Comparison of KIAA cDNA sequences between mouse and human (FLJ00358)

<<Original sequence data>>

mouse  mFLJ00358 (mbg02077)     length:   4714 bp, CDS:  3860 -  4531
human     (sh03894)     length:   5426 bp, CDS:  1915 -  2568

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     10 -  1981     781      966      55.3
  CDS:   1982 -  2664     269      385      58.9
3'UTR:   2665 -  5544    1342      944      41.3

amino acid

  CDS:   1982 -  2664      35      183      83.9
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mbg02077     1 CTGGGAGCCCTTGCAGTTTTTCGAATCCTCTCCTGCTGCCCGGGTTTACC 50
                         |    |||| | |  |        |   || ||      |
sh03894      1 .........ATCTTTGTTTCTGGCCTGGATAGTGGGGCCCTGGCCACCTC 41

            51 ----+----*----+----*----+----*----+----*----+----* 100
mbg02077    51 TCTGCGGTCCTCTGTCACTGAGCTATTTCCTTTTTTTCACGTGTGTGC.G 99
                 || |  |||  ||| | | | | |         | |   |||   | |
sh03894     42 GGTGTGCCCCTTCGTCTCCGGGGTCTCCAGGGGCCTGCTGCTGTCCACTG 91

           101 ----+----*----+----*----+----*----+----*----+----* 150
mbg02077   100 CCCACGCAGAGGACAGCTTCCTGAAGTCAGTCCTCTCCTACCATGCTGGT 149
                 | | |||    ||||| | ||| | ||       ||||   ||| || 
sh03894     92 GGCTCTCAGGACCCAGCTGCATGATGCCA.......CCTAAACTGCAGGG 134

           151 ----+----*----+----*----+----*----+----*----+----* 200
mbg02077   150 CCCCTGATCCAAATCGGATTTTCAAACTTGGTAGCAAGTGCCTTTACCTG 199
               |||    ||||| ||       | | |  || ||||    ||  ||    
sh03894    135 CCC....TCCAAGTCCCCAGCACCAGCGGGGCAGCA....CCAGTAGGGC 176

           201 ----+----*----+----*----+----*----+----*----+----* 250
mbg02077   200 CTGAGCCACCTCCCTCAACCCTACATTCTTTGAACTCTTCAGCTCCTAGA 249
               |||  || | |     |    |  |     |||  ||  |  |  |    
sh03894    177 CTGGACCTCTTTGAGAATATGTTGAAAAGCTGACATCAACCTCGACGCTG 226

           251 ----+----*----+----*----+----*----+----*----+----* 300
mbg02077   250 GGGTTGCCTCCCTACTATGACTGGCCCGGTGAGGCATGCCAGAGCAGACA 299
                || ||     |               |||| | |   || | ||  || 
sh03894    227 TGGATGTTGGGCCTGATCATTCTTTGGGGTGGGTCTGTCCTGGGC..ACT 274

           301 ----+----*----+----*----+----*----+----*----+----* 350
mbg02077   300 GTCATATGTAGGTCATCCTAGAGCCCTTACAGTAGCTTGGTTGCTTGTAA 349
               |     ||     || |||  | ||  | |       ||||  |    ||
sh03894    275 GCAGGGTGCTAAGCAGCCTCCACCCAGTCC...CCAGTGGTGACACCCAA 321

           351 ----+----*----+----*----+----*----+----*----+----* 400
mbg02077   350 CACCAGGGCCTGGTTTTATGTCTGTGATCACAATGCTTGGGCTTTGTGGC 399
                ||   | || |   |  || | |   || | | |   | |  | |   |
sh03894    322 AACTGTGTCCAGACAT..TGACAGGTGTCTCCAGGAGGGAGACTCGCCTC 369

           401 ----+----*----+----*----+----*----+----*----+----* 450
mbg02077   400 AGTGAGTGAA..TAATCCCGGCTTACAGTACCCAGTGGCCCCATCTGTGA 447
                 |  | |||    | || | || ||||| |       || |     |||
sh03894    370 CATCTGAGAAGCAGAACCAGCCTGACAGTCC......ACCTCCCGGCTGA 413

           451 ----+----*----+----*----+----*----+----*----+----* 500
mbg02077   448 CATGAGGTCCCACATGCTGTCTGTCCTCTCCATATAACACTGGCAGGTCC 497
                | | | |  ||  |||  | || | ||  | |   |  ||||  |  | 
sh03894    414 AAAGTGCTTGCATGTGCGATTTGCCTTCCGCCTGGGAGTCTGGGGGCACT 463

           501 ----+----*----+----*----+----*----+----*----+----* 550
mbg02077   498 CAGAGGCTTATGTCTTTAATGTCTTTCTTCCACAGCTTTATTTTCTCTGG 547
                 || ||     |         ||  ||| || |||| | |  ||||   
sh03894    464 GGGATGCCATCCTTGCCCCACCCTGGCTTTCAGAGCTCTCTCCTCTCCTC 513

           551 ----+----*----+----*----+----*----+----*----+----* 600
mbg02077   548 CTGCCCTGCACATG.................................GTT 564
               ||    ||| ||||                                 | |
sh03894    514 CTCGTGTGCCCATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGT 563

