Comparison of KIAA cDNA sequences between mouse and human (FLJ00199)
<<Original sequence data>>
mouse mFLJ00199 (mbg01512) length: 5121 bp, CDS: 1622 - 2701
human (sj03574) length: 4348 bp, CDS: 2 - 1153
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 69 - 1623 493 261 34.6
CDS: 1624 - 2040 248 45 15.4
3'UTR: 2041 - 5613 1986 900 31.2
amino acid
CDS: 1624 - 2040 68 71 51.1
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mbg01512 1 CTTTTTGCCACAGCCCTTGGGACTGTGGCCTTGGCCCTGGCTGCCCACCA 50
sj03574 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
K K K L
mbg01512 51 GCTGAAAAGGCGCCGGCGGAAGAAGAAGCAGGTGGGCCCTGAGATGGGAG 100
|||| ||| ||
sj03574 1 ..................GAAGGAGACGC..................... 11
K E T L
101 ----+----*----+----*----+----*----+----*----+----* 150
P I L M A R K V
mbg01512 101 GTGAGCAGCTGGGCACGGTGCCCATGCCCATCCTCATGGCCCGCAAGGTC 150
||||| ||| || | |||
sj03574 12 ........................TGCCCTTCCGCAGCGATGGCATCCCG 37
P F R S D G I P
151 ----+----*----+----*----+----*----+----*----+----* 200
P S V R E P L A S E
mbg01512 151 CCTTCGGTGAAGAAAGGTAGGTATGTGGTTGGGGAGCCTCTGGCATCTGA 200
|| | || ||| ||||||| || ||
sj03574 38 GCTCTGTGGA.....................GGGGCCCTCTGGTATGTGT 66
A L W R G P L V C V
201 ----+----*----+----*----+----*----+----*----+----* 250
S L L S R
mbg01512 201 GTCACTTCTCAGCAGCATTCGCTGTGGGTCTCAGGCTCGTGCCTTCCCAC 250
||| || | | |
sj03574 67 GTCCCTGTCCTTCTG................................... 81
S L S F W
251 ----+----*----+----*----+----*----+----*----+----* 300
mbg01512 251 CTCACAGCTAAGTTACCCTCAGTAGACAGCAGAACAGACACTGGGCTCAG 300
sj03574 82 .................................................. 82
301 ----+----*----+----*----+----*----+----*----+----* 350
R G V G P
mbg01512 301 GTGTGGTGCGCGGCGTTGGTCCTGGGTGTCCTTCTTACTGTAGGGAATTT 350
| ||| | |||| |
sj03574 82 .......GGGCGTGGATGGTGC............................ 96
G V D G A
351 ----+----*----+----*----+----*----+----*----+----* 400
R N K D A E L V N T
mbg01512 351 CCCCAAGCTCAGGAATAAAGATGCGGAGCTCGTGAACACACTGGTGTGGT 400
| || | || || | | |||| ||
sj03574 97 .........CTGGGACCCAGCTGGCAACCAGTTGAAGAC........... 126
W D P A G N Q L K T
401 ----+----*----+----*----+----*----+----*----+----* 450
F S S *
mbg01512 401 GTGTCTCTGTTCTCCTCTTAAATGGGAGAGGAGGGATTTGGGTGTGGTAA 450
|||||||| ||
sj03574 127 ........GTTCTCCTTGGAA............................. 139
F S L E
451 ----+----*----+----*----+----*----+----*----+----* 500
mbg01512 451 GATTCGCCTTTTTAGTGTGTCCGGAACATTGAGACAGTGCCATCACAGAA 500
sj03574 140 .................................................. 140
501 ----+----*----+----*----+----*----+----*----+----* 550
D L G V C V
mbg01512 501 CTGAGCCACTGTGGGAAAACTTTGAAAAAGTTGATCTTGGAGTTTGTGTG 550
| |||||| | |
sj03574 140 ................................GCTCTTGGCCCTGAGGAC 157
A L G P E D
551 ----+----*----+----*----+----*----+----*----+----* 600
R A K V C G C A V A L W R S E G
mbg01512 551 AGAGCAAAGGTGTGTGGGTGTGCCGTAGTACACTGTGGAGGTCAGAGGGC 600
|| || ||| |||| | | | | ||||| | |||||
sj03574 158 TTTGCCTGGGGCATTGGCCCTGCCATGG..CGTTCCGGAGGGCCGAGGG. 204
F A W G I G P A M A F R R A E G
601 ----+----*----+----*----+----*----+----*----+----* 650
M C K F L P L S L V G S G V
mbg01512 601 AACTTGCATGTGTAAGTTCTTGCCTCTTTCACTTGTGGGTTCTGGGGTCA 650
|| || || | || | | || | | || | | | ||
sj03574 205 ......CACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATC. 247
T S M I Q A L A M T V A E I
651 ----+----*----+----*----+----*----+----*----+----* 700
