# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg00671.fasta.nr -Q ../query/mKIAA1399.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1399, 471 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7912854 sequences Expectation_n fit: rho(ln(x))= 5.7242+/-0.000198; mu= 9.9817+/- 0.011 mean_var=106.7249+/-20.570, 0's: 28 Z-trim: 50 B-trim: 322 in 2/66 Lambda= 0.124148 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|125987840|sp|Q80TE3.3|MARH4_MOUSE RecName: Full ( 409) 2933 535.8 8e-150 gi|109486240|ref|XP_001074008.1| PREDICTED: simila ( 409) 2827 516.8 4.2e-144 gi|149710122|ref|XP_001490009.1| PREDICTED: membra ( 411) 2676 489.7 5.8e-136 gi|74005706|ref|XP_545636.2| PREDICTED: similar to ( 523) 2652 485.5 1.4e-134 gi|114583204|ref|XP_526023.2| PREDICTED: membrane- ( 411) 2641 483.5 4.5e-134 gi|194664312|ref|XP_001789546.1| PREDICTED: simila ( 409) 2634 482.2 1.1e-133 gi|59798475|sp|Q9P2E8.2|MARH4_HUMAN RecName: Full= ( 410) 2622 480.1 4.7e-133 gi|149234074|ref|XP_001477280.1| PREDICTED: simila ( 412) 2405 441.2 2.4e-121 gi|29179408|gb|AAH48793.1| MARCH4 protein [Homo sa ( 357) 2253 413.9 3.4e-113 gi|126337860|ref|XP_001363894.1| PREDICTED: simila ( 419) 2176 400.2 5.3e-109 gi|118093789|ref|XP_422071.2| PREDICTED: similar t ( 403) 1638 303.8 5.3e-80 gi|224054728|ref|XP_002191218.1| PREDICTED: simila ( 367) 1621 300.7 4.1e-79 gi|148667866|gb|EDL00283.1| mCG146944 [Mus musculu ( 171) 1323 247.0 2.8e-63 gi|123787316|sp|Q3TZ87.1|MARH9_MOUSE RecName: Full ( 348) 1302 243.6 6.2e-62 gi|149261559|ref|XP_001473620.1| PREDICTED: hypoth ( 308) 1284 240.3 5.3e-61 gi|148692517|gb|EDL24464.1| mCG5187 [Mus musculus] ( 245) 1240 232.3 1.1e-58 gi|123914442|sp|Q0P496.1|MARH4_DANRE RecName: Full ( 421) 1210 227.2 6.5e-57 gi|33990634|gb|AAH56494.1| March4 protein [Mus mus ( 185) 1196 224.3 2.1e-56 gi|183985994|gb|AAI66307.1| LOC100127869 protein [ ( 332) 1175 220.8 4.2e-55 gi|76618798|ref|XP_872323.1| PREDICTED: similar to ( 346) 1173 220.5 5.6e-55 gi|126343808|ref|XP_001364464.1| PREDICTED: simila ( 346) 1170 219.9 8.1e-55 gi|150445755|dbj|BAF68986.1| membrane-associated R ( 346) 1169 219.7 9.2e-55 gi|74759533|sp|Q86YJ5.2|MARH9_HUMAN RecName: Full= ( 346) 1165 219.0 1.5e-54 gi|29791835|gb|AAH50397.1| MARCH9 protein [Homo sa ( 489) 1165 219.2 1.9e-54 gi|119617470|gb|EAW97064.1| membrane-associated ri ( 278) 1154 217.0 5e-54 gi|194212314|ref|XP_001488841.2| PREDICTED: simila ( 255) 1151 216.4 6.9e-54 gi|125852404|ref|XP_001339845.1| PREDICTED: simila ( 342) 1136 213.8 5.5e-53 gi|47220684|emb|CAG11753.1| unnamed protein produc ( 201) 1108 208.6 1.2e-51 gi|55963380|emb|CAI11866.1| novel protein [Danio r ( 378) 1108 208.9 1.9e-51 gi|47226326|emb|CAG09294.1| unnamed protein produc ( 257) 1017 192.4 1.2e-46 gi|49522196|gb|AAH74436.1| LOC443709 protein [Xeno ( 226) 1005 190.2 4.7e-46 gi|73968558|ref|XP_538253.2| PREDICTED: similar to ( 257) 1002 189.7 7.5e-46 gi|160773653|gb|AAI55517.1| LOC100127869 protein [ ( 228) 1000 189.3 8.8e-46 gi|189523791|ref|XP_001920168.1| PREDICTED: simila ( 261) 973 184.5 2.8e-44 gi|126321063|ref|XP_001373305.1| PREDICTED: hypoth ( 439) 957 181.9 2.9e-43 gi|224045783|ref|XP_002187443.1| PREDICTED: simila ( 277) 944 179.4 1.1e-42 gi|194676651|ref|XP_001250236.2| PREDICTED: simila ( 400) 944 179.5 1.4e-42 gi|161760669|ref|NP_001095298.1| membrane-associat ( 398) 934 177.7 4.7e-42 gi|190359880|sp|Q8CBH7.2|MARHB_MOUSE RecName: Full ( 400) 931 177.2 6.9e-42 gi|190359826|sp|A6P320.1|MARHB_RAT RecName: Full=E ( 398) 926 176.3 1.3e-41 