           601 ----+----*----+----*----+----*----+----*----+----* 650
mbg02077   565 GTTGAGTGGAAGTGGGTCTTCCAGGTCCT..................... 593
                 |||| |     | || || | || |||                     
sh03894    564 CCTGAGGGAGCAGGTGTGTTTCTGGGCCTGAGGCTGCTCCTTGGTAGTGA 613

           651 ----+----*----+----*----+----*----+----*----+----* 700
mbg02077   594 ............GCCCCATGCAGGATGGAGAACTAGTTAACTGTAGAAGT 631
                           |  || ||   |  |       || |  ||| |     
sh03894    614 GGGTGTCCCCACGAGCCGTGTCTGTGGCGCCTGCAGCTGCCTGCATGTCC 663

           701 ----+----*----+----*----+----*----+----*----+----* 750
mbg02077   632 ATCTGGAATCATGACTGAGAGTTCCTCCCCATATGGCAGACTCAGGATAC 681
               |||||    ||   |||    |    | |    |    | | || | |  
sh03894    664 ATCTGTGTCCACATCTGCCTTTGAGCCTCATCTTCCTGGCCCCACGGTTT 713

           751 ----+----*----+----*----+----*----+----*----+----* 800
mbg02077   682 TGGCATACGTAGGGACAGCCACAGGCAGGAAACTGAGG............ 719
               |  ||| |   |   ||   | || || | |    |||            
sh03894    714 TCTCATGCTGTGACCCA...AAAGCCAAGCATTCCAGGGTGTTCTGCTGA 760

           801 ----+----*----+----*----+----*----+----*----+----* 850
mbg02077   720 ....................CCTCCCCTTGCTTGACTTGTCTAGAAAA.. 747
                                    ||| ||| |||  | |      || ||  
sh03894    761 AATTGAGTTGTGAGCGTGTCTCTCTCCTCGCTCCAGTCTGAAGGAGAAGC 810

           851 ----+----*----+----*----+----*----+----*----+----* 900
mbg02077   748 .CATACTGCAGGTTGAGACCCCAGAAATTACACACCTGATAAGATGTGTG 796
                    | | || | ||   | ||||  ||       |  | |  | ||| 
sh03894    811 GTGGTCGGTAGATAGACGTCTCAGACCTTTGTGTTTTCTTCACGTCTGTC 860

           901 ----+----*----+----*----+----*----+----*----+----* 950
mbg02077   797 GCTAGGCATGAGGTCTGTGACTAGGAGGAGGAAGGACAACTCTAGAAGGG 846
                 | |||| |   |       | |  |  |      |||  ||     | 
sh03894    861 TGTTGGCAGGTCCTTACACTATTGTGGTTGCTTTAGCAA..CTTAGCTGT 908

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mbg02077   847 AGGTCACTCAATAGGTGT......GTGCTGCAGAAAGTGTCAAAGTAGCG 890
                |   ||| |||  || |      || |||||| ||| |   |||   ||
sh03894    909 TGTCGACTTAATGTGTTTCATGACGTTCTGCAGCAAG.GAAGAAGGTCCG 957

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbg02077   891 AGGGCCAAGCCTTTGACACGGA.........................ATG 915
               ||   | |  ||    || | |                            
sh03894    958 AGTTTCCACTCTCAATCAGGCACCTTCGTTCCCCTCCCCCCTCACTTGAC 1007

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbg02077   916 ATAGCGGCGGCTGAGATGGACCTTCGTAAGGAGGTTAGAGTGCAGTTG.. 963
                |   |  || || |  |   || |      || | ||| ||| |  |  
sh03894   1008 TTCCTGTGGGGTGTGTGGTGTCTGCACTTATAGATGAGAATGCTGAGGCC 1057

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbg02077   964 ......GGGAAAGGTTCAGGTGGTGGTTGATGGAACCAGCAGGCTTAAAG 1007
                     ||| ||||  |  |     | | | ||||||   || |    ||
sh03894   1058 TCAGGAGGGCAAGGGACTCGCCCACGGTCACGGAACCCTAAGTC....AG 1103

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbg02077  1008 ATGATGGGAGTGACCCGGAGGGGAGTGTGAGGGACAGCACTCCCTTTCCT 1057
                 |  | ||  |||||   |  |   |       |  |   ||||   | 
sh03894   1104 GGGTGGAGAAGGACCCCCTGACGCCAGCCCACCTCCCCTGCCCCTCAGCA 1153

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbg02077  1058 GGCCTTGGTTCACTTTGTCTCCAGCTTGGTCAGGTGTTCTTTCTCACTGG 1107
               ||||| | | ||      | |      |  |   ||||  | |||   ||
sh03894   1154 GGCCTGGCTCCA.....GCACAGAGAAGAGCCATTGTTGCTGCTCTGGGG 1198

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbg02077  1108 ACCACAGGTCCTTCCAAGCCCTCTGTGTCTAAGGGGTGTTAAATGAGGAG 1157
                ||  |||  | |   |      ||| ||       ||||    |||   
sh03894   1199 GCCCTAGGAGCCTGGGA......TGTATCCTGCCTTTGTTTCTAGAGCCT 1242

