# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg01891.fasta.nr -Q ../query/mKIAA0594.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0594, 773 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7913527 sequences Expectation_n fit: rho(ln(x))= 5.8582+/-0.000191; mu= 9.3600+/- 0.011 mean_var=111.2669+/-21.786, 0's: 28 Z-trim: 66 B-trim: 87 in 1/64 Lambda= 0.121588 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81871233|sp|Q8CG46.1|SMC5_MOUSE RecName: Full=S (1101) 4932 876.8 0 gi|23398518|gb|AAH38225.1| Structural maintenance (1101) 4570 813.3 0 gi|14250918|emb|CAC39247.1| SMC5 protein [Homo sap (1101) 4570 813.3 0 gi|122070387|sp|Q8IY18.2|SMC5_HUMAN RecName: Full= (1101) 4570 813.3 0 gi|114625255|ref|XP_520066.2| PREDICTED: SMC5 prot (1204) 4570 813.4 0 gi|194224777|ref|XP_001489272.2| PREDICTED: simila (1119) 4509 802.6 0 gi|13938118|gb|AAH07174.1| Smc5 protein [Mus muscu ( 611) 3841 685.2 2e-194 gi|149062592|gb|EDM13015.1| SMC5 structural mainte (1064) 3617 646.2 2e-182 gi|116283983|gb|AAH17666.1| SMC5 protein [Homo sap ( 941) 3480 622.1 3.2e-175 gi|148709652|gb|EDL41598.1| mCG5312, isoform CRA_a (1086) 3307 591.8 4.8e-166 gi|23468222|gb|AAH38345.1| Structural maintenance (1087) 3301 590.7 9.9e-166 gi|148709653|gb|EDL41599.1| mCG5312, isoform CRA_b (1106) 3301 590.7 1e-165 gi|73946574|ref|XP_533529.2| PREDICTED: similar to (1091) 2976 533.7 1.4e-148 gi|82132695|sp|Q802R9.1|SMC5_FUGRU RecName: Full=S (1092) 2677 481.3 8.9e-133 gi|194385300|dbj|BAG65027.1| unnamed protein produ ( 729) 2256 407.3 1.1e-110 gi|149412853|ref|XP_001505381.1| PREDICTED: simila (1083) 2132 385.7 5.3e-104 gi|109111772|ref|XP_001090492.1| PREDICTED: simila (1156) 2057 372.5 5.1e-100 gi|82132868|sp|Q805A1.1|SMC5_XENLA RecName: Full=S (1065) 2027 367.2 1.8e-98 gi|149062593|gb|EDM13016.1| SMC5 structural mainte (1049) 2004 363.2 3e-97 gi|210091689|gb|EEA39934.1| hypothetical protein B (1061) 1964 356.2 3.9e-95 gi|60098715|emb|CAH65188.1| hypothetical protein [ (1064) 1924 349.2 5e-93 gi|75571298|sp|Q5ZJY5.1|SMC5_CHICK RecName: Full=S (1065) 1924 349.2 5e-93 gi|210116442|gb|EEA64186.1| hypothetical protein B (1096) 1909 346.6 3.2e-92 gi|224088980|ref|XP_002191891.1| PREDICTED: SMC5 p (1050) 1888 342.9 4e-91 gi|113911989|gb|AAI22735.1| SMC5 protein [Bos taur ( 603) 1633 297.9 7.8e-78 gi|148692416|gb|EDL24363.1| mCG1031254 [Mus muscul ( 287) 1621 295.5 2e-77 gi|73946572|ref|XP_859146.1| PREDICTED: similar to ( 247) 1586 289.3 1.3e-75 gi|194034189|ref|XP_001924981.1| PREDICTED: simila ( 288) 1539 281.1 4.2e-73 gi|47228744|emb|CAG07476.1| unnamed protein produc (1034) 1530 280.1 3.1e-72 gi|194034187|ref|XP_001924828.1| PREDICTED: simila ( 466) 1511 276.4 1.8e-71 gi|194669355|ref|XP_585794.4| PREDICTED: structura (1025) 1367 251.5 1.3e-63 gi|118104078|ref|XP_001233557.1| PREDICTED: hypoth ( 245) 1237 228.1 3.3e-57 gi|115527798|gb|AAI24594.1| Zgc:152845 [Danio reri ( 697) 1225 226.4 3e-56 gi|198416844|ref|XP_002121540.1| PREDICTED: simila (1071) 1220 225.7 7.6e-56 gi|182891126|gb|AAI65244.1| Zgc:152845 protein [Da ( 697) 1217 225.0 8e-56 gi|119582905|gb|EAW62501.1| SMC5 structural mainte ( 529) 1186 219.4 2.9e-54 gi|154703038|gb|EDO02777.1| hypothetical protein S (1130) 1074 200.1 4e-48 gi|159105168|gb|EDP44054.1| hypothetical protein M (1065) 968 181.5 1.5e-42 gi|86196520|gb|EAQ71158.1| hypothetical protein MG (1115) 950 178.3 1.4e-41 gi|145017377|gb|EDK01740.1| hypothetical protein M (1134) 950 178.3 1.4e-41 gi|20145494|emb|CAD29584.1| SMC5 protein [Drosophi (1030) 947 177.8 1.9e-41 gi|115954844|ref|XP_001197461.1| PREDICTED: simila (1032) 942 176.9 3.5e-41 gi|115923268|ref|XP_786593.2| PREDICTED: similar t (1069) 942 176.9 3.6e-41 gi|119398407|gb|EAW08837.1| structural maintenance (1185) 941 176.8 4.4e-41 gi|190580997|gb|EDV21076.1| hypothetical protein T ( 951) 903 170.0 3.8e-39 gi|187983105|gb|EDU48593.1| structural maintenance (1128) 896 168.9 1e-38 gi|190580999|gb|EDV21078.1| hypothetical protein T ( 873) 863 163.0 4.6e-37 gi|28925527|gb|EAA34557.1| predicted protein [Neur (1138) 852 161.2 2.1e-36 gi|223543042|gb|EEF44577.1| structural maintenance (1057) 807 153.2 4.8e-34 gi|116000854|emb|CAL50534.1| structural