# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg01759.fasta.nr -Q ../query/mKIAA0029.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0029, 453 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7912536 sequences Expectation_n fit: rho(ln(x))= 6.0045+/-0.000195; mu= 8.0411+/- 0.011 mean_var=102.8970+/-19.789, 0's: 32 Z-trim: 55 B-trim: 11 in 1/67 Lambda= 0.126437 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|223460234|gb|AAI37773.1| R3hdm1 protein [Mus mu (1101) 2900 539.6 1.4e-150 gi|148707809|gb|EDL39756.1| R3H domain 1 (binds si (1135) 2900 539.6 1.5e-150 gi|50845430|ref|NP_861415.2| R3H domain (binds sin (1135) 2900 539.6 1.5e-150 gi|148707808|gb|EDL39755.1| R3H domain 1 (binds si (1057) 2887 537.2 7.2e-150 gi|109498566|ref|XP_001055206.1| PREDICTED: simila (1089) 2771 516.1 1.7e-143 gi|109497817|ref|XP_001054959.1| PREDICTED: simila (1099) 2771 516.1 1.7e-143 gi|198442903|ref|NP_001128339.1| R3H domain contai (1133) 2771 516.1 1.8e-143 gi|194222190|ref|XP_001915490.1| PREDICTED: R3H do (1099) 2657 495.3 3.2e-137 gi|73984247|ref|XP_856389.1| PREDICTED: similar to ( 974) 2651 494.1 6.2e-137 gi|73984249|ref|XP_856432.1| PREDICTED: similar to (1000) 2651 494.2 6.3e-137 gi|73984251|ref|XP_856477.1| PREDICTED: similar to (1047) 2651 494.2 6.5e-137 gi|73984255|ref|XP_856562.1| PREDICTED: similar to (1087) 2651 494.2 6.7e-137 gi|73984257|ref|XP_856599.1| PREDICTED: similar to (1103) 2651 494.2 6.8e-137 gi|73984253|ref|XP_848592.1| PREDICTED: similar to (1136) 2651 494.2 6.9e-137 gi|194384756|dbj|BAG59538.1| unnamed protein produ ( 821) 2592 483.3 9.4e-134 gi|114581032|ref|XP_001153475.1| PREDICTED: R3H do ( 849) 2592 483.3 9.7e-134 gi|114581030|ref|XP_001153724.1| PREDICTED: R3H do ( 882) 2592 483.4 9.9e-134 gi|194664704|ref|XP_613390.4| PREDICTED: similar t (1100) 2593 483.6 1e-133 gi|114581012|ref|XP_001153781.1| PREDICTED: R3H do ( 961) 2592 483.4 1.1e-133 gi|114581022|ref|XP_001154157.1| PREDICTED: R3H do ( 971) 2592 483.4 1.1e-133 gi|119632032|gb|EAX11627.1| R3H domain containing ( 971) 2592 483.4 1.1e-133 gi|168278487|dbj|BAG11123.1| R3H domain-containing ( 971) 2592 483.4 1.1e-133 gi|114581028|ref|XP_001153837.1| PREDICTED: R3H do ( 988) 2592 483.4 1.1e-133 gi|114581020|ref|XP_001154087.1| PREDICTED: R3H do (1001) 2592 483.4 1.1e-133 gi|114581026|ref|XP_001153900.1| PREDICTED: R3H do (1002) 2592 483.4 1.1e-133 gi|114581016|ref|XP_001153961.1| PREDICTED: R3H do (1015) 2592 483.4 1.1e-133 gi|114581024|ref|XP_001154024.1| PREDICTED: R3H do (1021) 2592 483.4 1.1e-133 gi|193785418|dbj|BAG54571.1| unnamed protein produ (1044) 2592 483.4 1.1e-133 gi|114581010|ref|XP_001153284.1| PREDICTED: R3H do (1046) 2592 483.4 1.1e-133 gi|92086999|sp|Q15032.3|R3HD1_HUMAN RecName: Full= (1099) 2592 483.4 1.2e-133 gi|114581014|ref|XP_515807.2| PREDICTED: R3H domai (1100) 2592 483.4 1.2e-133 gi|158261053|dbj|BAF82704.1| unnamed protein produ (1100) 2581 481.4 4.7e-133 gi|55731079|emb|CAH92255.1| hypothetical protein [ (1061) 2580 481.2 5.2e-133 gi|161728823|dbj|BAF94229.1| R3hdm1 [Rattus norveg ( 597) 2407 449.5 1.1e-123 gi|126326128|ref|XP_001363878.1| PREDICTED: simila (1092) 2321 434.0 8.9e-119 gi|126326126|ref|XP_001363790.1| PREDICTED: simila (1123) 2311 432.2 3.2e-118 gi|149637044|ref|XP_001509425.1| PREDICTED: simila (1095) 2308 431.6 4.6e-118 gi|149637042|ref|XP_001509390.1| PREDICTED: simila (1128) 2308 431.6 4.7e-118 