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbg02077  1158 GCCTTGATTATAAAGCCAGTGTCTCTGAACATTG.ACCTTGTGGATATTT 1206
                  ||  || ||   ||  ||||||   |||| | |    |  |  |   
sh03894   1243 TTGTTTGTTGTATTTCCTCTGTCTCCAGACATCGCAGGCCGGTGGGACCC 1292

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbg02077  1207 GGAGCGGGGTCATTCACTGATA.....GCCTGTTCTGGGCTATTCAGG.. 1249
               || ||  |  ||  | |   ||     |||||||| || |  |   ||  
sh03894   1293 GGCGCCTGTGCACGCTCACGTAGCGGGGCCTGTTCGGGTCCCTCGTGGGT 1342

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbg02077  1250 ..................GTCTTGGACAGAGTCTCTGGTCCCCACCTGCT 1281
                                 ||| | | |  ||   |  ||| ||    |  
sh03894   1343 CCCTTCAGTTCGAGCTCTGTCCTTGCCTCAGCGGCCCGTCACCCATAGGG 1392

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbg02077  1282 CTGTAGGTGTGCTCCCAGTTACAGA.TGTGGCCTGGTGTTGTCTTGGTTC 1330
                 | ||   ||  ||  |  |  || || |     |||  | |   || |
sh03894   1393 TGGCAGAGATGGGCCGGGGGAGGGAGTGGGCAGCAGTGCGGACCGAGTCC 1442

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mbg02077  1331 CCACCTGCTCTGTGCTAGAAGTGCTCCCAACTCCATTCTAGGAGTGCTGT 1380
                  |       ||       |||||     |     | | || |   || 
sh03894   1443 TGGCGCATGGGGTTTCCCTGGTGCTGGAGCCGGGCGTTTCGGGGGTGTG. 1491

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mbg02077  1381 AGATTCCAGGTGTGGCCTGGTGTCTCTTGGAGACACCTGGTGTCAT.... 1426
                     | ||  |||  |  | || | || |  | ||   || |||    
sh03894   1492 ....GGCGGGGCTGGGGTCATATCCCCTGCATGCCCCGCATGCCATGGCT 1537

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mbg02077  1427 ...CTGCATCTTTGAGAATTGCTACCTGGGAGCT..GGGGACTTGTTGGT 1471
                  ||         |||  || |    |  ||||  ||| |  ||  |||
sh03894   1538 GTACTCACATGGCAAGAGGTGGTGATCGCCAGCTCAGGGAAGGTGGGGGT 1587

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbg02077  1472 ACTATCTTTGTCCTTGCTCTGGCTGTCATAGCTGTCCTCTCA........ 1513
                |  || |  |         ||     || |  |||| || |        
sh03894   1588 TCCTTCATCCTGTGGAGAGGGGGCTGAATTGGGGTCCCCTGAGCTGTAGG 1637

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbg02077  1514 .......GTGTGTCCCTGAATTGTTAGGGACTGGGATATCCCTCTCACCA 1556
                      |  || |      | |  |||| |  ||  ||     ||  ||
sh03894   1638 GTGCAGTGCCTGACAGGCCGTGGGGAGGGCCGAGGGGATGGGGATCGACA 1687

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbg02077  1557 GTGGTCTTACACCTCAGATTCTCAGGGATCCAAAAATGTGTGTGTGTGGA 1606
               |    |   | | |      | | ||    ||    ||  ||        
sh03894   1688 GGCCCCGGGCCCATGCCGCCCCCTGG....CACGGGTGGATGCCCCGCCT 1733

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbg02077  1607 CCCACAGCTGCCTGAGTGTCATGTGTCTCCCTTTGCCTGTTATCCATGTC 1656
               |||   | ||||    ||   |||| | |||             ||||||
sh03894   1734 CCCGGGGGTGCCCAGCTGGACTGTGGCACCCCCAAAGGACCCCACATGTC 1783

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbg02077  1657 TCTCTGTCCC...TGTGGATTTATATGCTGTGACCTAAAACCCAGGTGTA 1703
                |    ||||      || ||   | |    ||| |  |  || |  || 
sh03894   1784 ACCTGTTCCCCCGCAGGGCTTCCCACGGCACGACATGGAGACCTGTGGTT 1833

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbg02077  1704 GGTTGATATCCT...GTTAAAATTGCACCATGAGCCAGGTGTGCTGGTGC 1750
               |   |    |||   | |    ||| |||  ||    | || ||    ||
sh03894   1834 GCGAGGCTCCCTGGGGCTCGGCTTGGACCGCGATGGGGCTGGGCCCTGGC 1883

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
                                                 G  R  R  I  S  E
mbg02077  1751 ACGCT.TTTAATCCCAGCACTTGGGAGGCAG..AGGCAGGCGGATTTCTG 1797
                  ||       |      || ||| || ||   ||  ||||   | |  
sh03894   1884 CTCCTAACGGGGCTGCTGTCTGGGGCGGTAGCTGGGGGGGCGCTCTCCCC 1933
                                              L  G  G  R  S  P  P

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
                 F  Q  D  S  Q  G  Y  T  K  E  P  C  L  K  K  Q  
mbg02077  1798 AGTTCCAGGACAGCCAGGGCTATACAAAGGAACCCTGTCTCAAAAAACAA 1847
                 | || |     |   |      ||      ||||| |     |  |  
sh03894   1934 CCTGCCCGCGACTCGGAGCACCCCCACCCCTCCCCTGCCGGGCCAGGCCG 1983
                 C  P  R  L  G  A  P  P  P  L  P  C  R  A  R  P  

