# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg01068.fasta.nr -Q ../query/mKIAA0988.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0988, 352 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921221 sequences Expectation_n fit: rho(ln(x))= 5.0308+/-0.00018; mu= 10.6156+/- 0.010 mean_var=65.0286+/-12.530, 0's: 40 Z-trim: 43 B-trim: 0 in 0/67 Lambda= 0.159046 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148702894|gb|EDL34841.1| tubulin-specific chape (1171) 2112 493.5 9e-137 gi|81875711|sp|Q8BYA0.1|TBCD_MOUSE RecName: Full=T (1196) 2112 493.5 9.2e-137 gi|148702895|gb|EDL34842.1| tubulin-specific chape (1228) 2112 493.5 9.4e-137 gi|109512868|ref|XP_343650.3| PREDICTED: similar t ( 647) 2064 482.3 1.2e-133 gi|149055135|gb|EDM06952.1| rCG35584 [Rattus norve (1172) 2064 482.5 1.9e-133 gi|109492428|ref|XP_001081857.1| PREDICTED: simila (1197) 2064 482.5 1.9e-133 gi|114671159|ref|XP_001168951.1| PREDICTED: beta-t ( 623) 1750 410.3 5.5e-112 gi|114671147|ref|XP_001169003.1| PREDICTED: beta-t (1175) 1750 410.4 9.1e-112 gi|24901261|gb|AAH39654.1| TBCD protein [Homo sapi ( 623) 1744 408.9 1.4e-111 gi|6599136|emb|CAB63716.1| hypothetical protein [H (1050) 1744 409.0 2.2e-111 gi|168269606|dbj|BAG09930.1| tubulin-specific chap (1192) 1744 409.1 2.4e-111 gi|74733154|sp|Q9BTW9.1|TBCD_HUMAN RecName: Full=T (1192) 1744 409.1 2.4e-111 gi|149758748|ref|XP_001490265.1| PREDICTED: simila (1217) 1739 407.9 5.4e-111 gi|38196938|gb|AAH12824.2| TBCD protein [Homo sapi ( 387) 1733 406.2 5.6e-111 gi|41350333|ref|NP_005984.3| beta-tubulin cofactor (1192) 1733 406.5 1.4e-110 gi|154426042|gb|AAI51339.1| TBCD protein [Bos taur (1172) 1717 402.9 1.7e-109 gi|75039487|sp|Q28205.1|TBCD_BOVIN RecName: Full=T (1199) 1717 402.9 1.8e-109 gi|74013299|ref|XP_548804.2| PREDICTED: similar to ( 946) 1703 399.6 1.4e-108 gi|224074845|ref|XP_002193290.1| PREDICTED: tubuli (1143) 1565 368.0 5.4e-99 gi|189516859|ref|XP_001922584.1| PREDICTED: tubuli (1188) 1439 339.1 2.8e-90 gi|111305929|gb|AAI21492.1| Tubulin folding cofact (1156) 1414 333.3 1.5e-88 gi|209156178|gb|ACI34321.1| Tubulin-specific chape (1193) 1377 324.9 5.4e-86 gi|223648078|gb|ACN10797.1| Tubulin-specific chape (1193) 1365 322.1 3.6e-85 gi|47215401|emb|CAG01098.1| unnamed protein produc ( 774) 1264 298.8 2.4e-78 gi|114671145|ref|XP_001168838.1| PREDICTED: beta-t (1213) 1242 293.9 1.1e-76 gi|114671149|ref|XP_001168814.1| PREDICTED: beta-t (1248) 1242 293.9 1.2e-76 gi|114671153|ref|XP_001168632.1| PREDICTED: beta-t (1077) 1240 293.4 1.4e-76 gi|3850044|emb|CAA07022.1| beta-tubulin cofactor D (1248) 1204 285.2 5e-74 gi|119610228|gb|EAW89822.1| tubulin-specific chape ( 659) 1083 257.2 6.8e-66 gi|119610227|gb|EAW89821.1| tubulin-specific chape ( 705) 1083 257.2 7.2e-66 gi|119610229|gb|EAW89823.1| tubulin-specific chape (1133) 1083 257.4 1e-65 gi|19483906|gb|AAH24992.1| Tbcd protein [Mus muscu ( 151) 996 236.8 2.1e-60 gi|156214005|gb|EDO35005.1| predicted protein [Nem (1125) 992 236.5 2e-59 gi|114671151|ref|XP_001168909.1| PREDICTED: beta-t (1149) 971 231.7 5.8e-58 gi|10732608|gb|AAG22470.1|AF193042_1 unknown [Homo ( 184) 919 219.2 5.2e-55 gi|194675664|ref|XP_001789593.1| PREDICTED: simila ( 556) 845 202.6 1.6e-49 gi|114671155|ref|XP_511771.2| PREDICTED: beta-tubu (1024) 773 186.2 2.5e-44 gi|210102962|gb|EEA51004.1| hypothetical protein B ( 912) 764 184.1 9.5e-44 gi|91091872|ref|XP_969240.1| PREDICTED: similar to (1150) 763 184.0 1.3e-43 gi|56755565|gb|AAW25961.1| unknown [Schistosoma ja ( 284) 737 177.6 2.7e-42 gi|198422973|ref|XP_002130261.1| PREDICTED: simila (1188) 728 175.9 3.6e-41 gi|212513790|gb|EEB16223.1| tubulin-specific chape (1196) 724 175.0 6.8e-41 gi|110764384|ref|XP_001121704.1| PREDICTED: simila (1097) 682 165.4 5.1e-38 gi|210106955|gb|EEA54914.1| hypothetical protein B ( 734) 668 162.0 3.4e-37 gi|115725328|ref|XP_791372.2| PREDICTED: hypotheti ( 208) 652 158.0 1.6e-36 gi|54644970|gb|EAL33710.1| GA20218 [Drosophila pse (1193) 654 159.0 4.7e-36 gi|194106854|gb|EDW28897.1| GL18704 [Drosophila pe (1193) 651 158.3 7.5e-36 gi|156547361|ref|XP_001603120.1| PREDICTED: simila (1099) 641 156.0 3.5e-35 