gi|118093853|ref|XP_422137.2| PREDICTED: similar t (1090) 2161 404.8 5.4e-110 gi|224056088|ref|XP_002194125.1| PREDICTED: R3H do (1072) 1967 369.4 2.4e-99 gi|62630177|gb|AAX88922.1| unknown [Homo sapiens] ( 314) 1959 367.5 2.6e-99 gi|55730193|emb|CAH91820.1| hypothetical protein [ ( 823) 1407 267.2 1.1e-68 gi|13874458|dbj|BAB46859.1| hypothetical protein [ ( 445) 1395 264.8 3.2e-68 gi|133777338|gb|AAI04996.2| R3H domain containing ( 637) 1396 265.1 3.7e-68 gi|219520596|gb|AAI43606.1| R3HDM2 protein [Homo s ( 671) 1396 265.1 3.8e-68 gi|73909086|gb|AAH41857.1| R3HDM2 protein [Homo sa ( 681) 1396 265.1 3.8e-68 gi|119617414|gb|EAW97008.1| R3H domain containing ( 713) 1396 265.1 4e-68 gi|168273138|dbj|BAG10408.1| R3H domain-containing ( 840) 1396 265.2 4.5e-68 gi|109097378|ref|XP_001100250.1| PREDICTED: hypoth ( 925) 1396 265.2 4.9e-68 gi|148887413|sp|Q9Y2K5.3|R3HD2_HUMAN RecName: Full ( 976) 1396 265.2 5.1e-68 >>gi|223460234|gb|AAI37773.1| R3hdm1 protein [Mus muscul (1101 aa) initn: 2900 init1: 2900 opt: 2900 Z-score: 2859.5 bits: 539.6 E(): 1.4e-150 Smith-Waterman score: 2900; 100.000% identity (100.000% similar) in 419 aa overlap (35-453:683-1101) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|223 HSSQPQYRPIPSVHHSSHLNQPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 660 670 680 690 700 710 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY 720 730 740 750 760 770 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM 780 790 800 810 820 830 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS 840 850 860 870 880 890 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ 900 910 920 930 940 950 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG 960 970 980 990 1000 1010 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK 1020 1030 1040 1050 1060 1070 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|223 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1080 1090 1100 >>gi|148707809|gb|EDL39756.1| R3H domain 1 (binds single (1135 aa) initn: 2900 init1: 2900 opt: 2900 Z-score: 2859.3 bits: 539.6 E(): 1.5e-150 Smith-Waterman score: 2900; 100.000% identity (100.000% similar) in 419 aa overlap (35-453:717-1135) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|148 HSSQPQYRPIPSVHHSSHLNHPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 690 700 710 720 730 740 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY 750 760 770 780 790 800 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM 810 820 830 840 850 860 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS 870 880 890 900 910 920 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ 930 940 950 960 970 980 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG 990 1000 1010 1020 1030 1040 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK 1050 1060 1070 1080 1090 1100 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|148 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1110 1120 1130 >>gi|50845430|ref|NP_861415.2| R3H domain (binds single- (1135 aa) initn: 2900 init1: 2900 opt: 2900 Z-score: 2859.3 bits: 539.6 E(): 1.5e-150 Smith-Waterman score: 2900; 100.000% identity (100.000% similar) in 419 aa overlap (35-453:717-1135) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|508 HSSQPQYRPIPSVHHSSHLNQPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 690 700 710 720 730 740 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY 750 760 770 780 