# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg02219.fasta.nr -Q ../query/mKIAA1147.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA1147, 357 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7921236 sequences
Expectation_n fit: rho(ln(x))= 4.7483+/-0.000182; mu= 12.1515+/- 0.010
mean_var=63.3496+/-12.254, 0's: 39 Z-trim: 40 B-trim: 0 in 0/67
Lambda= 0.161140
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|123791334|sp|Q3UHG7.1|LCHN_MOUSE RecName: Full= ( 455) 2455 579.3 5.3e-163
gi|148681639|gb|EDL13586.1| RIKEN cDNA E330009J07 ( 549) 2455 579.4 6.1e-163
gi|123778326|sp|Q0PGW2.1|LCHN_RAT RecName: Full=Pr ( 455) 2452 578.6 8.6e-163
gi|149065331|gb|EDM15407.1| similar to RIKEN cDNA ( 508) 2452 578.6 9.4e-163
gi|194209975|ref|XP_001915240.1| PREDICTED: simila ( 411) 2431 573.7 2.4e-161
gi|73978830|ref|XP_851582.1| PREDICTED: hypothetic ( 557) 2428 573.1 4.8e-161
gi|109068485|ref|XP_001083728.1| PREDICTED: hypoth ( 455) 2427 572.8 4.9e-161
gi|76633632|ref|XP_583518.2| PREDICTED: similar to ( 385) 2417 570.4 2.1e-160
gi|126340768|ref|XP_001368125.1| PREDICTED: simila ( 474) 2314 546.5 4e-153
gi|224095571|ref|XP_002197558.1| PREDICTED: simila ( 441) 2221 524.9 1.2e-146
gi|118082915|ref|XP_425490.2| PREDICTED: similar t ( 391) 2216 523.7 2.5e-146
gi|123903966|sp|Q4FZX0.1|LCHN_XENLA Protein LCHN ( 434) 2109 498.8 8.4e-139
gi|26344115|dbj|BAC35714.1| unnamed protein produc ( 391) 2023 478.8 8.1e-133
gi|123888927|sp|Q1LX49.1|LCHN_DANRE RecName: Full= ( 490) 1973 467.3 3e-129
gi|47218274|emb|CAF96311.1| unnamed protein produc ( 363) 1767 419.3 6.3e-115
gi|134024946|gb|AAI34862.1| Si:ch211-238n5.4 prote ( 410) 1499 357.0 3.9e-96
gi|109068487|ref|XP_001083837.1| PREDICTED: hypoth ( 351) 1482 353.0 5.4e-95
gi|90082154|dbj|BAE90358.1| unnamed protein produc ( 351) 1473 350.9 2.3e-94
gi|198427707|ref|XP_002127536.1| PREDICTED: simila ( 432) 1404 334.9 1.8e-89
gi|115975084|ref|XP_001191211.1| PREDICTED: hypoth (1285) 1409 336.5 1.9e-89
gi|210121594|gb|EEA69305.1| hypothetical protein B ( 283) 1200 287.4 2.5e-75
gi|215506998|gb|EEC16492.1| protein LCHN, putative ( 425) 1168 280.1 5.9e-73
gi|47197254|emb|CAF89180.1| unnamed protein produc ( 225) 995 239.6 4.6e-61
gi|72007674|ref|XP_785244.1| PREDICTED: hypothetic (1305) 1003 242.1 4.9e-61
gi|210126846|gb|EEA74531.1| hypothetical protein B ( 437) 996 240.1 6.6e-61
gi|47221852|emb|CAF98864.1| unnamed protein produc ( 404) 973 234.7 2.5e-59
gi|190585363|gb|EDV25431.1| hypothetical protein T ( 376) 919 222.1 1.4e-55
gi|74143139|dbj|BAE24121.1| unnamed protein produc ( 123) 830 201.1 1e-49
gi|156209345|gb|EDO30639.1| predicted protein [Nem ( 279) 601 148.1 2e-33
gi|115767466|ref|XP_788594.2| PREDICTED: similar t ( 140) 549 135.8 5.3e-30
gi|115975086|ref|XP_001191260.1| PREDICTED: simila ( 144) 549 135.8 5.4e-30
gi|163771367|gb|EDQ85035.1| predicted protein [Mon ( 393) 468 117.3 5.4e-24
gi|114616424|ref|XP_519430.2| PREDICTED: similar t ( 258) 428 107.9 2.5e-21
gi|210106236|gb|EEA54228.1| hypothetical protein B ( 778) 405 102.9 2.3e-19
gi|160704469|gb|EAT90414.2| hypothetical protein S ( 476) 332 85.8 2.1e-14
gi|221127240|ref|XP_002159296.1| PREDICTED: simila ( 211) 281 73.6 4.1e-11
gi|159104896|gb|EDP43784.1| hypothetical protein M ( 598) 207 56.8 1.4e-05
gi|49528157|emb|CAG61814.1| unnamed protein produc ( 454) 194 53.7 9e-05
gi|164641712|gb|EDR05971.1| predicted protein [Lac ( 607) 188 52.4 0.0003
gi|154697956|gb|EDN97694.1| hypothetical protein S ( 532) 181 50.7 0.00083
gi|119396889|gb|EAW07320.1| conserved hypothetical ( 618) 179 50.3 0.0013
gi|90302573|gb|EAS32204.1| hypothetical protein CI ( 624) 170 48.2 0.0055
gi|220701418|gb|EED57756.1| conserved hypothetical ( 566) 168 47.7 0.007
gi|46101580|gb|EAK86813.1| hypothetical protein UM ( 830) 168 47.8 0.0094
>>gi|123791334|sp|Q3UHG7.1|LCHN_MOUSE RecName: Full=Prot (455 aa)
initn: 2455 init1: 2455 opt: 2455 Z-score: 3082.7 bits: 579.3 E(): 5.3e-163