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
               N  K  N  K  T  K  L  H  Y  E        S  S  A  F  L 
mbg02077  1848 AACAAAAACAAAACAAAATTGCACTATGAA.....GTCTTCTGCCTTCCT 1892
                 |                  | |  || |     | | |  ||    | 
sh03894   1984 GGCGGCGTTGTTGGCGGGGGCCCCGGTGGAGGCCCGGCCTGGGCGGCGCC 2033
               G  G  V  V  G  G  G  P  G  G  G  P  A  W  A  A  P 

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
                S  G  Y  E  R  W  -     G  L  F  W  K  F     C  I
mbg02077  1893 CTCAGGTTATGAGAGATGGTT..GTGGGCTTTTCTGGAAATGTCTCTGTA 1940
               | |     ||| |   | | |  ||| ||| | |||    |   ||||  
sh03894   2034 CGCCATGAATGGGCTGTCGCTGAGTGAGCTCTGCTGCCTCT...TCTGCT 2080
                A  M  N  G  L  S  L  S  E  L  C  C  L  F     C  C

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
                 Y  P  L  A  A  L  H  T  V  A  V  A  L  V  S  L  
mbg02077  1941 TCTATCCATTGGCAGCTCTGCATACAGTGGCAGTGGCTTTGGTGTCACTT 1990
                |   || |   | |  |      | |      | || ||  || | |  
sh03894   2081 GCCCGCCCTGCCCCGGCCGCATCGCTGCCAAGCTCGCCTTCCTGCCGCCG 2130
                 P  P  C  P  G  R  I  A  A  K  L  A  F  L  P  P  

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
               E  H  I  Y      V  L  Q  K  W  S  I  W  V  S  I  G
mbg02077  1991 GAACACATTTTAGGATGTCCTGCAGAAATGGAGCATTTGGGTTTCTATTG 2040
               ||   ||  |    |   ||||  |     |  |     ||   ||  ||
sh03894   2131 GAGGCCACCT....ACTCCCTGGTGCCTGAGCCCGAGCCGGGGCCTGGTG 2176
               E  A  T  Y      S  L  V  P  E  P  E  P  G  P  G  G

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
                 V  R  P  P  P  P  P  P  L              H  F  P  
mbg02077  2041 GAGTCAGGCCCCCCCCCCCCCCCCCCCCCGCCTTCCCATTTCACTTCCCT 2090
               | | | || || |||||       |||            |      | | 
sh03894   2177 GGGCCGGGGCCGCCCCCTTGGGGACCC............TGAGAGCCTCC 2214
                 A  G  A  A  P  L  G  T  L              R  A  S  

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
               S  A  V  C  C  L  S  E  A  G  L     R  L  G  D  * 
mbg02077  2091 TCTGCAGTTTGCTGCCTCTCTGAGGCAGGCCTG.GGAGGTTGGGTGACTG 2139
               || |  |    | | | ||   ||     ||||  |  |   |  |||| 
sh03894   2215 TCGGGCGCACCCGGGCGCTGGAAGCTGCACCTGACGGAGCGTGCCGACTT 2264
               S  G  A  P  G  R  W  K  L  H  L  T  E  R  A  D  F 

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
                T  L  R  L  Q  L  L  E  A  T  A  A  L  T  L  R  E
mbg02077  2140 AACCCTGAGGTTGCAGCTGCTGGAGGCCACAGCTGCCCTGACCCTGCGGG 2189
                      ||   ||    ||||||  |||  |  | | |  ||     | 
sh03894   2265 CCAGTACAGCCAGCGCGAGCTGGACACCATCGAGGTCTTCCCCACCAAGA 2314
                Q  Y  S  Q  R  E  L  D  T  I  E  V  F  P  T  K  S

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                 T  P  P  P  L  A  P  S  T  G  T  N  Y  C  P  S  
mbg02077  2190 AGACCCCCCCACCCCTGGCCCCAAGCACGGGGACAAACTATTGTCCCAGT 2239
                  ||| |     ||  | | |  ||| |        ||     ||  ||
sh03894   2315 GCGCCCGCGGCAACCGCGTCTCCTGCATGTATGTTCGCTGCGTGCCTGGT 2364
                 A  R  G  N  R  V  S  C  M  Y  V  R  C  V  P  G  

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
               Q  W  G  P  V  S  G  M  -     L  S  L  F  P  V  F 
mbg02077  2240 CAGTGGGGCCCTGTGTCTGGCATGCA..TCCTGTCCTTGTTCCCGGTCTT 2287
                   ||  | | ||      |  |||   |    || ||  || || |  
sh03894   2365 GCCAGGTACACGGTCCTCTTCTCGCACGGCAATGCCGTGGACCTGGGCCA 2414
               A  R  Y  T  V  L  F  S  H  G  N  A  V  D  L  G  Q 