790 800 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM 810 820 830 840 850 860 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS 870 880 890 900 910 920 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ 930 940 950 960 970 980 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG 990 1000 1010 1020 1030 1040 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK 1050 1060 1070 1080 1090 1100 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|508 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1110 1120 1130 >>gi|148707808|gb|EDL39755.1| R3H domain 1 (binds single (1057 aa) initn: 2887 init1: 2887 opt: 2887 Z-score: 2846.9 bits: 537.2 E(): 7.2e-150 Smith-Waterman score: 2887; 99.761% identity (99.761% similar) in 419 aa overlap (35-453:639-1057) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|148 HSSQPQYRPIPSVHHSSHLNHPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 610 620 630 640 650 660 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY 670 680 690 700 710 720 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM 730 740 750 760 770 780 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|148 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQVSPQLSSPILSPVQS 790 800 810 820 830 840 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ 850 860 870 880 890 900 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG 910 920 930 940 950 960 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK 970 980 990 1000 1010 1020 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|148 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1030 1040 1050 >>gi|109498566|ref|XP_001055206.1| PREDICTED: similar to (1089 aa) initn: 2771 init1: 2771 opt: 2771 Z-score: 2732.4 bits: 516.1 E(): 1.7e-143 Smith-Waterman score: 2771; 95.465% identity (98.568% similar) in 419 aa overlap (35-453:671-1089) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|109 HSSQPQYRPIPSVHHSSHLNQPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 650 660 670 680 690 700 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTAGMPVY 710 720 730 740 750 760 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|109 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAALPQQPPGGGMVM 770 780 790 800 810 820 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::: ::.::::::::::..::::::::::. :.::.::: :::::::::::::: gi|109 MQLNLPNNAPSRAHSPPQWKQNKYHCDHQRGQKCMEVSHMDSIVQHSPQLSSPILSPVQS 830 840 850 860 870 880 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::.::: :::::::::.:::::::::::::::::::::::::.:::::::::::: gi|109 PAPAQLSALKTTRPSGPPLSIVSQFARPFVPGQGDARYPLLGQPLQYSPPTLLHGHIPHQ 890 900 910 920 930 940 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRMEAEKLFGELFKIG 950 960 970 980 990 1000 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::: :::::::::::::.::::::::::::::::::::::::::: gi|109 AKIRWLRDPQSQPQLRRHPLCCGSGDNTVNPERSKPSDLASTYTVLATFPSISAAQSALK 1010 1020 1030 1040 1050 1060 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|109 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1070 1080 >>gi|109497817|ref|XP_001054959.1| PREDICTED: similar to (1099 aa) initn: 2771 init1: 2771 opt: 2771 Z-score: 2732.3 bits: 516.1 E(): 1.7e-143 Smith-Waterman score: 2771; 95.465% identity (98.568% similar) in 419 aa overlap (35-453:681-1099) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|109 HSSQPQYRPIPSVHHSSHLNQPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 