gi|193912240|gb|EDW11107.1| GI15724 [Drosophila mo (1188) 629 153.2 2.5e-34 gi|190615811|gb|EDV31335.1| GF14602 [Drosophila an (1186) 626 152.5 4e-34 >>gi|148702894|gb|EDL34841.1| tubulin-specific chaperone (1171 aa) initn: 2112 init1: 2112 opt: 2112 Z-score: 2611.8 bits: 493.5 E(): 9e-137 Smith-Waterman score: 2112; 100.000% identity (100.000% similar) in 323 aa overlap (30-352:849-1171) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE :::::::::::::::::::::::::::::: gi|148 CKENISEVYAALLGCMSDYTTDSRGDVGAWVREAAMTSLMDLMLLLARTEPVLIEAHICE 820 830 840 850 860 870 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN 880 890 900 910 920 930 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ 940 950 960 970 980 990 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 1000 1010 1020 1030 1040 1050 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 1060 1070 1080 1090 1100 1110 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS 1120 1130 1140 1150 1160 1170 >>gi|81875711|sp|Q8BYA0.1|TBCD_MOUSE RecName: Full=Tubul (1196 aa) initn: 2112 init1: 2112 opt: 2112 Z-score: 2611.7 bits: 493.5 E(): 9.2e-137 Smith-Waterman score: 2112; 100.000% identity (100.000% similar) in 323 aa overlap (30-352:874-1196) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE :::::::::::::::::::::::::::::: gi|818 CKENISEVYAALLGCMSDYTTDSRGDVGAWVREAAMTSLMDLMLLLARTEPVLIEAHICE 850 860 870 880 890 900 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN 910 920 930 940 950 960 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ 970 980 990 1000 1010 1020 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 1030 1040 1050 1060 1070 1080 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 1090 1100 1110 1120 1130 1140 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS 1150 1160 1170 1180 1190 >>gi|148702895|gb|EDL34842.1| tubulin-specific chaperone (1228 aa) initn: 2112 init1: 2112 opt: 2112 Z-score: 2611.5 bits: 493.5 E(): 9.4e-137 Smith-Waterman score: 2112; 100.000% identity (100.000% similar) in 323 aa overlap (30-352:906-1228) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE :::::::::::::::::::::::::::::: gi|148 CKENISEVYAALLGCMSDYTTDSRGDVGAWVREAAMTSLMDLMLLLARTEPVLIEAHICE 880 890 900 910 920 930 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN 940 950 960 970 980 990 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ 1000 1010 1020 1030 1040 1050 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 1060 1070 1080 1090 1100 1110 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 1120 1130 1140 1150 1160 1170 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS 1180 1190 1200 1210 1220 >>gi|109512868|ref|XP_343650.3| PREDICTED: similar to tu (647 aa) initn: 2064 init1: 2064 opt: 2064 Z-score: 2556.0 bits: 482.3 E(): 1.2e-133 Smith-Waterman score: 2064; 96.904% identity (99.690% similar) in 323 aa overlap (30-352:325-647) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::::.::::::::::::.:::::::::::: gi|109 CQENISEVYAALLGCMSDYTTDSRGDVGAWVREASMTSLMDLMLLLAQTEPVLIEAHICE 300 310 320 330 340 350 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|109 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRKELESLFPRSDVATVNWN 360 370 380 390 400 410 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|109 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLE 420 430 440 450 460 470 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 480 490 500 510 520 530 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::.::::::.::::::::::::::::::::::::::::::: gi|109 KSKDIQKLRSSIAVLCGMVQFSGDVRKKVLLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 540 550 560 570 580 590 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :::::::::::::::::::::.:::::: :::.::::::::::::::::.::: gi|109 DLVDAEVLDEVMSVLSDTAWDSELPVVRGQRNHLCDLLGVPRPQLVPKPVPGS 600 610 620 630 640 >>gi|149055135|gb|EDM06952.1| rCG35584 [Rattus norvegicu (1172 aa) initn: 2064 init1: 2064 opt: 2064 Z-score: 2552.3 bits: 482.5 E(): 1.9e-133 Smith-Waterman score: 2064; 96.904% identity (99.690% similar) in 323 aa overlap (30-352:850-1172) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::::.::::::::::::.:::::::::::: gi|149 