Smith-Waterman score: 2455; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:99-455)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
::::::::::::::::::::::::::::::
gi|123 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG
70 80 90 100 110 120
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
130 140 150 160 170 180
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
190 200 210 220 230 240
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
250 260 270 280 290 300
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
310 320 330 340 350 360
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
370 380 390 400 410 420
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|123 GDRSFLMDLLEAYGIDVMLVIDNPCCP
430 440 450
>>gi|148681639|gb|EDL13586.1| RIKEN cDNA E330009J07 [Mus (549 aa)
initn: 2455 init1: 2455 opt: 2455 Z-score: 3081.6 bits: 579.4 E(): 6.1e-163
Smith-Waterman score: 2455; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:193-549)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
::::::::::::::::::::::::::::::
gi|148 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG
170 180 190 200 210 220
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
230 240 250 260 270 280
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
290 300 310 320 330 340
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
350 360 370 380 390 400
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
410 420 430 440 450 460
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
470 480 490 500 510 520
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|148 GDRSFLMDLLEAYGIDVMLVIDNPCCP
530 540
>>gi|123778326|sp|Q0PGW2.1|LCHN_RAT RecName: Full=Protei (455 aa)
initn: 2452 init1: 2452 opt: 2452 Z-score: 3078.9 bits: 578.6 E(): 8.6e-163
Smith-Waterman score: 2452; 99.720% identity (100.000% similar) in 357 aa overlap (1-357:99-455)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
::::::::::::::::::::::::::::::
gi|123 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG
70 80 90 100 110 120
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
130 140 150 160 170 180
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
190 200 210 220 230 240
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
250 260 270 280 290 300
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|123 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKLNSADREKYRRLNEQR
310 320 330 340 350 360
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
370 380 390 400 410 420
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|123 GDRSFLMDLLEAYGIDVMLVIDNPCCP
430 440 450
>>gi|149065331|gb|EDM15407.1| similar to RIKEN cDNA E330 (508 aa)
initn: 2452 init1: 2452 opt: 2452 Z-score: 3078.3 bits: 578.6 E(): 9.4e-163
Smith-Waterman score: 2452; 99.720% identity (100.000% similar) in 357 aa overlap (1-357:152-508)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
::::::::::::::::::::::::::::::
gi|149 LGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKG
130 140 150 160 170 180
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
190 200 210 220 230 240
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
250 260 270 280 290 300
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
310 320 330 340 350 360
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|149 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKLNSADREKYRRLNEQR
370 380 390 400 410 420
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
430 440 450 460 470 480
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|149 GDRSFLMDLLEAYGIDVMLVIDNPCCP
490 500
>>gi|194209975|ref|XP_001915240.1| PREDICTED: similar to (411 aa)
initn: 2431 init1: 2431 opt: 2431 Z-score: 3053.1 bits: 573.7 E(): 2.4e-161
Smith-Waterman score: 2431; 98.880% identity (99.440% similar) in 357 aa overlap (1-357:55-411)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
:::::::::::::::::::.::::::::::
gi|194 RAVFLVLGLKKTQVCLSVRTSRNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG
30 40 50 60 70 80
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