660 670 680 690 700 710 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTAGMPVY 720 730 740 750 760 770 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|109 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAALPQQPPGGGMVM 780 790 800 810 820 830 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::: ::.::::::::::..::::::::::. :.::.::: :::::::::::::: gi|109 MQLNLPNNAPSRAHSPPQWKQNKYHCDHQRGQKCMEVSHMDSIVQHSPQLSSPILSPVQS 840 850 860 870 880 890 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::.::: :::::::::.:::::::::::::::::::::::::.:::::::::::: gi|109 PAPAQLSALKTTRPSGPPLSIVSQFARPFVPGQGDARYPLLGQPLQYSPPTLLHGHIPHQ 900 910 920 930 940 950 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRMEAEKLFGELFKIG 960 970 980 990 1000 1010 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::: :::::::::::::.::::::::::::::::::::::::::: gi|109 AKIRWLRDPQSQPQLRRHPLCCGSGDNTVNPERSKPSDLASTYTVLATFPSISAAQSALK 1020 1030 1040 1050 1060 1070 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|109 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1080 1090 >>gi|198442903|ref|NP_001128339.1| R3H domain containing (1133 aa) initn: 2771 init1: 2771 opt: 2771 Z-score: 2732.2 bits: 516.1 E(): 1.8e-143 Smith-Waterman score: 2771; 95.465% identity (98.568% similar) in 419 aa overlap (35-453:715-1133) 10 20 30 40 50 60 mKIAA0 FDHIEFNLKYRSILLFTINTKQGLTHFAIAGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ :::::::::::::::::::::::::::::: gi|198 HSSQPQYRPIPSVHHSSHLNQPLPQPAQHTGYQVMPNQQQNYQGIVGVQSPQSQSLMGGQ 690 700 710 720 730 740 70 80 90 100 110 120 mKIAA0 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTTGMPVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|198 PNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQTYQQPVVFPNQSNQGSLPTAGMPVY 750 760 770 780 790 800 130 140 150 160 170 180 mKIAA0 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAAVPQQPPGGGMVM ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|198 YSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCAALPQQPPGGGMVM 810 820 830 840 850 860 190 200 210 220 230 240 mKIAA0 MQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCMDFSNMDNIVQPSPQLSSPILSPVQS :::::::: ::.::::::::::..::::::::::. :.::.::: :::::::::::::: gi|198 MQLNLPNNAPSRAHSPPQWKQNKYHCDHQRGQKCMEVSHMDSIVQHSPQLSSPILSPVQS 870 880 890 900 910 920 250 260 270 280 290 300 mKIAA0 PAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGDARYPLLGQPLQYNPPTLLHGHIPHQ :::::::.::: :::::::::.:::::::::::::::::::::::::.:::::::::::: gi|198 PAPAQLSALKTTRPSGPPLSIVSQFARPFVPGQGDARYPLLGQPLQYSPPTLLHGHIPHQ 930 940 950 960 970 980 310 320 330 340 350 360 mKIAA0 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRVEAEKLFGELFKIG ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|198 QGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVLEITELPDGITRMEAEKLFGELFKIG 990 1000 1010 1020 1030 1040 370 380 390 400 410 420 mKIAA0 AKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSKPSDLASTYTVLATFPSISAAQSALK :::::::::::::::::: :::::::::::::.::::::::::::::::::::::::::: gi|198 AKIRWLRDPQSQPQLRRHPLCCGSGDNTVNPERSKPSDLASTYTVLATFPSISAAQSALK 1050 1060 1070 1080 1090 1100 430 440 450 mKIAA0 KQIHSVNKFKLRMSKKHYDFHILERASSQ ::::::::::::::::::::::::::::: gi|198 KQIHSVNKFKLRMSKKHYDFHILERASSQ 1110 1120 1130 >>gi|194222190|ref|XP_001915490.1| PREDICTED: R3H domain (1099 aa) initn: 2656 init1: 2656 opt: 2657 Z-score: 