CQENISEVYAALLGCMSDYTTDSRGDVGAWVREASMTSLMDLMLLLAQTEPVLIEAHICE 820 830 840 850 860 870 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|149 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRKELESLFPRSDVATVNWN 880 890 900 910 920 930 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|149 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLE 940 950 960 970 980 990 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 1000 1010 1020 1030 1040 1050 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::.::::::.::::::::::::::::::::::::::::::: gi|149 KSKDIQKLRSSIAVLCGMVQFSGDVRKKVLLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 1060 1070 1080 1090 1100 1110 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :::::::::::::::::::::.:::::: :::.::::::::::::::::.::: gi|149 DLVDAEVLDEVMSVLSDTAWDSELPVVRGQRNHLCDLLGVPRPQLVPKPVPGS 1120 1130 1140 1150 1160 1170 >>gi|109492428|ref|XP_001081857.1| PREDICTED: similar to (1197 aa) initn: 2064 init1: 2064 opt: 2064 Z-score: 2552.1 bits: 482.5 E(): 1.9e-133 Smith-Waterman score: 2064; 96.904% identity (99.690% similar) in 323 aa overlap (30-352:875-1197) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::::.::::::::::::.:::::::::::: gi|109 CQENISEVYAALLGCMSDYTTDSRGDVGAWVREASMTSLMDLMLLLAQTEPVLIEAHICE 850 860 870 880 890 900 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|109 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRKELESLFPRSDVATVNWN 910 920 930 940 950 960 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|109 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLE 970 980 990 1000 1010 1020 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK 1030 1040 1050 1060 1070 1080 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS :::::::::::::::::::::.::::::.::::::::::::::::::::::::::::::: gi|109 KSKDIQKLRSSIAVLCGMVQFSGDVRKKVLLQLFLLLGHPFPVIRKSTASQVYEMVLTYS 1090 1100 1110 1120 1130 1140 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :::::::::::::::::::::.:::::: :::.::::::::::::::::.::: gi|109 DLVDAEVLDEVMSVLSDTAWDSELPVVRGQRNHLCDLLGVPRPQLVPKPVPGS 1150 1160 1170 1180 1190 >>gi|114671159|ref|XP_001168951.1| PREDICTED: beta-tubul (623 aa) initn: 1750 init1: 1750 opt: 1750 Z-score: 2166.8 bits: 410.3 E(): 5.5e-112 Smith-Waterman score: 1750; 82.445% identity (93.730% similar) in 319 aa overlap (30-348:302-620) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::.::::::::: :::::..: :::::::: gi|114 CRENVSQIYCALLGCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHICE 280 290 300 310 320 330 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :.:::::::::::::::::::: ::::::::::::::::::: :::.::::::::.:::. gi|114 RIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWS 340 350 360 370 380 390 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ ::::::: ::::::::::::::::::.::.:::::::.:::::::::::::::.: :.: gi|114 APSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALG 400 410 420 430 440 450 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK ::: :::..:::::::.:::: ::: ::..:..:::::::.::.::: ::::.:::.::: gi|114 SFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIK 460 470 480 490 500 510 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS .::::::: :.:::.:::::: ::::.. :::: ::: : ::.:::.::::::: .:::: gi|114 NSKDIQKLLSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYS 520 530 540 550 560 570 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :.: :.:::::..::::::::::: ::::::::::::::::::::::.: gi|114 DVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC 580 590 600 610 620 >>gi|114671147|ref|XP_001169003.1| PREDICTED: beta-tubul (1175 aa) initn: 1750 init1: 1750 opt: 1750 Z-score: 2162.9 bits: 410.4 E(): 9.1e-112 Smith-Waterman score: 1750; 82.445% identity (93.730% similar) in 319 aa overlap (30-348:854-1172) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::.::::::::: :::::..: :::::::: gi|114 CRENVSQIYCALLGCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHICE 830 840 850 860 870 880 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :.:::::::::::::::::::: ::::::::::::::::::: :::.::::::::.:::. gi|114 RIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWS 890 900 910 920 930 940 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ ::::::: ::::::::::::::::::.::.:::::::.:::::::::::::::.: :.: gi|114 APSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALG 950 960 970 980 990 1000 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK ::: :::..:::::::.:::: ::: ::..:..:::::::.::.::: ::::.:::.::: gi|114 SFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIK 1010 1020 1030 1040 1050 1060 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS .::::::: :.:::.:::::: ::::.. :::: ::: : ::.:::.::::::: .:::: gi|114 NSKDIQKLLSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYS 1070 1080 1090 1100 1110 1120 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :.: :.:::::..::::::::::: ::::::::::::::::::::::.: gi|114 DVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC 1130 1140 1150 1160 1170 >>gi|24901261|gb|AAH39654.1| TBCD protein [Homo sapiens] (623 aa) initn: 1744 init1: 1744 opt: 1744 Z-score: 2159.4 bits: 408.9 E(): 1.4e-111 Smith-Waterman score: 1744; 82.132% identity (93.417% similar) in 319 aa overlap (30-348:302-620) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::.::::::::: :::::..: ::::: :: gi|249 CGENVSQIYCALLGCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCE 280 290 300 310 320 330 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :.:::::::::::::::::::: ::::::::::::::::::: :::.::::::::.:::. gi|249 RIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWS 340 350 360 370 380 390 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ ::::::: ::::::::::::::::::.::.:::::::.:::::::::::::::.: :.: gi|249 APSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALG 400 410 420 430 440 450 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK ::: :::..:::::::.:::: ::: ::..:..:::::::.::.::: ::::.:::.::: gi|249 SFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIK 460 470 480 490 500 510 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS .::::::: :.:::.:::::: ::::.. :::: ::: : ::.:::.::::::: .:::: gi|249 NSKDIQKLLSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYS 520 530 540 550 560 570 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :.: :.:::::..::::::::::: ::::::::::::::::::::::.: gi|249 DVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC 580 590 600 610 620 >>gi|6599136|emb|CAB63716.1| hypothetical protein [Homo (1050 aa) initn: 1744 init1: 1744 opt: 1744 Z-score: 2156.1 bits: 409.0 E(): 2.2e-111 Smith-Waterman score: 1744; 82.132% identity (93.417% similar) in 319 aa overlap (30-348:729-1047) 10 20 30 40 50 mKIAA0 AACRVWLVDPGRAWTPCHRLTFSCFLIHRVREAAMTSLMDLMLLLARTEPVLIEAHICE ::.::::::::: :::::..: ::::: :: gi|659 CGENVSQIYCALLGCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCE 700 710 720 730 740 750 60 70 80 90 100 110 mKIAA0 RVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWN :.:::::::::::::::::::: ::::::::::::::::::: :::.::::::::.:::. gi|659 RIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWS 760 770 780 790 800 810 120 130 140 150 160 170 mKIAA0 APSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQ ::::::: ::::::::::::::::::.::.:::::::.:::::::::::::::.: :.: gi|659 APSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALG 820 830 840 850 860 870 180 190 200 210 220 230 mKIAA0 SFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIK ::: :::..:::::::.:::: ::: ::..:..:::::::.::.::: ::::.:::.::: gi|659 SFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIK 880 890 900 910 920 930 240 250 260 270 280 290 mKIAA0 KSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYS .::::::: :.:::.:::::: ::::.. :::: ::: : ::.:::.::::::: .:::: gi|659 NSKDIQKLLSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYS 940 950 960 970 980 990 300 310 320 330 340 350 mKIAA0 DLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS :.: :.:::::..::::::::::: ::::::::::::::::::::::.: gi|659 DVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC 1000 1010 1020 1030 1040 1050 352 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 10:44:28 2009 done: Tue Mar 17 10:50:33 2009 Total Scan time: 834.930 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]