FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0558.ptfa, 1098 aa vs ./tmplib.26680 library 1767919 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.4884+/-0.00426; mu= 19.2010+/- 0.287 mean_var=87.5513+/-19.917, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.1371 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1573 ( 857 res) mph02104 ( 857) 142 39 0.0038 >>mKIAA1573 ( 857 res) mph02104 (857 aa) initn: 149 init1: 123 opt: 142 Z-score: 148.8 bits: 39.0 E(): 0.0038 Smith-Waterman score: 411; 22.652% identity (26.580% ungapped) in 724 aa overlap (96-751:49-733) 70 80 90 100 110 120 mKIAA0 LVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIMYYDAKADAELDDPE .: .:. : .... . .:. :.: .: mKIAA1 TMQRIFNSLVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNK-QVVEASYTAHLTSPL 20 30 40 50 60 70 130 140 150 160 170 180 mKIAA0 SEDMERGSKTSALRLDFIEDPNFKNKVNYSYTAVQIPTDIYKGSTVILNELNWTEALENV . .. . .. ..: : ::...:. . . .. : :: .: . :..: mKIAA1 TAIQDCCTIPPSM-MEF--DGNFNTNVSRTVSCDRLST------TVNSRAFNPGRDLNSV 80 90 100 110 120 190 200 210 220 230 240 mKIAA0 FIENRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGAS-SPKDMV . .: ...: . :: :.: :. .:: .: . :. : :: :.. . . : .: mKIAA1 LADNLKSNPGIKWQYFSSEEGIFTVFPAHKFRCKGS---YEHRSRPIYVSTVRPQSKHIV 130 140 150 160 170 180 250 260 270 280 290 300 mKIAA0 IIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVS---CF-THLVQAN .:.: ..::. :.. : .. .:..... : ..: . . .. : :. :.: :. mKIAA1 VILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADAVRTCSLDQCYKTYLSPAT 190 200 210 220 230 240 310 320 330 340 350 mKIAA0 VRNKKVFKEAVQGMVAKGT-TGYKAGFEYAFDQLQN-SNITRANCNK-MIMMFTDGG--- ..:. .. :... . . : . .::. ::. ... :: :: . : :.... ..: mKIAA1 SETKRKMSTFVSSVKPSDSPTQHAVGFHRAFQLIRSTSNSTRFQANTDMVIIYLSAGITS 250 260 270 280 290 300 360 370 380 390 400 mKIAA0 -----EDR---VQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMAC------TNKGYY ::. .. . :. .. : .: ..:... : :: :. .: :.: : mKIAA1 KDSSEEDKKATLRVINEENGFLNNSVMILTYAL--MNDGVTGLKELAFLRDLAEQNSGKY 310 320 330 340 350 360 410 420 430 440 450 mKIAA0 -----FEIPSI-GAIRI-NTQEYLDV-LGRPMV-LAGKDAKQVQWTNVYEDALGLGLVVT .: : :.. . : :.. .:: .. : .. .. .. . : .: ::..: mKIAA1 GIPDRTALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMT 370 380 390 400 410 420 460 470 480 490 500 510 mKIAA0 GTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPNYTLGANGYVFAIDLNGYVLL . : . ..:.::..:.:: : : . . : . .:.: :: .::.:. mKIAA1 VSKPCYF----------GNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLM 430 440 450 460 470 520 530 540 550 560 mKIAA0 HPNL-KPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGDKGHKQIRTLVKS------- ::.: .: . . :. :.. : . . : .:..... : . : . :.: mKIAA1 HPSLTRPYLLS-EPPLHTDIIHYE-NIPKFELVRQNILSLPLGSQIITVPVNSSLSWHIN 480 490 500 510 520 530 570 580 590 600 mKIAA0 -LDERYIDEVIRNYTWVPIRSTNYSLGLVL----------------PPYSTYYLQANLSD : : . .:.: ...:.. : .:. : . : . .: mKIAA1 KLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLG 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 QILQVKYFEFLL----PSSFESEGHVFIAPREYCKDLNAS---DNNTEFLKNFIELMEKV : .:. : :. . : : : .: :. .. ... .. : .:.. .:. . mKIAA1 QPSACLHFKQLATLESPTVMLSAGS-FSSPYEHLSQPETKRMVEHYTAYLSDNTRLI--A 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 TPDSKQCNNFLLHNLILDTG-ITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKA .: : : ..: .. :. .:.. . .. . ..:::: .. . :: .:. :..:.. mKIAA1 NPGLK----FSVRNEVMATSHVTDEWMTQM-EMSSLNTY-IVRRYIATPNGVLRIYPGSL 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA0 AEDWTENPEPFNASFYRRSLDNHGYI-FKPPHQDSLLRPLELENDTVGVLVSTAVELSLG . . .: ..: ... : : : . :. : mKIAA1 MD---KAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHT 710 720 730 740 750 780 790 800 810 820 830 mKIAA0 RRTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKQCGPSSHCEMDCEVNNEDLLCVL mKIAA1 VAVMRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLVDPKGHAPLEQQHITHK 760 770 780 790 800 810 1098 residues in 1 query sequences 1767919 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:23:05 2006 done: Mon Mar 27 10:23:06 2006 Scan time: 1.020 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]