mbg01512 651 TGCTGAGGCCTGGGCTCATCTTGCCGGCCCTCGTGAGACCCAGTTGTTTG 700
sj03574 248 .................................................. 248
701 ----+----*----+----*----+----*----+----*----+----* 750
mbg01512 701 CTACCGGTCACTGTCACGTTGCTCTCCTTCAAAGCAAGGCGCTCTCATAG 750
sj03574 248 .................................................. 248
751 ----+----*----+----*----+----*----+----*----+----* 800
mbg01512 751 GTTCACAACTTGGGAAAAACAAGTTTCCTTGGAAAATAAATGTTTAAAGC 800
sj03574 248 .................................................. 248
801 ----+----*----+----*----+----*----+----*----+----* 850
T V C P * S K M G Q
mbg01512 801 CAGGTGTGATACTGTGTGCCCGTAATCCTAGCACTTGGGAAGATGGGGCA 850
| |||| || ||| | || | | |||||
sj03574 248 ..........CCCGTGTTCCTGTACAC...........GACGTTTGGGCA 276
P V F L Y T T F G Q
851 ----+----*----+----*----+----*----+----*----+----* 900
mbg01512 851 GGTGTAGAACTTAAGGCCACTGTGGGCTACACACTGAGACTTTGTCTCAA 900
|
sj03574 277 G................................................. 277
901 ----+----*----+----*----+----*----+----*----+----* 950
mbg01512 901 AAAAATCAAAACTAATTAAGGAGAATGAGGTTTACGGGCTGTTTTATCTA 950
sj03574 278 .................................................. 278
951 ----+----*----+----*----+----*----+----*----+----* 1000
I V R S A P W C T * G D Q G L
mbg01512 951 TTTATTGTACGCTCTGCGCCATGGTGTACGTGAGGTGATCAG.AGGGCCT 999
|| | ||| || | ||| ||| ||| | | | | |||
sj03574 278 ...TCTGCATTCTCCCAGCTACGGTTGACGCCAGGCCTGCGGAAAGTCCT 324
S A F S Q L R L T P G L R K V L
1001 ----+----*----+----*----+----*----+----*----+----* 1050
S A P G I G S L
mbg01512 1000 CTCTGATTCACCGGGAATTGGGTCTCTCCTTCATTGAGGATTGAACCCAG 1049
|| || | ||| | ||| || |
sj03574 325 CTTTG...CCACGGCCCTGGGGACTGT....................... 348
F A T A L G T V
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S F G L E F P Y L L K H L * K
mbg01512 1050 GTCCTTCGGCCTGGTAGCAAGTTCCCTTACCTGCTGAAGCATCTGTAAAA 1099
| || | | ||||| || | ||| || || | | |
sj03574 349 GGCCCTGGCCCTGG.....CTGGCCACCAGCTGAAGAGGCGACGGAGGAG 393
A L A L A G H Q L K R R R R R
1101 ----+----*----+----*----+----*----+----*----+----* 1150
N V Q L S K R * G G
mbg01512 1100 GAACGTTCTTTATCAATCACTCAGGCAAACTGAGTAAGAGGTAGGGAGGT 1149
||| | | | || | ||||||
sj03574 394 GAAGAAGC...................AGGTTGGTCCCGAGATGGGAGGG 424
K K Q V G P E M G G
1151 ----+----*----+----*----+----*----+----*----+----* 1200
D P P C S Q P V P L L W A
mbg01512 1150 GACCCGCCTTGCTCTCAGCCTGTCCCAGCGTTTGGGGCCCTCCTATGGGC 1199
|| | || || | ||| ||| | |||| | |||
sj03574 425 GAGCAGCTGGGCACGGTGCCCCTCC............CTATCCTCTTGGC 462
E Q L G T V P L P I L L A
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbg01512 1200 CTGGCCTTGTGTTAAGCCAGCAGGCAAAGGAAAAGCCTTAGTCCTCTGTT 1249
|
sj03574 463 C................................................. 463
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbg01512 1250 AAGTGTACACACTCAGAGGAATCCACTGGTGTCCTGGCTTAGGTCAGGAC 1299
sj03574 464 .................................................. 464
1301 ----+----*----+----*----+----*----+----*----+----* 1350
R E A P W E D
mbg01512 1300 ACTCTTCCCGAAAGATAAGGATGGGAGGGAGGCTCCGTGGGAGGATGAAT 1349
||| ||| || | | | |
sj03574 464 .........................AGGAAGGTCCCTTCAGTGAA..... 483
R K V P S V K
1351 ----+----*----+----*----+----*----+----*----+----* 1400
T G C S S R R V Q S
mbg01512 1350 GTGAGACCCACCCTTCTCCTCACAGGCTGCTCCAGCAGGAGGGTTCAGAG 1399
| ||| | ||||||| |||| || |||||
sj03574 484 ....................GAAAGGATACTCCAGCCGGAGAGTCCAGAG 513