maintenanc (1075) 805 152.9 6.2e-34 >>gi|81871233|sp|Q8CG46.1|SMC5_MOUSE RecName: Full=Struc (1101 aa) initn: 3284 init1: 3284 opt: 4932 Z-score: 4677.9 bits: 876.8 E(): 0 Smith-Waterman score: 4932; 98.969% identity (98.969% similar) in 776 aa overlap (1-773:326-1101) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL :::::::::::::::::::::::::::::: gi|818 VRKLKEGQIPMTRRIEEIDRQRHTLEVRIKEKSTDIKEASQKCKQRQDLIERKDRQIKEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV 780 790 800 810 820 830 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::::: : : :::::::::::::::::::::::::::::::::::::::::::: gi|818 PQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK 840 850 860 870 880 890 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 900 910 920 930 940 950 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 960 970 980 990 1000 1010 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1020 1030 1040 1050 1060 1070 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ :::::::::::::::::::::::::: gi|818 HMLEPNRWNLKAFQRRRRRITFTQPQ 1080 1090 1100 >>gi|23398518|gb|AAH38225.1| Structural maintenance of c (1101 aa) initn: 2989 init1: 2989 opt: 4570 Z-score: 4334.7 bits: 813.3 E(): 0 Smith-Waterman score: 4570; 89.419% identity (97.548% similar) in 775 aa overlap (1-772:326-1100) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::.::.:::::..:.:: gi|233 VRKLKEGQIPITCRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::: ::::::::::.::.::::::::::.::::.:::::::::::..::::::.:.::: gi|233 QQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.::.: :::...::.:::.::::::::::::::::.::::::::::::::: gi|233 LCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::.:::: ::::::::::::::::.::.:::::::::: gi|233 KFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::::. gi|233 NAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEK 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|233 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::..:.:.:::::: :::.:..::: :::::: ::::::::::.:::::::::::: gi|233 EEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::::::::::::::::::::::::::::::::.:.:::::..::::::::::: gi|233 GSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::.:::.:::::.::::::::::::::.:::::::.:.:.. gi|233 TVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTL 780 790 800 810 820 830 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : :: ::.::::::::::::::::::::::::::::::..:.::.: gi|233 PQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTK 840 850 860 870 880 890 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::.:::::::.::::::::::::::::::::::::::::::::::::::: gi|233 REEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 900 910 920 930 940 950 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 960 970 980 990 1000 1010 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1020 1030 1040 1050 1060 1070 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ :::::: :::::::::::::::::: gi|233 HMLEPNTWNLKAFQRRRRRITFTQPS 1080 1090 1100 >>gi|14250918|emb|CAC39247.1| SMC5 protein [Homo sapiens (1101 aa) initn: 2989 init1: 2989 opt: 4570 Z-score: 4334.7 bits: 813.3 E(): 0 Smith-Waterman score: 4570; 89.419% identity (97.548% similar) in 775 aa overlap (1-772:326-1100) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::.::.:::::..:.:: gi|142 VRKLKEGQIPITRRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::: ::::::::::.::.::::::::::.::::.:::::::::::..::::::.:.::: gi|142 QQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.::.: :::...::.:::.::::::::::::::::.::::::::::::::: gi|142 LCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::.:::: ::::::::::::::::.::.:::::::::: gi|142 KFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::::. gi|142 NAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEK 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|142 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::..:.:.:::::: :::.:..::: :::::: ::::::::::.:::::::::::: gi|142 EEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::::::::::::::::::::::::::::::::.:.:::::..::::::::::: gi|142 GSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::.:::.:::::.::::::::::::::.:::::::.:.:.. gi|142 TVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTL 780 790 800 810 820 830 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : :: ::.::::::::::::::::::::::::::::::..:.::.: gi|142 PQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTK 840 850 860 870 880 890 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::.:::::::.::::::::::::::::::::::::::::::::::::::: gi|142 REEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 900 910 920 930 940 950 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 960 970 980 990 1000 1010 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1020 1030 1040 1050 1060 1070 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ :::::: :::::::::::::::::: gi|142 HMLEPNTWNLKAFQRRRRRITFTQPS 1080 1090 1100 >>gi|122070387|sp|Q8IY18.2|SMC5_HUMAN RecName: Full=Stru (1101 aa) initn: 2989 init1: 2989 opt: 4570 Z-score: 4334.7 bits: 813.3 E(): 0 Smith-Waterman score: 4570; 89.419% identity (97.548% similar) in 775 aa overlap (1-772:326-1100) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::.::.:::::..:.:: gi|122 VRKLKEGQIPVTCRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::: ::::::::::.::.::::::::::.::::.:::::::::::..::::::.:.::: gi|122 QQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.::.: :::...::.:::.::::::::::::::::.::::::::::::::: gi|122 LCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::.:::: ::::::::::::::::.::.:::::::::: gi|122 KFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::::. gi|122 NAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEK 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|122 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::..:.:.:::::: :::.:..::: :::::: ::::::::::.:::::::::::: gi|122 EEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::::::::::::::::::::::::::::::::.:.:::::..::::::::::: gi|122 GSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::.:::.:::::.::::::::::::::.:::::::.:.:.. gi|122 TVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTL 780 790 800 810 820 830 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : :: ::.::::::::::::::::::::::::::::::..:.::.: gi|122 PQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTK 840 850 860 870 880 890 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::.:::::::.::::::::::::::::::::::::::::::::::::::: gi|122 REEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 900 910 920 930 940 950 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 960 970 980 990 1000 1010 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1020 1030 1040 1050 1060 1070 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ :::::: :::::::::::::::::: gi|122 HMLEPNTWNLKAFQRRRRRITFTQPS 1080 1090 1100 >>gi|114625255|ref|XP_520066.2| PREDICTED: SMC5 protein (1204 aa) initn: 2981 init1: 2981 opt: 4570 Z-score: 4334.2 bits: 813.4 E(): 0 Smith-Waterman score: 4570; 89.290% identity (97.677% similar) in 775 aa overlap (1-772:429-1203) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::.::.:::::..:.:: gi|114 VRKLKEGQIPITRRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEEL 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::: ::::::::::.::.::::::::::.::::.:::::::::::..::::::.:.::: gi|114 QQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKA 460 470 480 490 500 510 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.::.: :::...::.:::.::::::::::::::::.::::::::::::::: gi|114 LCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRD 520 530 540 550 560 570 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::.:::: ::::::::::::::::.::.:::::::::: gi|114 KFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRV 580 590 600 610 620 630 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::::. gi|114 NAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEK 640 650 660 670 680 690 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|114 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 700 710 720 730 740 750 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::..:.:..::::: :::.:..::: :::::: ::::::::::.:::::::::::: gi|114 EEQLKEIHRKLQTVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 760 770 780 790 800 810 