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
                V  S  V  S  S  F  G  L   V  S  V  F  Q  G  P  F  
mbg02077  2288 TGTGTCTGTTTCCTCCTTTGGACTCTGTCTCTGTGTTCCAAGGCCCCTTG 2337
                 ||      | || | |||| ||  | |||     ||||  ||  | | 
sh03894   2415 GATGAGCAGCTTCTACATTGGCCT.GGGCTCCCGCCTCCACTGCAACAT. 2462
                M  S  S  F  Y  I  G  L   G  S  R  L  H  C  N  I  

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                 L  S  S  T  S  S  C  V  G  A      S  L  W  I  P 
mbg02077  2338 GCTTATCCTCCACATCCTCCTGCGTGGGAGCCAATGAGCCTTTGGATCCC 2387
                ||| |||| |   | |||| ||   || |||    |||    | |  ||
sh03894   2463 .CTTCTCCTACGACTACTCCGGCTACGGTGCC....AGCTCGGGCAGGCC 2507
                 F  S  Y  D  Y  S  G  Y  G  A      S  S  G  R  P 

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
                L  A  *  N  L  E  L  P  L  L  P  V  L  E  D  N  S
mbg02077  2388 TTTGGCTTAAAACTTGGAGCTGCCTTTGTTACCTGTTCTGGAGGATAACT 2437
               ||  |     ||| |  |        |     | |    | |||      
sh03894   2508 TTCCGAGAGGAACCTCTATGCCGACATCGACGCCGCCTGGCAGGCCCTGC 2557
                S  E  R  N  L  Y  A  D  I  D  A  A  W  Q  A  L  R

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
                 F  K     *                                      
mbg02077  2438 CCTTCAAGGACTGAGGGAGAAACTGGTG............GGGCAGAC.. 2473
                |  || |   |||||| ||  |||| |            ||||| ||  
sh03894   2558 GCACCAGG...TGAGGGCGACCCTGGGGGCAGCTCAGCCTGGGCACACCC 2604
                 T  R     *                                      

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbg02077  2474 .AGAAGGGTCTGGGCATAGGCCTAGGGGTGCTGGAATGGCAGAAGCTGGG 2522
                ||| ||| |  |||   || |  ||||    |        | ||   ||
sh03894   2605 AAGAGGGGACCAGGCGGGGGGCCGGGGGGCGGGCTTCCCTGGGAGGAAGG 2654

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbg02077  2523 GGCCATACATAGAATGAGTTCTGCCACAGAGGCCTGGGAGAGCTAGGGTT 2572
                |         | | |||    ||||||| ||      || || || |  
sh03894   2655 TGGGGGGGCCTGCAGGAGGGGAGCCACAGTGGATGCACAGGGCCAGAGAG 2704

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbg02077  2573 GTGGGCAGGCCA............AGAGGATCAAGATAGACCGTGGATGT 2610
                 || ||||| |            ||  |        | |  |  || ||
sh03894   2705 CCGGACAGGCGAGCTTGGGTGTGCAGGTGCCGCCTCCACATGGCTGAGGT 2754

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbg02077  2611 GGGGACACGCCTTCCT......CCCTGCCTGGCACAGGCTGGCACCTGGT 2654
               | || || ||  ||||      ||||| |  |   || | ||| ||  | 
sh03894   2755 GTGGCCAGGCGGTCCTCCCACACCCTGGCCTGTGGAGCCAGGCTCCCTGG 2804

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbg02077  2655 TCTACCCTAGATTCCTGGAGGGAACCTACATGTTGGTGTCCCCTGCAGGG 2704
                   |||| |  |   |  |||||    |           |   |  | |
sh03894   2805 GAACCCCTGGCCTGAGGATGGGAAGGGGCTGAGCTTGTCACAGGGGTGTG 2854

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbg02077  2705 TATCCCACTGTATGGCATGGAG.........................ACC 2729
                || ||||     || | ||||                         || 
sh03894   2855 GATGCCACCCGGCGGGAGGGAGTGGGTGGTGGTCTGGGGGTCTGTGCACG 2904

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbg02077  2730 TGTGGCTGTGAGGCTCCCG...GGGGCTCGCCTTGGACCGCGATGGGGCC 2776
               |||||||| ||| |   ||   | |||    |||||  |    || ||| 
sh03894   2905 TGTGGCTGGGAGCCCATCGGCCGAGGCAGCACTTGGGGCCAAGTGAGGCG 2954

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbg02077  2777 CGGCTGCGGCCTCC....TAACGGGACTGAGGTGTGCAGCCCGCGAGCTG 2822
                |||||| || |||         ||||||     ||  ||||    ||||
sh03894   2955 AGGCTGCTGCATCCAGGTCCGGAGGACTGGCCCATGAGGCCCTGTGGCTG 3004

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbg02077  2823 CCGCTGCCCG.CATCTCGGAGCA........................... 2844
               | |      | ||||  || |||                           
sh03894   3005 CGGAGCTTGGCCATCCTGGGGCAGGGCCTACAGGGTAAGGTGCAGACCCG 3054

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbg02077  2845 .................................................. 2845
                                                                 
sh03894   3055 CAGCACACATCCGAGGTCTGGGCCAGCCTCGATTCCAGATCCAGCCCTCC 3104

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbg02077  2845 .............CCCCCGCCCCTCCCCTGGCCCGGCGCGGGCCCGGTG. 2880
                            |||| ||||  | | || |  ||| |    |||||| 
sh03894   3105 TAGTCATCCACGTCCCCAGCCCTGCGCTTGCCTGGGCCCTTCACCGGTGT 3154