gi|190359893|sp|A6NNE9.3|MARHB_HUMAN RecName: Full ( 402) 922 175.6 2.1e-41 gi|149026473|gb|EDL82623.1| similar to hypothetica ( 361) 911 173.6 7.7e-41 gi|148676958|gb|EDL08905.1| mCG119668 [Mus musculu ( 363) 906 172.7 1.4e-40 gi|47228168|emb|CAF97797.1| unnamed protein produc ( 175) 876 167.0 3.5e-39 gi|125806915|ref|XP_001338632.1| PREDICTED: im:714 ( 339) 856 163.7 6.8e-38 gi|118086562|ref|XP_419001.2| PREDICTED: similar t ( 395) 854 163.4 9.7e-38 gi|109076788|ref|XP_001109958.1| PREDICTED: simila ( 246) 844 161.4 2.4e-37 gi|73954397|ref|XP_536522.2| PREDICTED: similar to ( 309) 841 160.9 4.1e-37 gi|149412818|ref|XP_001510994.1| PREDICTED: simila ( 280) 839 160.5 4.9e-37 gi|18044133|gb|AAH19560.1| March9 protein [Mus mus ( 213) 832 159.2 9.6e-37 >>gi|125987840|sp|Q80TE3.3|MARH4_MOUSE RecName: Full=E3 (409 aa) initn: 2936 init1: 1803 opt: 2933 Z-score: 2846.1 bits: 535.8 E(): 8e-150 Smith-Waterman score: 2933; 98.778% identity (99.022% similar) in 409 aa overlap (64-471:1-409) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWWCCCCGWYSCGLCTPAPQM :::::::::::::::::::::::::::::: gi|125 MLMPLGGLLWWWCCCCGWYSCGLCTPAPQM 10 20 30 100 110 120 130 140 150 mKIAA1 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGW 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 RGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 RGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLG 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 YHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQDL :::::::::::::::::::::::::: . ::::::::::::::::::::::::::::: gi|125 YHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQDL 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 LFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 LFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGR 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 TNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLRPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 TNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLRPH 340 350 360 370 380 390 460 470 mKIAA1 DQRSTQGSGRELVMRVTTV ::::::::::::::::::: gi|125 DQRSTQGSGRELVMRVTTV 400 >>gi|109486240|ref|XP_001074008.1| PREDICTED: similar to (409 aa) initn: 2010 init1: 2010 opt: 2827 Z-score: 2743.5 bits: 516.8 E(): 4.2e-144 Smith-Waterman score: 2827; 95.854% identity (97.317% similar) in 410 aa overlap (64-471:1-409) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWWCCCC-GWYSCGLCTPAPQ ::::::::::: :::: ::: ::::::::: gi|109 MLMPLGGLLWWCCCCCCGWYCCGLCTPAPQ 10 20 30 100 110 120 130 140 150 mKIAA1 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 WRGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSL :::::::::::::::::::::::: .::::::: :::::::::::::::::::::::::: gi|109 WRGPREAVGRETPPLPPPPPLPPSVEDDWDGPAIGPPASLLSSASSDEFCKEKTEDCYSL 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 GSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GS-LDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY 160 170 180 190 200 280 290 300 310 320 330 mKIAA1 KYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQD ::::::::::::::::::::::::::: . :::::::::::::::::::::::::::: gi|109 KYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQD 210 220 230 240 250 260 340 350 360 370 380 390 mKIAA1 LLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGG 270 280 290 300 310 320 400 410 420 430 440 450 mKIAA1 RTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLRP ::::::::::::..::.:::::::::::::: :::::::::::::::::::::::::::: gi|109 