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::.:::::::::::::::::::::::::::::.:.:::::..::::::::::: gi|114 GSLKLMEQDSCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNT 820 830 840 850 860 870 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::.:::.:::::.::::::::::::::.:::::::.:.:.. gi|114 TVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTL 880 890 900 910 920 930 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : :: ::.::::::::::::::::::::::::::::::..:.::.: gi|114 PQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTK 940 950 960 970 980 990 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::.:::::::.::::::::::::::::::::::::::::::::::::::: gi|114 REEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 1000 1010 1020 1030 1040 1050 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 1060 1070 1080 1090 1100 1110 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1120 1130 1140 1150 1160 1170 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ ::::::::::::::::::::::::: gi|114 HMLEPNRWNLKAFQRRRRRITFTQPS 1180 1190 1200 >>gi|194224777|ref|XP_001489272.2| PREDICTED: similar to (1119 aa) initn: 2914 init1: 2914 opt: 4509 Z-score: 4276.8 bits: 802.6 E(): 0 Smith-Waterman score: 4509; 88.645% identity (96.903% similar) in 775 aa overlap (1-772:343-1117) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.:::::.:::::::::.:::::..:.:: gi|194 VRKLKEGQIPMTLRIEEIEKQRHNLEARIKEKATDIKETSQKCKQRQDVIERKDKHIEEL 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::::::.::: :::.:::::::::::::.::::.:::::::::::..::::::::.::: gi|194 QQALTVKRNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRVQDEKA 380 390 400 410 420 430 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.:::: :::....: .::.:::::::::::::::::::::::::::::::. gi|194 LCEGEIIDKRREKETLEKEKKNVEEHIVRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRN 440 450 460 470 480 490 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::::::: :::::::::::::::.::::::::::::: gi|194 KFKQRVCEPIMLTINMKDNKNAKYVENHIPLNDLRAFVFESQEDMEVFLREVRDNKKLRV 500 510 520 530 540 550 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER :::.::..:.::.:::::::.:: :::::::::::::::::::::::::::::::::::: gi|194 NAVVAPRVSHADRAPSRSLNELKPYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER 560 570 580 590 600 610 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: ::::::: :::::::::::::::::::::: gi|194 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISINTSLKVAQFLTVTVDLEQRRHL 620 630 640 650 660 670 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::.:..:.::.: : ::..::..:: :::::: ::::::::::.:::::::::::: gi|194 EEQLKEINKKLQAVESDLIALHETNKRLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 680 690 700 710 720 730 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::::::::::::::.:::::.::::::::::: :.: :::..:.::::::::: gi|194 GSLKLMEQDTCNLEEEERKASAKIKEIHVQKAKLVTELTDLIKSCTSLHIKKVDLILQNT 740 750 760 770 780 790 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::::::.:::::.::::::::::::::.:::::::.:.:.: gi|194 TVISEKNKLESDYMAASSQLRVTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTV 800 810 820 830 840 850 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : ::::::::::::::::::::::::::::::::::::.:::::.: gi|194 PQEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYTK 860 870 880 890 900 910 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::. ::::::.:::.::::::::::::::::::::::::::::::::::: gi|194 REEEIEQLTEELKIKKVELDQYRESISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 920 930 940 950 960 970 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 980 990 1000 1010 1020 1030 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 1040 1050 1060 1070 1080 1090 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ ::::::::::::::::::::::::: gi|194 HMLEPNRWNLKAFQRRRRRITFTQPSQ 1100 1110 >>gi|13938118|gb|AAH07174.1| Smc5 protein [Mus musculus] (611 aa) initn: 2193 init1: 2193 opt: 3841 Z-score: 3646.8 bits: 685.2 E(): 2e-194 Smith-Waterman score: 3841; 98.363% identity (98.527% similar) in 611 aa overlap (166-773:1-611) 140 150 160 170 180 190 mKIAA0 RDTYDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDM :::::::::::::::::::::::::::::: gi|139 