2620.0 bits: 495.3 E(): 3.2e-137 Smith-Waterman score: 2657; 86.036% identity (95.495% similar) in 444 aa overlap (13-453:656-1099) 10 20 30 mKIAA0 NSDIFDHIEFNLKYRSI--LLFTINTKQGLTHFAI-AGYQVM .:: . . .. . .:.: . : .::::: gi|194 VLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPLPSVHYNSHLNQALPQPAQQTGYQVM 630 640 650 660 670 680 40 50 60 70 80 90 mKIAA0 PNQQQNYQGIVGVQSPQSQSLMGGQPNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQ ::::::::::.:::.::::::.:::::: : .:::::::::::::::::::::::::::: gi|194 PNQQQNYQGIIGVQQPQSQSLVGGQPNSIGNQIQGVVIPYPSVPSYQVSLPQGSQGIAHQ 690 700 710 720 730 740 100 110 120 130 140 150 mKIAA0 TYQQPVVFPNQSNQGSLPTTGMPVYYSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSP ::::::.:::::::::.:::::::::::::::::.::::.:::::::::.:::::::::: gi|194 TYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSDQVQFPRTTSP 750 760 770 780 790 800 160 170 180 190 200 210 mKIAA0 CSSQQLQGHQCAAVPQQPPGGGMVMMQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCM :.:::::.::::::: :::::::::::..:::::::.::::::::::.::::::::::. gi|194 CNSQQLQSHQCAAVPPLPPGGGMVMMQLSVPNNPQSRAHSPPQWKQNKYYCDHQRGQKCV 810 820 830 840 850 860 220 230 240 250 260 270 mKIAA0 DFSNMDNIVQPSPQLSSPILSPVQSPAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGD .:::.:::.: ::::::::.::.:::::::::::::.:::::::::. ::.::::::::: gi|194 EFSNVDNIIQHSPQLSSPIVSPAQSPAPAQLSTLKTVRPSGPPLSIIPQFSRPFVPGQGD 870 880 890 900 910 920 280 290 300 310 320 330 mKIAA0 ARYPLLGQPLQYNPPTLLHGHIPHQQGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVL :::::::::::::::..:::::: ::::::::::::::.::::::::::::::::::::: gi|194 ARYPLLGQPLQYNPPAVLHGHIPTQQGQSGSRHGNRGRKQAKKAASTDLGAGEAVVGKVL 930 940 950 960 970 980 340 350 360 370 380 390 mKIAA0 EITELPDGITRVEAEKLFGELFKIGAKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSK :::::::::::.:::::::::::::::::::::::::: :::: ::::::::.::::.:: gi|194 EITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPPLRRHPLCCGSGDNAVNPERSK 990 1000 1010 1020 1030 1040 400 410 420 430 440 450 mKIAA0 PSDLASTYTVLATFPSISAAQSALKKQIHSVNKFKLRMSKKHYDFHILERASSQ :::::::::::::::::::::.::::::.:::::::: :::::::::::::::: gi|194 PSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ 1050 1060 1070 1080 1090 >>gi|73984247|ref|XP_856389.1| PREDICTED: similar to R3H (974 aa) initn: 2649 init1: 2649 opt: 2651 Z-score: 2614.8 bits: 494.1 E(): 6.2e-137 Smith-Waterman score: 2651; 86.036% identity (95.495% similar) in 444 aa overlap (13-453:531-974) 10 20 30 mKIAA0 NSDIFDHIEFNLKYRSI--LLFTINTKQGLTHFAI-AGYQVM .:: : . .. . .: : . : .::::. gi|739 VLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPIPSVHYNSHLNQPLPQPAQQTGYQVI 510 520 530 540 550 560 40 50 60 70 80 90 mKIAA0 PNQQQNYQGIVGVQSPQSQSLMGGQPNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQ ::.::::::.::::.::::::.:::::: : .::::::::::::::::::::.::::::: gi|739 PNHQQNYQGLVGVQQPQSQSLVGGQPNSIGNQIQGVVIPYPSVPSYQVSLPQSSQGIAHQ 570 580 590 600 610 620 100 110 120 130 140 150 mKIAA0 TYQQPVVFPNQSNQGSLPTTGMPVYYSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSP ::::::.:::::::::.:::::::::::::::::.::::.:::::::::::::::::::: gi|739 TYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSP 630 640 650 660 670 680 160 170 180 190 200 210 mKIAA0 CSSQQLQGHQCAAVPQQPPGGGMVMMQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCM :.:::::.::::::: ::::::::::::.:::::::.::::::::::.::::::::::. gi|739 CNSQQLQSHQCAAVPPPPPGGGMVMMQLNVPNNPQSRAHSPPQWKQNKYYCDHQRGQKCV 