K G Y S S R R V Q S
1401 ----+----*----+----*----+----*----+----*----+----* 1450
P S S K S N D T L S G I S S I E P
mbg01512 1400 CCCCAGCAGCAAGAGCAACGACACTCTTAGTGGCATCTCCTCCATCGAGC 1449
|||||||||||||||||||||||| || ||||||||||| ||||| ||||
sj03574 514 CCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGC 563
P S S K S N D T L S G I S S I E P
1451 ----+----*----+----*----+----*----+----*----+----* 1500
S K H S G S S H S L A S M V V V
mbg01512 1450 CCAGCAAGCACTCAGGCTCCTCCCACAGCCTGGCCTCGATGGTAGTGGTC 1499
||||||||||||| |||||||||||||| ||||||||||| | | ||
sj03574 564 CCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGCAGTG 613
S K H S G S S H S V A S M M A V
1501 ----+----*----+----*----+----*----+----*----+----* 1550
N S S S P T A A C S G S W E A R G
mbg01512 1500 AATTCATCCAGCCCTACAGCTGCGTGCTCAGGTTCATGGGAAGCCCGAGG 1549
|| ||||||||||| ||||| |||||||| || |||||| ||| ||||
sj03574 614 AACTCATCCAGCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCAGAGG 663
N S S S P T A A C S G L W D A R G
1551 ----+----*----+----*----+----*----+----*----+----* 1600
M E E S V P T T D G S A E S L Y V
mbg01512 1550 GATGGAGGAGTCTGTGCCCACCACTGATGGCAGTGCCGAGAGCCTCTATG 1599
||||||||||||| || |||||| || |||| ||| |||||||| ||
sj03574 664 GATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACA 713
M E E S L T T S D G N A E S L Y M
1601 ----+----*----+----*----+----*----+----*----+----* 1650
Q G M E L F E E A L Q K W E Q A
mbg01512 1600 TGCAAGGCATGGAGCTGTTTGAGGAAGCCCTGCAGAAATGGGAGCAGGCA 1649
|||||||||||||||||||||||||||| |||||||| ||||||||||||
sj03574 714 TGCAAGGCATGGAGCTGTTTGAGGAAGCTCTGCAGAAGTGGGAGCAGGCA 763
Q G M E L F E E A L Q K W E Q A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L S V G Q R G D G G S T P T P G D
mbg01512 1650 CTGAGTGTGGGCCAGAGAGGGGATGGAGGCAGCACCCCCACACCAGGCGA 1699
|| || ||||||||| | ||||| | ||||||||||||| || | ||
sj03574 764 CTAAGCGTGGGCCAGCGGGGGGACAGCGGCAGCACCCCCATGCCCAGGGA 813
L S V G Q R G D S G S T P M P R D
1701 ----+----*----+----*----+----*----+----*----+----* 1750
S L Q N P D T A S E A L S -
mbg01512 1700 CAGCCTCCAGAACCCAGACACCGCATCAGAAGCACTGTCAG......... 1740
| |||||| ||||||||| || |||||||| ||||||| |
sj03574 814 CGGCCTCCGGAACCCAGAGACTGCATCAGAGCCACTGTCTGAGACGGAGT 863
G L R N P E T A S E P L S E T E S
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbg01512 1741 .................................................. 1741
sj03574 864 CTCACTCTGTTGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAGTGC 913
H S V A R L E C S G A I S A Q C
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbg01512 1741 .................................................. 1741
sj03574 914 AACCTCCGCTTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGT 963
N L R F L G S R D S P A S A S Q V
1851 ----+----*----+----*----+----*----+----*----+----* 1900
R V P T K G V C * E A G
mbg01512 1741 ................AGAGTCCCAACGAAGGGAGTTTGCTGAGAAGCTG 1774
|||||| || || | ||||||||| |||||||||
sj03574 964 AGCTGGGATTACAGCCAGAGTCACAGCGGAAGGAGTTTGCAGAGAAGCTG 1013
A G I T A R V T A E G V C R E A G
1901 ----+----*----+----*----+----*----+----*----+----* 1950
V P A A P G L P P A G R V W L Y
mbg01512 1775 GAGTCCCTGCTGCACCGGGCCTACCACCTGCAGGAAGAGTTTGGCTCTAC 1824
||||||||||||||||| ||||||||||||||||| ||||| ||||| ||
sj03574 1014 GAGTCCCTGCTGCACCGTGCCTACCACCTGCAGGAGGAGTTCGGCTCCAC 1063
V P A A P C L P P A G G V R L H
1951 ----+----*----+----*----+----*----+----*----+----* 2000