gi|194 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLETPGHYSHL
90 100 110 120 130 140
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
150 160 170 180 190 200
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
210 220 230 240 250 260
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
270 280 290 300 310 320
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
:::::::::: ::.::::::::::::::::::::::::::::::::::::::::::::::
gi|194 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
330 340 350 360 370 380
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|194 GDRSFLMDLLEAYGIDVMLVIDNPCCP
390 400 410
>>gi|73978830|ref|XP_851582.1| PREDICTED: hypothetical p (557 aa)
initn: 2428 init1: 2428 opt: 2428 Z-score: 3047.6 bits: 573.1 E(): 4.8e-161
Smith-Waterman score: 2428; 98.599% identity (99.440% similar) in 357 aa overlap (1-357:201-557)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
:::::::::::::::::::.::::::::::
gi|739 FLLGVQAWTLSSCRAPAPLAGGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG
180 190 200 210 220 230
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
gi|739 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLETPGHYSHL
240 250 260 270 280 290
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
300 310 320 330 340 350
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
360 370 380 390 400 410
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|739 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVRTHHDHLQPLLKINSADREKYRRLNEQR
420 430 440 450 460 470
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
:::::::::: ::.::::::::::::::::::::::::::::::::::::::::::::::
gi|739 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
480 490 500 510 520 530
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::::
gi|739 GDRSFLMDLLEAYGIDVMLVIDNPCCP
540 550
>>gi|109068485|ref|XP_001083728.1| PREDICTED: hypothetic (455 aa)
initn: 2427 init1: 2427 opt: 2427 Z-score: 3047.5 bits: 572.8 E(): 4.9e-161
Smith-Waterman score: 2427; 98.599% identity (99.720% similar) in 357 aa overlap (1-357:99-455)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
:::::::::::::::::::.::::::::::
gi|109 LGSKRGLRVHSVLIWSRGPSDGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG
70 80 90 100 110 120
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
130 140 150 160 170 180
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|109 AAFYEDKKGVLHAGPGRGSSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
190 200 210 220 230 240
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
250 260 270 280 290 300
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
310 320 330 340 350 360
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
:::::::::: ::.::::::::::::::::::::::::::::::::::::::::::::::
gi|109 QMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
370 380 390 400 410 420
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
::::::.::::::::::::::::::::
gi|109 GDRSFLLDLLEAYGIDVMLVIDNPCCP
430 440 450
>>gi|76633632|ref|XP_583518.2| PREDICTED: similar to LCH (385 aa)
initn: 2417 init1: 2417 opt: 2417 Z-score: 3035.9 bits: 570.4 E(): 2.1e-160
Smith-Waterman score: 2417; 97.759% identity (99.440% similar) in 357 aa overlap (1-357:29-385)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKGPF
:::::::::::::::::::.::::::::::::
gi|766 MGFCCADNVLLLGLGSSHPGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKGPF
10 20 30 40 50 60
40 50 60 70 80 90
mKIAA1 FGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAA
::::::::::::::::::::::::::::::::::::.::::::::::::: :::::::::
gi|766 FGLACFANMPVESELERGARMKSVGILSPSYTLLYRHMHFLENQVRHQLETPGHYSHLAA
70 80 90 100 110 120
100 110 120 130 140 150
mKIAA1 FYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 FYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILW
130 140 150 160 170 180
160 170 180 190 200 210
mKIAA1 KFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLE
:::::::::::::::::::::::::::::::::::::::::.:::::::::::::::.::