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbg02077  2881 .....................CCCGCCATGAACGGCCTGTCGGTGAGCGA 2909
                                     | ||  || |||    | |   |   | 
sh03894   3155 TTGAGCACCGCCCGGGCCAGTGCTGCTTTGGACGAGGAGACCCGGGTGGG 3204

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbg02077  2910 GCTCTGCTGCCTGTTCTGCTGCCCACCCTGCCCGGGCCGCATCGCTGCCA 2959
                ||||| || || |||  |||| |||| | | | || |   || |  || 
sh03894   3205 CCTCTGGTGGCTTTTC..CTGCTCACCATCCACTGGGCCTGTCTCGTCCT 3252

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbg02077  2960 AGCTCGCCTTCCTGCCTCCCGATCCCACCTACT..CTCTGGTACCTGAAC 3007
                || |  |  || |||  | | ||  |||| ||  | | || ||| |   
sh03894   3253 GGCCCTGC..CCAGCCCACTGGTCTGACCTGCTCCCGCAGGGACCAGGCA 3300

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbg02077  3008 CTG...............AGCCGGGGCCCGGTGGGGCTGGCGCTGCC... 3039
               | |                |||   |   |||||||  | || ||||   
sh03894   3301 CAGCTCTGAGAAGTCAGAGGCCCTAGGGAGGTGGGGTCGTCGTTGCCTTG 3350

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbg02077  3040 ................CCCTCGGGTCCCCTGCGGACCT....CAGCGGCC 3069
                               ||||   ||   |   ||| ||    |   ||| 
sh03894   3351 GTGATATGCAGGCAGTCCCTGCAGTGGGCCTGGGAGCTGGTCCCCTGGCA 3400

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbg02077  3070 ACACCCGGGCGCTGG................................... 3084
                ||||| ||| ||||                                   
sh03894   3401 CCACCCTGGCTCTGGGGGCCTCCCAGCAGTGTGGGACGCTGACACCAATC 3450

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbg02077  3085 .................................................. 3085
                                                                 
sh03894   3451 ACCACTTCATGCGACTTCCTCGGCCCCTCCTGTCTCTACTGCCTGGGCCA 3500

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbg02077  3085 ......AAGATCCACCTGACGGAGCGTGCT.................... 3108
                      ||   |||||| |   ||  |||                    
sh03894   3501 CTGGCAGAGTCACACCTGCCATGGCCAGCTCTGAGCTCTGTCTGCTCGGC 3550

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbg02077  3109 .........GACTTCCAGTACGGCCAGCGCGAGCTGGATACCATCGAGGT 3149
                          || ||| |  | || ||  || |      |||  |  ||
sh03894   3551 CATCTGTCCTGCTGCCACTTTGTCCTGCAGGAACCTAGGCCCAGAGCTGT 3600

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbg02077  3150 CTTCGTGA.CCAAGAGCGCGCGCGCCAACCGCATCG.........CCTGC 3189
                   | ||  | |||||| || |     |  || ||         |||| 
sh03894   3601 GAGGGGGAGGCCAGAGCGTGCCCAGGGCCTCCACCGGGGATGTGTCCTGT 3650

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbg02077  3190 ATGTATGTGCGCTGTGTACCGGGTGCCA....GGTGAGCTGCCCCCTCCC 3235
                 || || | | ||    || |||| ||    || |  |   ||  |  |
sh03894   3651 TCGTTTGAGTGGTGACATCCAGGTGGCAGCTCGGGGCTCCTGCCTGTAGC 3700

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbg02077  3236 AGGGCTCACAGCAGGGGTGCCTGGGTTCTGTACT.ACCCTGTCTTTCAGC 3284
               |||   ||  || ||| || ||  |  |  |||| ||| || ||  ||| 
sh03894   3701 AGGTGGCAGGGCTGGGCTGGCTCAGCACACTACTGACCATGGCTGCCAGG 3750

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbg02077  3285 CCACCTGACCCCTCTTGTAAAGCACAGGAGACTCCACTTTCATGTTCTTG 3334
                  |  | |          | ||| ||  |   ||||   ||    |  |
sh03894   3751 GAGCAGGCCAGGGAGGCCGAGGCAGAGCTGGAGCCACAGGCACCAGCCAG 3800

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbg02077  3335 CTTTCAAGTCTCCACCAAAGGGTGAG.........GTGGAGAGGTGACAG 3375
                   ||    |      | |||||||         |||||| | || |||
sh03894   3801 GCAGCATCCTTTGGGGCATGGGTGAGTGGCGAGCTGTGGAGTGCTGCCAG 3850

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbg02077  3376 CTTTCCCAGGTTGAGCCTGGAGTCTAAAGGGCAAGCCTTTACTTAGGAGT 3425
                   |   | ||   || ||      | ||| |   |  | ||   |   
sh03894   3851 GAGGCTGGGATT...CCAGGCCAGGGACGGGGACAGCCCTGCTGGTGGAG 3897

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbg02077  3426 CAGGCAGGTGCTTCAGGAAGACACCTGTGCAGG.........GCCAGGCA 3466
                 | ||||       |    |||||||  || |           || |  
sh03894   3898 ATGCCAGGCAGAGGGGACGCACACCTGCCCATGCTCCTGCCTTGCAAGAG 3947