L P L * Q H A V G S * E D P N A A
mbg01512 1825 CTTCCCCTCTGACAGCATGCTGTTGGATCTTGAGAGGACCCTAATGCTGC 1874
||||||| | |||||||||||| | || || ||||||||||| |||||||
sj03574 1064 CTTCCCCGCAGACAGCATGCTGCTAGACCTCGAGAGGACCCTCATGCTGC 1113
L P R R Q H A A R P R E D P H A A
2001 ----+----*----+----*----+----*----+----*----+----* 2050
T D * G L T A T S S * R *
mbg01512 1875 CACTGACTGAGGGCTCACTGCGACTTCGAGCTGACGATGAGGACAGCCTG 1924
| ||||| |||||||| ||||| || || || ||||||||||||||||||
sj03574 1114 CCCTGACCGAGGGCTCGCTGCGGCTGCGGGCGGACGATGAGGACAGCCTG 1163
P D R G L A A A A G G R *
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbg01512 1925 ACCTCTGAAGACTCCTTTTTCTCAGCCACTGAGATCTTTGAGTCCCTGCA 1974
|| || || || ||||| ||||| ||||| ||| ||||||||||||||||
sj03574 1164 ACTTCAGAGGATTCCTTCTTCTCCGCCACCGAGCTCTTTGAGTCCCTGCA 1213
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbg01512 1975 GATCGGCGAGTACCCGCTTCCTCTCTCCAGGCCTGCTGCTGCCTACGAGG 2024
|| || || |||||| | || |||||||| || || |||||||| ||||
sj03574 1214 GACTGGAGATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCTATGAGG 1263
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbg01512 2025 AGGCTCTGCAGCTGGTGAAGGAAGGAAGAGTCCCTTGCCGAACACTCAGG 2074
|||| ||||||||||||||||| || ||||| |||||||| || ||||||
sj03574 1264 AGGCCCTGCAGCTGGTGAAGGAGGGGAGAGTGCCTTGCCGGACCCTCAGG 1313
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbg01512 2075 ACAGAGCTGCTGGGCTGCTACAGTGACCAGGACTTCCTAGCCAAGCTGCA 2124
|| |||||||||||||||||||||||||||||||| || |||||||||||
sj03574 1314 ACGGAGCTGCTGGGCTGCTACAGTGACCAGGACTTTCTGGCCAAGCTGCA 1363
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbg01512 2125 TTGTGTACGGCAGGCCTTTGAGGGGCTTCTAGAAGAAAGAAGCAACCAGA 2174
||||| ||||||||||| ||||||||||| ||||| | || ||||||
sj03574 1364 CTGTGTGCGGCAGGCCTTCGAGGGGCTTCTGGAAGACAAGAGTAACCAGC 1413
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbg01512 2175 TCTTCTTTGGGGAGGTCGGCCGGCAGATGGTGACGGGCCTGATGACCAAG 2224
| ||||| ||| | || ||||| ||||||||||| |||||||||||||||
sj03574 1414 TTTTCTTCGGGAAAGTGGGCCGACAGATGGTGACAGGCCTGATGACCAAG 1463
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbg01512 2225 GCTGAGAAGAGTCCCAAAGGCTTCCTGGAGAGCTATGAGGAGATGCTGAG 2274
||||||||||| ||||||||||||||||||||||| ||||||||||||||
sj03574 1464 GCTGAGAAGAGCCCCAAAGGCTTCCTGGAGAGCTACGAGGAGATGCTGAG 1513
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbg01512 2275 CTACGCCCTGCGGCCTGAGACCTGGGCTACCACCCGGCTGGAGCTGGAGG 2324
||| ||||||||||| ||||||||||| || || ||||||||||||||||
sj03574 1514 CTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGG 1563
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbg01512 2325 GCAGAGGGGTGGCCTGCATGAGCTTCTTCGACATCGTGCTGGACTTCATC 2374
|| ||||||||| ||||||||||||||||||||||||||||||||||||
sj03574 1564 GCCGAGGGGTGGTATGCATGAGCTTCTTCGACATCGTGCTGGACTTCATC 1613
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbg01512 2375 CTCATGGATGCCTTTGAGGACCTAGAGAACCCTCCGTCTTCGGTGCTTGC 2424
|||||||| ||||| |||||||| |||||||||||| | |||||||| ||
sj03574 1614 CTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGC 1663
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbg01512 2425 TGTCCTGAGGAACCGCTGGCTGTCTGACAGCTTCAAAGAAACAGTGGGTC 2474
|||||| |||||||||||||||| ||||||||||| || || |||||||
sj03574 1664 CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGTGGGTC 1713
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbg01512 2475 CTGTCCCTCCCGTCCCTTTCCTGGGACCTTGGGCACTGGTCCTCTTGTGT 2524
|||| | || | |||| | | | | |