gi|766 KFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTVPESKPFFYVNVADIETLE
190 200 210 220 230 240
220 230 240 250 260 270
mKIAA1 VEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 VEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQM
250 260 270 280 290 300
280 290 300 310 320 330
mKIAA1 LLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGD
:::::::: ::.::::::::::::::::::::::::::.:::::::::::::::::::::
gi|766 LLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSSSQDKTLTAEHARGMGLDPQGD
310 320 330 340 350 360
340 350
mKIAA1 RSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::::::::::::::::
gi|766 RSFLMDLLEAYGIDVMLVIDNPCCP
370 380
>>gi|126340768|ref|XP_001368125.1| PREDICTED: similar to (474 aa)
initn: 2314 init1: 2314 opt: 2314 Z-score: 2905.3 bits: 546.5 E(): 4e-153
Smith-Waterman score: 2314; 94.118% identity (98.039% similar) in 357 aa overlap (1-357:118-474)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
:::::::::::::::::::.::::::::::
gi|126 PLEEEEDQVVAVFVVTFDPRTGNMLEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG
90 100 110 120 130 140
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 HFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
150 160 170 180 190 200
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
:::::::::::::. :. .:. ::.:::::::::::::::::::::::::::::::::::
gi|126 AAFYEDKKGVLHASHGKPNSVHPVHWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
210 220 230 240 250 260
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
270 280 290 300 310 320
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::.::::::::::::::::..:::::::::::::::.:::::::.::::.::::::::::
gi|126 LEIEVSYVACTTEKIFEEKHDLYDVYVDNQNVKTHHEHLQPLLKLNSADKEKYRRLNEQR
330 340 350 360 370 380
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
::::::::: : .::::::::::::::::::::::::::::::::::::::::::::::
gi|126 QMLLYSQEVGEDCNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
390 400 410 420 430 440
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::.:::::::::::::::::::::::
gi|126 GDRNFLMDLLEAYGIDVMLVIDNPCCP
450 460 470
>>gi|224095571|ref|XP_002197558.1| PREDICTED: similar to (441 aa)
initn: 2221 init1: 2221 opt: 2221 Z-score: 2788.9 bits: 524.9 E(): 1.2e-146
Smith-Waterman score: 2221; 89.888% identity (95.787% similar) in 356 aa overlap (1-356:85-440)
10 20 30
mKIAA1 QDIDLEGVEFKSMASGSHKVQSDFIYFRKG
:::::::::::::::::::.::::::::::
gi|224 RAEAEEDQIVAVFVVTFDPRTGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKG
60 70 80 90 100 110
40 50 60 70 80 90
mKIAA1 PFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|224 LCFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHL
120 130 140 150 160 170
100 110 120 130 140 150
mKIAA1 AAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILI
:::.:::::: . : .: ::.::::::::::::::::::::::::::::::::::.
gi|224 EAFYDDKKGVLPDSKGTPSSQQPVHWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILV
180 190 200 210 220 230
160 170 180 190 200 210
mKIAA1 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIES
:::::::::::::::::::::::::::::::::::::::.:::.:::::::::::::::
gi|224 LWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGLGGTVPESKPFFYVNVADIEM
240 250 260 270 280 290
220 230 240 250 260 270
mKIAA1 LEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQR
::.::::::::::::::.::.:::::::::::::::.:::::::::.::.:::::::.::
gi|224 LETEVSYVACTTEKIFEQKRDLYDVYVDNQNVKTHHEHLQPLLKINNADKEKYRRLNDQR
300 310 320 330 340 350
280 290 300 310 320 330
mKIAA1 QMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQ
:::.::::: : : ::::::.:::.::::::::::.::::::::::::.::::::::::
gi|224 QMLMYSQEVGEDCSSCEEDLFILFFMEQNNRIFQTLMEVSASQDKTLTADHARGMGLDPQ
360 370 380 390 400 410
340 350
mKIAA1 GDRSFLMDLLEAYGIDVMLVIDNPCCP
:::::::::::.::::::::::::::
gi|224 GDRSFLMDLLEVYGIDVMLVIDNPCCT
420 430 440
357 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Thu Mar 12 22:39:17 2009 done: Thu Mar 12 22:45:26 2009
Total Scan time: 844.910 Total Display time: 0.090
Function used was FASTA [version 34.26.5 April 26, 2007]