RTNLQTSSSAQASMPSTEEEAASPPAREEGPPRAASHPSGPVSQHHCAYTILHILSHLRP 330 340 350 360 370 380 460 470 mKIAA1 HDQRSTQGSGRELVMRVTTV :::::::::.:::::::::: gi|109 HDQRSTQGSSRELVMRVTTV 390 400 >>gi|149710122|ref|XP_001490009.1| PREDICTED: membrane-a (411 aa) initn: 2621 init1: 1598 opt: 2676 Z-score: 2597.3 bits: 489.7 E(): 5.8e-136 Smith-Waterman score: 2676; 89.781% identity (95.377% similar) in 411 aa overlap (64-471:1-411) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWW--CCCCGWYSCGLCTPAP :::::.:::::: ::::.:: ::::.::: gi|149 MLMPLSGLLWWWWCCCCCAWYPCGLCAPAP 10 20 30 100 110 120 130 140 150 mKIAA1 QMLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWA :::::::::::::::::::::::::::::::::::::::: ::.:::::::::::::::: gi|149 QMLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQPPGLAANNNTLPALGAGGWA 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 GWRGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS :::::::.::::::::::::::::: .::: : :: :::::.::::::.::: :.:: :: gi|149 GWRGPREGVGRETPPLPPPPPLPPSVEDDWGGTATEPPASLFSSASSDDFCKGKAEDRYS 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 YKYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQ :::::::::::::::::::::::::::: . ::::::::::::::::::::::::::: gi|149 YKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQ 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 GRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLR :::: .::::.::: :..::::.. :: ::::.:::::::::.:.::::::::::::::: gi|149 GRTNPRTSSSTQANAPASEEEATGTPAPEEGPARAASHPSGPLSDHHCAYTILHILSHLR 340 350 360 370 380 390 460 470 mKIAA1 PHDQRSTQGSGRELVMRVTTV ::.::. ::..:::::::::: gi|149 PHEQRTPQGGSRELVMRVTTV 400 410 >>gi|74005706|ref|XP_545636.2| PREDICTED: similar to mem (523 aa) initn: 1998 init1: 1020 opt: 2652 Z-score: 2572.7 bits: 485.5 E(): 1.4e-134 Smith-Waterman score: 2656; 82.781% identity (89.404% similar) in 453 aa overlap (41-471:71-523) 20 30 40 50 60 mKIAA1 SKRVIYLLLGGVIRRANKKGSSITQEHCGPQAPPY------PPLQRLQLPLS--SPLLPY : ::. ::. . : : .: : gi|740 HRRPRADSEQQEEGDHGPGAEEKAREPVRKQIPPHNTALLWTPLKTILLSSSEKTPAAPP 50 60 70 80 90 100 70 80 90 100 110 mKIAA1 -------HMLMPLGGLLWWW-----CCCCGWYSCGLCTPAPQMLRHQGLLKCRCRMLFND ::::::.:::::: ::::.:: ::::.:::::::::::::::::::::: gi|740 GLSASTGHMLMPLSGLLWWWWWCCCCCCCAWYRCGLCAPAPQMLRHQGLLKCRCRMLFND 110 120 130 140 150 160 120 130 140 150 160 170 mKIAA1 LKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGWRGPREAVGRETPPLPPP ::::::::::::::::::::: :..:::::::::::::::::::::::.::::: :::: gi|740 LKVFLLRRPPPAPLPMHGDPQPPSLAANNNTLPALGAGGWAGWRGPREGVGRETTPLPPA 170 180 190 200 210 220 180 190 200 210 220 mKIAA1 PPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLGSSLDSGMRTPLCRICF ::::::. .::: :::: ::.:::::::::.::: :.::::::::::::::::::::::: gi|740 PPLPPSSVEDDWGGPATEPPTSLLSSASSDDFCKGKAEDCYSLGSSLDSGMRTPLCRICF 230 240 250 260 270 280 230 240 250 260 270 280 mKIAA1 QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPLQWQA 290 300 310 320 330 340 290 300 310 320 330 340 mKIAA1 ISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQDLLFQICYGMYGFMDVVC :::::::::: . ::::::::::::::::::::::::::::::::::::::::::::: gi|740 ISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQDLLFQICYGMYGFMDVVC 350 360 370 380 390 400 350 360 370 380 390 400 mKIAA1 IGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGRTNLQTSSSAQANLPSA ::::.::::::::::::::::::::::::::::::::::::::::: .::::.::: :.. gi|740 IGLIVHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGRTNPRTSSSTQANAPAS 410 420 430 440 450 460 410 420 430 440 450 460 mKIAA1 EEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLRPHDQRSTQGSGRELVMRV :::.. :. ::::.:::::: ::.:.:::::::::::::::::.::: ::..::::::: gi|740 GEEAVGTPGAEEGPARAASHPPGPLSDHHCAYTILHILSHLRPHEQRSPQGGSRELVMRV 470 480 490 500 510 520 470 mKIAA1 TTV ::: gi|740 TTV >>gi|114583204|ref|XP_526023.2| PREDICTED: membrane-asso (411 aa) initn: 1912 init1: 1024 opt: 2641 Z-score: 2563.4 bits: 483.5 E(): 4.5e-134 Smith-Waterman score: 2641; 89.051% identity (94.891% similar) in 411 aa overlap (64-471:1-411) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWW-CCCCGWYSCGLCTPAPQ ::::: :::::: ::: ::: :::.:::: gi|114 MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ 10 20 30 100 110 120 130 140 150 mKIAA1 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG :::::::::::::::::::::::::::: :::::::::: ::.::::::::::::::::: gi|114 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNNTLPALGAGGWAG 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 WRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS ::::::.:::: ::.:::::::::. .::: :::: ::::::::::::.:::::::: :: gi|114 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 YKYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQ :::::::::::::::::::::::::::: . ::::::::::::::::::::::.:::: gi|114 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|114 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 GRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLR :::: .::::.:::.::.:::.:. :: :.::..::.:::::.:.::::::::::::::: gi|114 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR 340 350 360 370 380 390 460 470 mKIAA1 PHDQRSTQGSGRELVMRVTTV ::.::: ::.:::::::::: gi|114 PHEQRSPPGSSRELVMRVTTV 400 410 >>gi|194664312|ref|XP_001789546.1| PREDICTED: similar to (409 aa) initn: 2637 init1: 1627 opt: 2634 Z-score: 2556.7 bits: 482.2 E(): 1.1e-133 Smith-Waterman score: 2634; 88.753% identity (95.355% similar) in 409 aa overlap (64-471:1-409) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWWCCCCGWYSCGLCTPAPQM :::::.::: :: :::.:: :::::::::: gi|194 MLMPLSGLLRWWWCCCAWYCCGLCTPAPQM 10 20 30 100 110 120 130 140 150 mKIAA1 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGW :::::::::::::::::::::::::::::::::::.:: ::.:::::::::::::::::: gi|194 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGEPQPPGLAANNNTLPALGAGGWAGW 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 RGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLG :::::.:.::::::::::::::: .::: :::: ::. ::::::::.::: :.:: :::: gi|194 RGPREGVSRETPPLPPPPPLPPSVEDDWGGPATEPPVLLLSSASSDDFCKGKAEDRYSLG 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 YHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQDL :::::::::::::::::::::::::: . ::::::::::::::::::::::::::::: gi|194 YHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQDL 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 LFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGR ::::::::::::::::::::::::::::::::::::::::::::::::.::::.::.::: gi|194 LFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKAKDLEEQKTGGR 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 TNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLRPH :: .::::.::: :..:::::. :: ::::.:::.:::::.:.::::::::::::::::: gi|194 TNPRTSSSTQANAPTSEEEAAGTPAPEEGPARAAGHPSGPLSDHHCAYTILHILSHLRPH 340 350 360 370 380 390 460 470 mKIAA1 DQRSTQGSGRELVMRVTTV .::. ::..:::::::::: gi|194 EQRTPQGGSRELVMRVTTV 400 >>gi|59798475|sp|Q9P2E8.2|MARH4_HUMAN RecName: Full=E3 u (410 aa) initn: 2361 init1: 1351 opt: 2622 Z-score: 2545.1 bits: 480.1 E(): 4.7e-133 Smith-Waterman score: 2622; 