sj03574 1714 ACTGCCCTGCTCTCAGACCC............ACACTTGCTCACATCAGC 1751
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbg01512 2525 CCCTGCCCACTGAGATGTGGGATGTCAGACCCGGGGCTCTCTGCAGGCAC 2574
|| || || || | | | | | | |||||
sj03574 1752 CCGTG.............TGGTTGCCTGGCTCCGTCCCCTCTG....... 1781
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbg01512 2575 TCGGGCGCTTCCTGCTGCCCCAGCTCCAGCAGTGTGCACATCTCCCTCTG 2624
| | |||| ||
sj03574 1782 ......................TCCCTAGCACTG................ 1793
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbg01512 2625 TGTTGTCCTCACATGGGCAGAGCCCCCACTCTGGTCAGGCACTAAGTCAT 2674
||| |||| | |||||||| |
sj03574 1794 ........GCACCAGGGCTGGGCCCCCAC.................CCCC 1818
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbg01512 2675 TCATTTTACTGCACCCCATTAAGTTAAAATAGAGAACGTCTACCCACCCA 2724
| | | || || | | | ||| |||| |||
sj03574 1819 TAGATCCGCGGCTGCCAGGCCTGGGAGACCAGA....GTCTGCCCTGGAG 1864
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbg01512 2725 CCCCCAACAAAATGACAAGAAACTCCAAGGCCCCCAATAATATGGTGGTG 2774
|| || || | | || | || ||| | ||
sj03574 1865 AAGCCTCCAGGGTGCCCCGTTGCTGCCTGGTGCCCCAGTTTAGAACCAAC 1914
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbg01512 2775 CTGGTGCCCACAGCTCTTCTCCAGCTAGGCCATTCATAGGTACTCATGAT 2824
||||| | | | || | || | | | || ||
sj03574 1915 ATGGTGTGCGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCT...... 1958
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbg01512 2825 GGCTCCCAACCACCAAGTGAGGGATGGGTGGGGTGCTGTGTCATGGCCAT 2874
|| ||| | | | | | | | ||
sj03574 1959 ....................GGTATGAATTCGATTCCATTTTAATGCATC 1988
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbg01512 2875 TTTACAGAAGAGGAAACAGGCTTGGAAACCTCCACATCCAAATGGAGTTC 2924
| | | | | | | | ||||| | || |
sj03574 1989 CTGTTAAATCAAGTTAAAAGAGGGGAAAGCAAAAC..............C 2024
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbg01512 2925 TAAAGCAGTAAAAGTCAGAGCCTGGATTCAAGAATAGGTGTGTATAGAGT 2974
|||| | ||||| || || || ||||
sj03574 2025 AAAAGGAAAAAAAGGCACAGAGTG.....................AGAGA 2053
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbg01512 2975 GAAGTCGGCTTAGCAAGTAACAGTGCTCACTGCCCCTGAGAAGGACCCAG 3024
|| | || || | |||| | | | | |||
sj03574 2054 CAACCCAGCACAGGA................CCCCCAGGAAGGCAAGCAG 2087
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbg01512 3025 CTTGGCTCCTAATGC.........CTACATGGTTCAGAGCTGGCCAGGTG 3065
||||| || || | ||| | ||| | |
sj03574 2088 TAACGCTCCAGCAGCCGGGCTGTGCTGCCTGGGCCCAGGCTTCTGCGAGG 2137
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbg01512 3066 GTGGGTGCTGGCACACACCTTTAGTCTCAGCACTCCGGTGGCAGAGGCAG 3115
| | | ||| ||| || || || || | || ||| |
sj03574 2138 TGGTTTACAGGCGGGAACCATTGCTCCCACAACCAC.....CAAAGGAGG 2182
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbg01512 3116 GCGGATCTCTGAGTTGGAGGCCTATAAAGTAAGTTCCAGGACAGCCAGGG 3165
||| ||| |||| ||| || || | |||| | | |||
sj03574 2183 TGGGAGTGCTGTGTTGTGCCCCTTTACAGAA.....GAGGAGACCGAGGC 2227
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbg01512 3166 CTACACAGAGAAACCCTGTATTGAAAAAAACAAAACAAAAAATTAGGCA. 3214
| | | | ||| | | ||| | || ||||| |
sj03574 2228 TCAGAGAAGATCCAGCAGTAAGATTAGAGTCAAGATTCAAGTTTAGGTAT 2277
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbg01512 3215 .TCTGTTGCCAAATTTAGGGAAAATAAAAAGCAAGACTTGTGCAGTTAGG 3263
|||| ||||| | || | | || |||| ||| ||| |
sj03574 2278 GTCTGAGTCCAAAATCAGAG.GAGGAAGCAGCAGAGCTTAGGCACCT... 2323