MKDNKNAKYVENHISSNDLRAFVFESQEDM 10 20 30 200 210 220 230 240 250 mKIAA0 EIFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYL :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|139 EIFLREVRDNKKLRVNAVIAPKISCADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYL 40 50 60 70 80 90 260 270 280 290 300 310 mKIAA0 CCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 CCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVA 100 110 120 130 140 150 320 330 340 350 360 370 mKIAA0 QFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLER ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|139 QFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLATLRDTNRHLELKDNELRLKKKELLER 160 170 180 190 200 210 380 390 400 410 420 430 mKIAA0 KTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 KTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKIC 220 230 240 250 260 270 440 450 460 470 480 490 mKIAA0 TSFQIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 TSFQIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELM 280 290 300 310 320 330 500 510 520 530 540 550 mKIAA0 KKARQVCNLSADQAVPQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRAS ::::::::::::::::::::: : : ::::::::::::::::::::::::::::: gi|139 KKARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDALLTEERSRAS 340 350 360 370 380 390 560 570 580 590 600 610 mKIAA0 CFTGLNPSVVEEYSKREVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 CFTGLNPSVVEEYSKREVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKIN 400 410 420 430 440 450 620 630 640 650 660 670 mKIAA0 EKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 EKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVST 460 470 480 490 500 510 680 690 700 710 720 730 mKIAA0 MLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|139 MLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNL 520 530 540 550 560 570 740 750 760 770 mKIAA0 PYSEKMTVLFVYNGPHMLEPNRWNLKAFQRRRRRITFTQPQ ::::::::::::::::::::::::::::::::::::::::: gi|139 PYSEKMTVLFVYNGPHMLEPNRWNLKAFQRRRRRITFTQPQ 580 590 600 610 >>gi|149062592|gb|EDM13015.1| SMC5 structural maintenanc (1064 aa) initn: 2694 init1: 1932 opt: 3617 Z-score: 3431.4 bits: 646.2 E(): 2e-182 Smith-Waterman score: 4505; 91.484% identity (93.806% similar) in 775 aa overlap (1-772:326-1062) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::::::::::::.:::: gi|149 VRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLIERKDRHIKEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA ::::::::::: :::::::::::::::::.::.:::::::::::::..:::::::::::: gi|149 QQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITNDLRRVQEEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 LCEGEIIDKQREKEMLEKQKRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV ::::::::::::: ::::::::: gi|149 RFKQRVCEPIMLT--------------------------------------VRDNKKLRV 480 490 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 NAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER 500 510 520 530 540 550 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|149 TRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 560 570 580 590 600 610 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::.::.::::::::.::::::::::::::::::::::::::::.:::::::::::: gi|149 EEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLERKTKKRQLEQKISSKL 620 630 640 650 660 670 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT :::::::::::::::::::::::::::::::::::::::::::::::..::::::::::: gi|149 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSLHIQKVDLILQNT 680 690 700 710 720 730 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKRARQVCNLSADQAV 740 750 760 770 780 790 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::::: : : ::::::::::::::::::::::::::::::::::::::::::.: gi|149 PQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYTK 800 810 820 830 840 850 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE ::.:::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|149 REIEIQQLTEELKGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE 860 870 880 890 900 910 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF 920 930 940 950 960 970 690 700 710 720 730 740 mKIAA0 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGP 980 990 1000 1010 1020 1030 750 760 770 mKIAA0 HMLEPNRWNLKAFQRRRRRITFTQPQ ::::::::::::::::::::::::: gi|149 HMLEPNRWNLKAFQRRRRRITFTQPSQ 1040 1050 1060 >>gi|116283983|gb|AAH17666.1| SMC5 protein [Homo sapiens (941 aa) initn: 3487 init1: 2987 opt: 3480 Z-score: 3302.2 bits: 622.1 E(): 3.2e-175 Smith-Waterman score: 3480; 86.786% identity (97.064% similar) in 613 aa overlap (1-610:326-938) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL ::.::::::::::::.::.:::::..:.:: gi|116 VRKLKEGQIPITRRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::: ::::::::::.::.::::::::::.::::.:::::::::::..::::::.:.::: gi|116 QQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::.::.: :::...::.:::.::::::::::::::::.::::::::::::::: gi|116 LCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV .:::::::::::::::::::::::.:::: ::::::::::::::::.::.:::::::::: gi|116 KFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER ::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::::. gi|116 NAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEK 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::: gi|116 TRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL ::::::..:.:.:::::: :::.:..::: :::::: ::::::::::.:::::::::::: gi|116 EEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT .:..:::::::::::::::::::::::::::::::::::.:.:::::..::::::::::: gi|116 GSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV ::::::::::.::::.:::::.:::.:::::.::::::::::::::.:::::::.:.:.. gi|116 TVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTL 780 790 800 810 820 830 520 530 540 550 560 mKIAA0 PQEFQTVSIKISN---SSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSK :::.:: : : :: ::.::::::::::::::::::::::::::::::..:.::.: gi|116 PQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTK 840 850 860 870 880 890 570 580 590 600 610 620 mKIAA0 REVEIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGE :: ::.::::::.:::::::.:::::::::::::::::::::: gi|116 REEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKKKK 900 910 920 930 940 630 640 650 660 670 680 mKIAA0 VDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPF >>gi|148709652|gb|EDL41598.1| mCG5312, isoform CRA_a [Mu (1086 aa) initn: 4895 init1: 3282 opt: 3307 Z-score: 3137.4 bits: 591.8 E(): 4.8e-166 Smith-Waterman score: 4875; 98.448% identity (98.448% similar) in 773 aa overlap (1-773:326-1086) 10 20 30 mKIAA0 EKSTDIKEASQKCKQRQDLIERKDRQIKEL :::::::::::::::::::::::::::::: gi|148 VRKLKEGQIPMTRRIEEIDRQRHTLEVRIKEKSTDIKEASQKCKQRQDLIERKDRQIKEL 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKA 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRD 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRV 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA0 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTER 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA0 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHL 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA0 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKL 660 670 680 690 700 710 400 410 420 430 440 450 mKIAA0 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNT 720 730 740 750 760 770 460 470 480 490 500 510 mKIAA0 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAV 780 790 800 810 820 830 520 530 540 550 560 570 mKIAA0 PQEFQTVSIKISNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSKREV :::::: :::::::::::::::::::::::::::::::::::::::::: gi|148 PQEFQT------------AFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSKREV 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIQQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDL 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 HTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVV 950 960 970 980 990 1000 700 710 720 730 740 750 mKIAA0 DEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHML 1010 1020 1030 1040 1050 1060 760 770 mKIAA0 EPNRWNLKAFQRRRRRITFTQPQ ::::::::::::::::::::::: gi|148 EPNRWNLKAFQRRRRRITFTQPQ 1070 1080 773 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 09:25:59 2009 done: Sun Mar 15 09:34:08 2009 Total Scan time: 1075.550 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]