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbg02077  3467 GGTGTATGGCCTTAACCTGACACAGGCCTTTGTCTTATTACAGGTCTGTC 3516
               || || || |    | | ||  |  |    |||   |  | || | ||  
sh03894   3948 GGCGTCTGCCTGGGATCAGAGCCTAGAGCATGTGGGAGGAGAGTTGTG.. 3995

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbg02077  3517 TGGGTTGTCCAGAGGTCAACTGGACAGGATGGGTCTCAAAAGATTTCTGG 3566
                ||||        || ||    | |||| |||||| |    | ||     
sh03894   3996 .GGGTCCCGGCATGGGCAGGGTGGCAGG.TGGGTCCCGTGTGCTTGGGAC 4043

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbg02077  3567 TGGCCAGG.......................................... 3574
               ||| || |                                          
sh03894   4044 TGGGCACGAGGAGGCCTTGTAACTGGTGCTGGATCAGCTGGGTCAGGGGC 4093

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbg02077  3575 .................................................. 3575
                                                                 
sh03894   4094 CGCACACCAATGACCTGGGGGTGAGGGTGCCCCTGGGTGGGAGCTGGTGG 4143

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbg02077  3575 ....GGTGGGGCCTAGTCCTCCTCCTAGCAATAGAGCATCCACTGGAAGG 3620
                   |  | |||| ||  ||  |||   |   || | |    ||||  ||
sh03894   4144 TGCTGAGGTGGCCGAGGACTTGTCCACTCCCAAGGGAAGGTGCTGGTGGG 4193

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbg02077  3621 AGTAGGCTCTTCTT..................ATGCACAGTTCTGTATCA 3652
               ||  ||  |  | |                  ||||  |  |  ||  ||
sh03894   4194 AGGGGGTGCCACCTCCGCAGCCACCACCCTCGATGCTGACCTGGGTTGCA 4243

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbg02077  3653 TGGGGGCATGAGAGGGCTCTTGGCCTCCTGG.......CCTGGGCTTGTG 3695
                 ||    | |  ||||    || ||||  |         | || | | |
sh03894   4244 CTGGCATCTCATTGGGCGTGGGGACTCCGAGAGTCCAAAATTGGGTGGAG 4293

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbg02077  3696 TCTATTGAAGATTGAACTCACAGCGGGTCTCTCTGTAGATGGGGT..CTA 3743
                |  |||  ||   | ||  | |     |||   |   | |||||    |
sh03894   4294 ACATTTGGGGACACAGCTGCCTGAATTCCTCATGGCCAAGGGGGTGGGCA 4343

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbg02077  3744 AGGCCTGCTGG........CTGACCACAGGCAGGCCTAAGGCTATAGGAC 3785
               ||| |||| ||         || || | | |  | | |  ||   |||  
sh03894   4344 AGGGCTGCAGGGAGGAATAGTGTCCGCTGTCCTGGCCAGTGCACCAGG.. 4391

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbg02077  3786 TTAACAGCCTTCAGGTCCCATCCCCA..GCTAGTCCCTGCCATGCTGTGG 3833
                 ||| |  |||    ||   |   |  |   |   |   || | |||||
sh03894   4392 ..AACGGTTTTCTAACCCTGGCAGGAAGGTGTGAAGCATTCAGGATGTGG 4439

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbg02077  3834 GAGGC...CAGCCGTGGAGCTCCAAGTAGAGGAGA.CAGTGGGTGCTGTT 3879
               | | |   |||         | ||  ||| || || |||  || |  |  
sh03894   4440 GGGCCACACAGTTCCCAGTGTGCACCTAGGGGTGACCAGGAGGAGGAGAG 4489

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbg02077  3880 GGCTCAGTG...........................TGGGTGGTCAGCTG 3902
               |   ||| |                           |  || | |||   
sh03894   4490 GCGCCAGGGCCTCCCTTACCCCCGCCCCAGGGGCACTCCGTAGGCAGGAT 4539

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbg02077  3903 TGCTGTGCCCTCTCACCTGCATACCCAGGTACACG............... 3937
                 |||      ||  |  | | || |  ||  |||               
sh03894   4540 CCCTGCAGATCCTAGCTAGGAAACGCCAGTGAACGGCAGCGCAGGGAACG 4589

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbg02077  3938 ..........GTTCTCTTCTCGCATGGCAATGCAGTGGACCTGGGCCAGA 3977
                         | |  |||| | ||  || | |  || |    ||| | | 
sh03894   4590 GGGCGGGGCCGCTGGCTTCGCCCACCGCCACGGTGTTG....GGGGCTGG 4635

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbg02077  3978 TGTGCAGCTTCTATGTTGGCCTGGGCACACGCATCGGCTGCAACATCTTC 4027
                |     | ||     |||  |||    |  |   | |||   ||    |
sh03894   4636 GGGTGGCCCTCGGGACTGGTGTGG....AGCCTGAGCCTGACCCACTGAC 4681