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbg01512 3264 TGTGGGTGGGCTATGGGGAGAGCTCATTCTGGGCCAGGGCTGGGGCCCTG 3313
|||||
sj03574 2324 ...........................................GGCCCCA 2330
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbg01512 3314 ACTTAGACTAGTCTAACTCCAGGATGGGGTCTTGCCTGTGTTTTAGGCCC 3363
||| || | ||| || ||||
sj03574 2331 TCTT..............CCTGCTTGGAGTGGGGCCT............. 2353
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbg01512 3364 TAGCCACCGCGTGCTGGTCTGTCCTGAAAGCCAAGAGGAGGCTCCTGATG 3413
| ||||| || |||||||| ||||||||||||||||||||||| ||||||
sj03574 2354 TGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGATG 2403
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbg01512 3414 GTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCATGTTAG 3463
||||||||||||||||||||||||||||||||||||||||||||||| ||
sj03574 2404 GTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCATGTGAG 2453
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbg01512 3464 CCCTGTGTTGGCCTTTGGCTT.CCTCGGACCCAAGC.CCCAGCTCTCGGA 3511
|||||| | ||||| ||||| ||| |||||||||| | ||||| | ||
sj03574 2454 CCCTGTCCTAGCCTTCGGCTTCCCTTGGACCCAAGCACTCAGCTTGCTGA 2503
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbg01512 3512 AGTCTGTGCTTTCTTCAAGCACCAGATTGTACAATACCTGAGGGACATGT 3561
|||||||||||||||||||||||||||||| || ||||||||||||||||
sj03574 2504 AGTCTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCTGAGGGACATGT 2553
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbg01512 3562 TCGACCTGGACAACGTGCGCTACACATCTGTGCCAGCCCTAGCAGAAGAC 3611
||||||||||||| ||||||||||| || |||| || || ||||| |||
sj03574 2554 TCGACCTGGACAATGTGCGCTACACGTCACTGCCCGCGCTGGCAGACGAC 2603
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbg01512 3612 ATCCTACAGCTGTCCCGGCGGCGCAGCGAGATTCTATTGGGCTACCTGGG 3661
||||| |||||||||||||| ||||||||||| | |||| ||||||||
sj03574 2604 ATCCTGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGGGGTACCTGGG 2653
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbg01512 3662 GGCACCTGTGGCTAGTAGCATCGGGCTGAATGGGCCACTGCCTCGAGAAA 3711
|| || | ||| || ||| || |||||||| | ||||| ||||| |
sj03574 2654 GGTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGGGCGCTGCCCCGAGAGA 2703
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbg01512 3712 ATGGGCCCCTGGAAGAGCTGCAGTA.ACAGGGGATGGGCTGGAGGGGAGA 3760
|||||||||||| ||||||||||| | || | ||||||| |||
sj03574 2704 ATGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGGGCTGGGGGG.... 2749
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbg01512 3761 GGTGGCTGTTTGGGCCTCAGATACAAGGTGATAGGAGAGAGAAAGCTGCC 3810
| | |||||||| ||| |
sj03574 2750 ...............................TGGCAGAGAGAAGGCTCCT 2768
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbg01512 3811 ACTCCCTTCCTTTGGGTTGGTATCCAAGGGCCATGGTGGCCAAGGGCCAT 3860
||||||||| |||||||||||| | || ||||||| |||||| |
sj03574 2769 CCTCCCTTCC.CTGGGTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGT 2817
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbg01512 3861 TGCCCCTAAGCTTGCTCCACTTCC.TCACCTGGGAATTCCCAACACCCAG 3909
||||||| | |||| |||| || ||| |||||| | ||||| |||||
sj03574 2818 TGCCCCTGACTTTGCCCCACCCCCATCATCTGGGAGTCCCCAAGGCCCAG 2867
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbg01512 3910 GGGACAAATTTCCATGGAGAGGAACCACTAGAAGCACTGATAGCAGCTGC 3959
|| | ||||||||||||| ||||
sj03574 2868 AGGGGACATTTCCATGGAGAAGAAC......................... 2892
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbg01512 3960 CCTTGGGGTTCCCTGAGCAGCAGAGGCAGGCCAGAGTCAGCAGGGACTG. 4008