690 700 710 720 730 740 220 230 240 250 260 270 mKIAA0 DFSNMDNIVQPSPQLSSPILSPVQSPAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGD .:::.::::: ::::::::.::.::::::::.::::.:::::::::. ::.::::::::: gi|739 EFSNVDNIVQHSPQLSSPIISPAQSPAPAQLTTLKTVRPSGPPLSIIPQFSRPFVPGQGD 750 760 770 780 790 800 280 290 300 310 320 330 mKIAA0 ARYPLLGQPLQYNPPTLLHGHIPHQQGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVL :::::::::::::::..:::::: ::::::.:::::::.::::::::::::::::::::: gi|739 ARYPLLGQPLQYNPPAVLHGHIPTQQGQSGNRHGNRGRKQAKKAASTDLGAGEAVVGKVL 810 820 830 840 850 860 340 350 360 370 380 390 mKIAA0 EITELPDGITRVEAEKLFGELFKIGAKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSK :::::::::::.::::::::::::::::::::::::::::::: ::::::::.::::.:: gi|739 EITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPQLRRHPLCCGSGDNAVNPERSK 870 880 890 900 910 920 400 410 420 430 440 450 mKIAA0 PSDLASTYTVLATFPSISAAQSALKKQIHSVNKFKLRMSKKHYDFHILERASSQ :::::::::::::::::::::.::::::.:::::::: :::::::::::::::: gi|739 PSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ 930 940 950 960 970 >>gi|73984249|ref|XP_856432.1| PREDICTED: similar to R3H (1000 aa) initn: 2649 init1: 2649 opt: 2651 Z-score: 2614.6 bits: 494.2 E(): 6.3e-137 Smith-Waterman score: 2651; 86.036% identity (95.495% similar) in 444 aa overlap (13-453:557-1000) 10 20 30 mKIAA0 NSDIFDHIEFNLKYRSI--LLFTINTKQGLTHFAI-AGYQVM .:: : . .. . .: : . : .::::. gi|739 VLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPIPSVHYNSHLNQPLPQPAQQTGYQVI 530 540 550 560 570 580 40 50 60 70 80 90 mKIAA0 PNQQQNYQGIVGVQSPQSQSLMGGQPNSTGPHIQGVVIPYPSVPSYQVSLPQGSQGIAHQ ::.::::::.::::.::::::.:::::: : .::::::::::::::::::::.::::::: gi|739 PNHQQNYQGLVGVQQPQSQSLVGGQPNSIGNQIQGVVIPYPSVPSYQVSLPQSSQGIAHQ 590 600 610 620 630 640 100 110 120 130 140 150 mKIAA0 TYQQPVVFPNQSNQGSLPTTGMPVYYSVIPPGQQSNLSSAVGYLQHPGSEQVQFPRTTSP ::::::.:::::::::.:::::::::::::::::.::::.:::::::::::::::::::: gi|739 TYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSP 650 660 670 680 690 700 160 170 180 190 200 210 mKIAA0 CSSQQLQGHQCAAVPQQPPGGGMVMMQLNLPNNPQSRTHSPPQWKQNKHYCDHQRGQKCM :.:::::.::::::: ::::::::::::.:::::::.::::::::::.::::::::::. gi|739 CNSQQLQSHQCAAVPPPPPGGGMVMMQLNVPNNPQSRAHSPPQWKQNKYYCDHQRGQKCV 710 720 730 740 750 760 220 230 240 250 260 270 mKIAA0 DFSNMDNIVQPSPQLSSPILSPVQSPAPAQLSTLKTIRPSGPPLSIMSQFARPFVPGQGD .:::.::::: ::::::::.::.::::::::.::::.:::::::::. ::.::::::::: gi|739 EFSNVDNIVQHSPQLSSPIISPAQSPAPAQLTTLKTVRPSGPPLSIIPQFSRPFVPGQGD 770 780 790 800 810 820 280 290 300 310 320 330 mKIAA0 ARYPLLGQPLQYNPPTLLHGHIPHQQGQSGSRHGNRGRRQAKKAASTDLGAGEAVVGKVL :::::::::::::::..:::::: ::::::.:::::::.::::::::::::::::::::: gi|739 ARYPLLGQPLQYNPPAVLHGHIPTQQGQSGNRHGNRGRKQAKKAASTDLGAGEAVVGKVL 830 840 850 860 870 880 340 350 360 370 380 390 mKIAA0 EITELPDGITRVEAEKLFGELFKIGAKIRWLRDPQSQPQLRRHALCCGSGDNTVNPEHSK :::::::::::.::::::::::::::::::::::::::::::: ::::::::.::::.:: gi|739 EITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPQLRRHPLCCGSGDNAVNPERSK 890 900 910 920 930 940 400 410 420 430 440 450 mKIAA0 PSDLASTYTVLATFPSISAAQSALKKQIHSVNKFKLRMSKKHYDFHILERASSQ :::::::::::::::::::::.::::::.:::::::: :::::::::::::::: gi|739 PSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ 950 960 970 980 990 1000 453 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 13:32:03 2009 done: Thu Mar 12 13:38:51 2009 Total Scan time: 918.400 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]