88.808% identity (94.647% similar) in 411 aa overlap (64-471:1-410) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWW-CCCCGWYSCGLCTPAPQ ::::: :::::: ::: ::: :::.:::: gi|597 MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ 10 20 30 100 110 120 130 140 150 mKIAA1 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG :::::::::::::::::::::::::::: :::::::::: ::.:::: :::::::::::: gi|597 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG 40 50 60 70 80 160 170 180 190 200 210 mKIAA1 WRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS ::::::.:::: ::.:::::::::. .::: :::: ::::::::::::.:::::::: :: gi|597 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS 90 100 110 120 130 140 220 230 240 250 260 270 mKIAA1 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 150 160 170 180 190 200 280 290 300 310 320 330 mKIAA1 YKYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQRQ :::::::::::::::::::::::::::: . ::::::::::::::::::::::.:::: gi|597 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ 210 220 230 240 250 260 340 350 360 370 380 390 mKIAA1 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|597 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG 270 280 290 300 310 320 400 410 420 430 440 450 mKIAA1 GRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLR :::: .::::.:::.::.:::.:. :: :.::..::.:::::.:.::::::::::::::: gi|597 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR 330 340 350 360 370 380 460 470 mKIAA1 PHDQRSTQGSGRELVMRVTTV ::.::: ::.:::::::::: gi|597 PHEQRSPPGSSRELVMRVTTV 390 400 410 >>gi|149234074|ref|XP_001477280.1| PREDICTED: similar to (412 aa) initn: 2253 init1: 1355 opt: 2405 Z-score: 2335.0 bits: 441.2 E(): 2.4e-121 Smith-Waterman score: 2405; 80.288% identity (89.183% similar) in 416 aa overlap (64-471:1-412) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWWCCCCGWYSCGLCTPAPQM :::::::::::::::::::::::::::::: gi|149 MLMPLGGLLWWWCCCCGWYSCGLCTPAPQM 10 20 30 100 110 120 130 140 150 mKIAA1 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAGW 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 RGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RGPREAVGRETPPLPPPPPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLG 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTH-QPCLIKWISERGCWSCELCYY ::::::::::::::::::::: . : : :..:: ::..::. ::.: .:::. gi|149 SSLDSGMRTPLCRICFQGPEQVTVAVFCYCLLSLRCTTVLPCFVKWVCPFGCFSLKLCYM 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 KYHVIAISTKNPLQWQAISLTVIEKVQCSRHL-GSLFLIASISWLIWSTFSPSAKWQRQD : . ...::..:. .....:.::. :. . : : . . :: : ..: : .:.: : gi|149 KQQK---TSENPVSWKILNFNLIKKVKISQIISGEPFALPLLLWL-WPSLSASKSWSRLD 220 230 240 250 260 340 350 360 370 380 mKIAA1 LLFQICYG-MYGFMDVVCI-----GLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLE ::. : : ::.:...:. :::::::::::::::::::::::::::::::::::: gi|149 ELFSKCQGSTYGIMNILCLLLFLAGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLE 270 280 290 300 310 320 390 400 410 420 430 440 mKIAA1 DQKSGGRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DQKSGGRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHI 330 340 350 360 370 380 450 460 470 mKIAA1 LSHLRPHDQRSTQGSGRELVMRVTTV :::::::::::::::::::::::::: gi|149 LSHLRPHDQRSTQGSGRELVMRVTTV 390 400 410 >>gi|29179408|gb|AAH48793.1| MARCH4 protein [Homo sapien (357 aa) initn: 2022 init1: 1024 opt: 2253 Z-score: 2188.6 bits: 413.9 E(): 3.4e-113 Smith-Waterman score: 2253; 88.827% identity (95.251% similar) in 358 aa overlap (116-471:1-357) 90 100 110 120 130 140 mKIAA1 LCTPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPAL ::::: :::::::::: ::.:::: ::::: gi|291 LRRPPQAPLPMHGDPQPPGLAANN-TLPAL 10 20 150 160 170 180 190 200 mKIAA1 GAGGWAGWRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKE :::::::::::::.:::: ::.:::::::::. .::: :::: ::::::::::::.:::: gi|291 GAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKE 30 40 50 60 70 80 210 220 230 240 250 260 mKIAA1 KTEDCYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGC :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 KTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGC 90 100 110 120 130 140 270 280 290 300 310 320 mKIAA1 WSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSP ::::::::::::::::::::::::::::::::::: . :::::::::::::::::::: gi|291 WSCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSP 150 160 170 180 190 200 330 340 350 360 370 380 mKIAA1 SAKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 SARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD 210 220 230 240 250 260 390 400 410 420 430 440 mKIAA1 LEDQKSGGRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTIL :::::.::::: .::::.:::.::.:::.:. :: :.::..::.:::::.:.:::::::: gi|291 LEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTIL 270 280 290 300 310 320 450 460 470 mKIAA1 HILSHLRPHDQRSTQGSGRELVMRVTTV :::::::::.::: ::.:::::::::: gi|291 HILSHLRPHEQRSPPGSSRELVMRVTTV 330 340 350 >>gi|126337860|ref|XP_001363894.1| PREDICTED: similar to (419 aa) initn: 2037 init1: 779 opt: 2176 Z-score: 2113.2 bits: 400.2 E(): 5.3e-109 Smith-Waterman score: 2423; 80.668% identity (90.215% similar) in 419 aa overlap (64-471:1-419) 40 50 60 70 80 90 mKIAA1 TQEHCGPQAPPYPPLQRLQLPLSSPLLPYHMLMPLGGLLWWW-CCCCGWYSCGLCTPAPQ :::::.:.:::: :::: :: :: : ::: gi|126 MLMPLSGFLWWWWCCCCCWYCCGGCYQAPQ 10 20 30 100 110 120 130 140 150 mKIAA1 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG :.::::::::::::::::::::::::::::::::::::: ::.:::::::::::::::.: gi|126 MFRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQPPGLAANNNTLPALGAGGWVG 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 WRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS ::::::..: : ::::::::::::. .::: : .. ::::::::.:::.::: :.:: : gi|126 WRGPREGTGGEIPPLPPPPPLPPSSAEDDWGGQVVDPPASLLSSTSSDDFCKGKAEDPGS 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LGSSLDSGMRTPLCRICFQGPE-QGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC :::: ..:. .::: ::..:. .:::::::::::::::::::::::::::::::::::: gi|126 LGSSQQAGLDSPLCLTCFRAPRREGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC 160 170 180 190 200 210 280 290 300 310 320 mKIAA1 YYKYHVIAISTKNPLQWQAISLTVIEKVQCSRH-LGSLFLIASISWLIWSTFSPSAKWQR ::::::::::::::::::::::::::::: . :::::::::::::::::::::::::: gi|126 YYKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQR 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKS ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. gi|126 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDIEDQKA 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 GGRTNLQTSSSAQANLPSAEEEAASPPAREEGP-------TRAASHPSGPVSQHHCAYTI ::::: .::::.::. :.::::.. ::. .: .:: ::::::...::::::: gi|126 GGRTNPRTSSSTQADAASSEEEAVGNPAQGDGGGSGGGGGNRAPSHPSGPLADHHCAYTI 340 350 360 370 380 390 450 460 470 mKIAA1 LHILSHLRPHDQRSTQGSGRELVMRVTTV ::::::::::.::: :..:::::::::: gi|126 LHILSHLRPHEQRSPTGGNRELVMRVTTV 400 410 471 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 02:49:23 2009 done: Sat Mar 14 02:56:19 2009 Total Scan time: 934.600 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]