|| | | | | ||||| ||||||| ||| ||| |||
sj03574 2893 .....GGTTCCTGGGGGAAGCAG....AGGCCAGGACCAGTGGGGCCTGT 2933
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbg01512 4009 GCCAGGGGCAGGTAGCAAGAGAGAAAGGTGTGGGAGCAAAT......... 4049
| || | ||| | |||||| | ||| | | |||
sj03574 2934 GGGAGAGAAAGGCTGTGAGAGAGGGGGTTGTTGTGGAGAATTGGGACAGG 2983
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbg01512 4050 ...........GGCTCTTGAGTATGGACCACAGAAC..CCCAGTCCCCCC 4086
|| | | ||||| || ||| |||| | ||
sj03574 2984 CAGAGCCAGGATGCCCCAGGTGGGGGACCCCAAAACCTCCCATCGCTCCA 3033
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbg01512 4087 CTGCTGCTGA.....GGGAGGGCAAGGGATAGTTGAGGGATAGAACATAC 4131
|||||||| | | || | || || ||| |||| | | ||
sj03574 3034 GGGCTGCTGACAAGGGTGCTGGGAGGGTGGAGGTGAAGGATGGGGCCTAG 3083
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbg01512 4132 AGGGCTAGGTGGTGACAGTCACAGGGTCCTGCAATTAGCAGCCACCAATA 4181
|| || ||||||| ||||||| |||||| | ||| ||||||| |
sj03574 3084 AGCCCT..GTGGTGAAGGTCACAGTGTCCTG.AGCTAGAAGCCACCTGTG 3130
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbg01512 4182 GCTACATTAAGTCCCAGCACCTAGGCTTCTGGCCAGTATGGAAAGC.... 4227
|||| || ||| ||||| | || |||||| || || |
sj03574 3131 GCTATAT..GGTCTCAGCATCCAG....CTGGCCTGTCCTGATGCCCTCC 3174
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbg01512 4228 .................................................. 4228
sj03574 3175 CCACCTCAACCGCCTTCTCAGAGAGTTTGCAACTCCAGAGAAGGAGAGTG 3224
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbg01512 4228 ...................CATGTCTGGGCCATC...........CAGAG 4247
|| | |||||||||| |||||
sj03574 3225 GGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCAGAG 3274
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbg01512 4248 GTGGGCTTGCCCCATGTGTGCTCACATCTGAGCAGGTACTCACCCTTCAC 4297
|||||| | || ||||||| | |||||||||| | | || |
sj03574 3275 GTGGGCCTCCCAATCCTGTGCTCTCTTCTGAGCAGGAAATGGGCCCTTGG 3324
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbg01512 4298 AAACCCTTGGCGCTGTTCTCCACATTCCCACACCCTGCCAAAGATTGTTT 4347
||| | | | | |||||| | |||| |||||||||| |
sj03574 3325 AAA........GTGTTCTTTGAAATTCCCTCGCCCTAACAAAGATTGTCT 3366
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbg01512 4348 T......TATCCCCTCTGTCACCAAAGATGGAGGAGGCAGGACTGGCCGC 4391
| | | |||||||||||| | | || | ||| ||| |
sj03574 3367 TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGG 3416
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbg01512 4392 TTCCTGCT................CTCTGGTGAGCCAGGAGCT.CCTGGG 4424
||| || || |||||| || || ||||||
sj03574 3417 GCCCTCCTGCCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCCCTGGG 3466
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbg01512 4425 CAGTGCTGGGCCCCAGTCAGAGCTCACAG........TGGCCCATCTACT 4466
||||| ||| | | | | | ||| | || || |
sj03574 3467 TGGTGCTAGGCTCTGAGCTGGGGGCTCAGACCAGGGATCGCTCAGGCCCC 3516
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbg01512 4467 GCTCCAAAAGTGAGCACGGAACCATGGCAGGGTGGGCATGGGCTGCA... 4513
|| | | || |||| ||| || || || || |
sj03574 3517 TGTCACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGT 3566
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbg01512 4514 .CAGCGGGCAGCTCCCCCTTCCCCTTTCTGACAGGAAGCTGGACTCAGCA 4562
| ||||| |||| | | || |||| ||| ||| | |||||
sj03574 3567 GGCCGGACCAGCTTCCCCACCTTCATTAGGACAAGAAACTG..CCCAGCA 3614
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbg01512 4563 CTTTGCCTTCAACTCCATGCACACGTGCT............TTGGGGCTG 4600
