: gi|126 AAFYEDKKGVLHASHGKPNSVHPVHWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI 210 220 230 240 250 260 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES 270 280 290 300 310 320 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR ::.::::::::::::::::..:::::::::::::::.:::::::.::::.:::::::::: gi|126 LEIEVSYVACTTEKIFEEKHDLYDVYVDNQNVKTHHEHLQPLLKLNSADKEKYRRLNEQR 330 340 350 360 370 380 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ ::::::::: : .:::::::::::::::::::::::::::::::::::::::::::::: gi|126 QMLLYSQEVGEDCNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ 390 400 410 420 430 440 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP :::.::::::::::::::::::::::: gi|126 GDRNFLMDLLEAYGIDVMLVIDNPCCP 450 460 470 >>gi|224095571|ref|XP_002197558.1| PREDICTED: similar to (441 aa) initn: 2221 init1: 2221 opt: 2221 Z-score: 2788.9 bits: 524.9 E(): 1.2e-146 Smith-Waterman score: 2221; 89.888% identity (95.787% similar) in 356 aa overlap (1-356:85-440) 10 20 30 mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG :::::::::::::::::::.:::::::::: gi|224 RAEAEEDQIVAVFVVTFDPRTGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|224 LCFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI :::.:::::: . : .: ::.::::::::::::::::::::::::::::::::::. gi|224 EAFYDDKKGVLPDSKGTPSSQQPVHWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILV 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES :::::::::::::::::::::::::::::::::::::::.:::.::::::::::::::: gi|224 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGLGGTVPESKPFFYVNVADIEM 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR ::.::::::::::::::.::.:::::::::::::::.:::::::::.::.:::::::.:: gi|224 LETEVSYVACTTEKIFEQKRDLYDVYVDNQNVKTHHEHLQPLLKINNADKEKYRRLNDQR 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ :::.::::: : : ::::::.:::.::::::::::.::::::::::::.:::::::::: gi|224 QMLMYSQEVGEDCSSCEEDLFILFFMEQNNRIFQTLMEVSASQDKTLTADHARGMGLDPQ 360 370 380 390 400 410 340 350 mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP :::::::::::.:::::::::::::: gi|224 GDRSFLMDLLEVYGIDVMLVIDNPCCT 420 430 440 357 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:39:17 2009 done: Thu Mar 12 22:45:26 2009 Total Scan time: 844.910 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]