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbg02077  4028 TCTTATGACTACTCTGGCTATGGGATCAGCTCTGG.CCGGCCCTCGGAGA 4076
               |    ||| |     | ||   || ||   || ||  | |  | ||| ||
sh03894   4682 TTGGCTGAGTGGGGAGACTGGAGGGTCGCATCCGGAGCTGGGCCCGGGGA 4731

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbg02077  4077 AGAACCTCTATGCTGACATTGATGCAGCCTGGCAGGCCCTGCGT...... 4120
                |  |     ||   |   ||    ||| | | |||||  |  |      
sh03894   4732 CGCCCGCTGGTGGGAAGGGTGCGCGAGCGTCGGAGGCCGCGGCTGACCCT 4781

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbg02077  4121 ...........ACCAGGTATGGCATCAGCCCAGACAGTATCATCCTGTAT 4159
                           ||||||| ||||||||||| ||||| ||||||||||| 
sh03894   4782 GCTCCGGCGCCGCCAGGTACGGCATCAGCCCGGACAGCATCATCCTGTAC 4831

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbg02077  4160 GGCCAGAGCATTGGCACTGTGCCCACAGTGGATCTGGCGTCACGCTACGA 4209
               || |||||||| ||||| |||||||| ||||| ||||| || ||||||||
sh03894   4832 GGGCAGAGCATCGGCACGGTGCCCACCGTGGACCTGGCCTCGCGCTACGA 4881

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbg02077  4210 GTGTGCTGCAGTGGTTCTGCACTCGCCTCTCACCTCGGGCATGCGGGTGG 4259
               |||||| || ||||| ||||||||||| ||||||||||||||||| || |
sh03894   4882 GTGTGCCGCGGTGGTGCTGCACTCGCCGCTCACCTCGGGCATGCGCGTCG 4931

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbg02077  4260 CCTTCCCTGACACCAAGAAGACCTACTGCTTCGATGCTTTCCCTAACATC 4309
               ||||||| |||||||||||||||||||||||||| || ||||||||||||
sh03894   4932 CCTTCCCCGACACCAAGAAGACCTACTGCTTCGACGCCTTCCCTAACATC 4981

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbg02077  4310 GAGAAGGTGTCGAAGATCACGTCACCGGTGCTCATCATCCACGGCACAGA 4359
               ||||||||||| ||||||||||| || |||||||||||||||||||| ||
sh03894   4982 GAGAAGGTGTCCAAGATCACGTCTCCCGTGCTCATCATCCACGGCACGGA 5031

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbg02077  4360 GGACGAGGTGATCGACTTCTCTCACGGGCTGGCACTGTATGAGCGCTGCC 4409
               ||||||||||||||||||||| ||||||||||| || || ||||||||||
sh03894   5032 GGACGAGGTGATCGACTTCTCGCACGGGCTGGCGCTCTACGAGCGCTGCC 5081

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbg02077  4410 CAAAGGCTGTGGAGCCGCTGTGGGTGGAGGGCGCTGGGCACAATGACATT 4459
               | ||||| |||||||||||||||||||||||||| |||||||| ||||| 
sh03894   5082 CCAAGGCGGTGGAGCCGCTGTGGGTGGAGGGCGCCGGGCACAACGACATC 5131

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
mbg02077  4460 GAGCTGTACAGTCAATACCTGGAGCGCCTACGCCGCTTCATTTCCCAGGA 4509
               ||||| ||||| || |||||||||||||| || |||||||| ||||||||
sh03894   5132 GAGCTCTACAGCCAGTACCTGGAGCGCCTGCGTCGCTTCATCTCCCAGGA 5181

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
mbg02077  4510 GCTGCCCAGCCAACGCGCCTAG.......CCAAGCTGCAGGGACCTCAGC 4552
               |||||||||||| |||||||||       || | | |   ||||||||||
sh03894   5182 GCTGCCCAGCCAGCGCGCCTAGCGGCGGCCCCAACCGGCCGGACCTCAGC 5231

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
mbg02077  4553 AGTACATGGGCCTCCTG.........................CCGGGACT 4577
               | ||    |||| || |                         | ||| ||
sh03894   5232 AATAAGGCGGCCCCCGGACCTCACCCCGCGCCGGCCCCCACCCAGGGGCT 5281

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
mbg02077  4578 GCATGTGACCC......GGAGCCCAGGACCCTGCCTGGCACCCCAGGGGC 4621
               |||||||  ||      |  |||||||   |  |    |  |||||||||
sh03894   5282 GCATGTGGACCCCCCGGGCGGCCCAGGGGACCCCGCCCCGACCCAGGGGC 5331

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
mbg02077  4622 CATGAGCCATGTTCAGGCGTCAGAGGT.CCCTCTTCTCTCCTCATGGAAG 4670
                 ||  | |||| |||||  ||||| | | | || || ||||  ||||||
sh03894   5332 TGTGGACGATGTACAGGCAACAGAGCTACGCACTCCTTTCCTTTTGGAAG 5381

          5501 ----+----*----+----*----+----*----+----*----+ 5545
mbg02077  4671 CAAAGAGAAGGAAAGAGGGAAACTAATTAAAGGATTAAGATTTT. 4714
               |||  ||||   | | |  ||   || | || |||| | | ||| 
sh03894   5382 CAAGAAGAAAATACGTGAAAACGGAAATTAAAGATTTAAAATTTT 5426