||||||||||| || | ||||| ||| | ||||| |
sj03574 3615 CTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAG 3664
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbg01512 4601 CCACCACCCACGTCCTGCAGA.....CAGTTGGCATTTGTCACGGCAGCT 4645
| ||| | |||||||| | ||| ||| | |
sj03574 3665 AGCCTCCCCTGGGCCTGCAGAGAGTCCTGTTAGCAGCGACGTCCCCCCGC 3714
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbg01512 4646 GCAGTAGTCCTGGCAGCCC................TCCTTTTGCCTGAGC 4679
| |||||| |||||| | || |||||||
sj03574 3715 CGCGGGGTCCTGTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGC 3764
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbg01512 4680 TGGGAAGTTTTTATTTATTGCCTTAATACTTTATTTGGCTGTTCCATCCC 4729
| | | | | ||| || | || | | | || ||
sj03574 3765 GAG........TGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCT 3806
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbg01512 4730 TTCCAGGTTGTGACACCAGGAG....AAAAGACTCCTGGTCTGGAGTT.. 4773
|||||||||| || || | || || | ||||| |||| ||
sj03574 3807 TTCCAGGTTGAGAGGCCTGCAGGAGAAACACACTCCCCTCCTGGGTTTCC 3856
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbg01512 4774 ...............GAGCACTGGCTCCTGGAACCA.AGTTCCTCTCCCT 4807
||| ||||||||||| |||| | ||||||||
sj03574 3857 ACACTCAGGAGGTCAGAGGACTGGCTCCTGTGACCAGGGCCCCTCTCCCC 3906
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbg01512 4808 GGAAGGGAAAAGGGTTCCCCAGGGTCAGCAGGATGCAGTAAAGAGAGG.. 4855
||| || |||||| | | ||| | ||| ||| | |||||||
sj03574 3907 TGAATGGGAAAGGGGT..CTGGGGATGGGAGGGCGCACCACAGAGAGGAG 3954
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbg01512 4856 ...............................................GCA 4858
| |
sj03574 3955 ATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGA 4004
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mbg01512 4859 GCCAT.GGCTCTGGGTCCTCTCTGAGGCTTGTGCTCAGAAGGGAGCAGC. 4906
|||| ||| || | ||| ||||| ||| | | ||| ||| |
sj03574 4005 TCCATGGGCACTAACCCGCCTCCCAGGCTGATGC.CCGGAGGCAGCTTCC 4053
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mbg01512 4907 .................................................. 4907
sj03574 4054 TGGGCAGGAGGGTTCCATGGGCACTAACCCACCTCCCAGGCTGATGCCTG 4103
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mbg01512 4907 ..................................CCTCATGCACTGTCTT 4922
|| | | | || |
sj03574 4104 GAGGCAGCCTCCAGGGCAGGAAGGACCCTGTGCTCCCCGCCCCCCATCCT 4153
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mbg01512 4923 GACATTCCATTCATTTGCACTTACCCTGAGCTGTGAATGTGACCCTGGGC 4972
||||| | ||| ||||||||||||||| ||||||||||| || |||||
sj03574 4154 GACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGC 4203
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mbg01512 4973 TAAGGCCTGCTCTGCTCTGCCCCTGACCCATACAGTGTGGTATTTTCATT 5022
|| || |||| | | | | |||||||||
sj03574 4204 ................CTTGGCCCCGCCCACTCTGATTTGCATTTTCATT 4237
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mbg01512 5023 TTTGTCCTGTTCATGTGTCTATGCCCCACCCTCTAGCACTCAACCAGCA. 5071
| ||| |||| | || ||| | | ||| ||||| || | ||
sj03574 4238 TGTGT.TTGTTTACACATCCATG.CACTGCCTGTAGCAGTCGATTGTCAC 4285
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mbg01512 5072 ...............GTGGTAGAGTGTGTGTAAGGCCTGTGAGTCAGATA 5106
|||||||||||||| | | ||||||||| |||
sj03574 4286 AGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAATA 4335
5601 ----+----*----+ 5615
mbg01512 5107 AAGGACCGAAGCGAC 5121
|| | || ||
sj03574 4336 AACAATTGAGACG.. 4348